RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
TMED1-203ENST00000588259 PKIGQ9Y2B9 76 aa10.66□□□□□ -0.7
TMED1-203ENST00000588259 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
TMED1-203ENST00000588259 TRBV6-5A0A0K0K1A5 114 aa10.65□□□□□ -0.7
TMED1-203ENST00000588259 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
TMED1-203ENST00000588259 CT83Q5H943 113 aa10.65□□□□□ -0.7
TMED1-203ENST00000588259 EIF5A2Q9GZV4 153 aaKnown RBP10.65□□□□□ -0.7
TMED1-203ENST00000588259 A0A1B0GVG6 124 aa10.64□□□□□ -0.71
TMED1-203ENST00000588259 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
TMED1-203ENST00000588259 LINC00474Q9P2X8 69 aa10.64□□□□□ -0.71
TMED1-203ENST00000588259 C7orf77A4D0Y5 90 aa10.63□□□□□ -0.71
TMED1-203ENST00000588259 ZNF561-AS1K7EIQ3 104 aa10.63□□□□□ -0.71
TMED1-203ENST00000588259 ESDP10768 282 aa10.63□□□□□ -0.71
TMED1-203ENST00000588259 FCER1GP30273 86 aa10.63□□□□□ -0.71
TMED1-203ENST00000588259 TSKUQ8WUA8 353 aa10.63□□□□□ -0.71
TMED1-203ENST00000588259 UBR4Q5T4S7 5183 aa10.62□□□□□ -0.71
TMED1-203ENST00000588259 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
TMED1-203ENST00000588259 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
TMED1-203ENST00000588259 ZNF727A8MUV8 499 aa10.61□□□□□ -0.71
TMED1-203ENST00000588259 MALP21145 153 aa10.61□□□□□ -0.71
TMED1-203ENST00000588259 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
TMED1-203ENST00000588259 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
TMED1-203ENST00000588259 LINC01551Q86U37 167 aa10.61□□□□□ -0.71
TMED1-203ENST00000588259 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
TMED1-203ENST00000588259 SMKR1H3BMG3 65 aa10.6□□□□□ -0.71
TMED1-203ENST00000588259 MRPL52Q86TS9 123 aaKnown RBP10.6□□□□□ -0.71
TMED1-203ENST00000588259 CDC42SE2Q9NRR3 84 aa10.6□□□□□ -0.71
TMED1-203ENST00000588259 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
TMED1-203ENST00000588259 RAB4AP20338 218 aa10.59□□□□□ -0.71
TMED1-203ENST00000588259 CAMPP49913 170 aa10.59□□□□□ -0.71
TMED1-203ENST00000588259 POLR2KP53803 58 aaKnown RBP10.59□□□□□ -0.71
TMED1-203ENST00000588259 RIGQ13278 110 aa10.59□□□□□ -0.71
TMED1-203ENST00000588259 COX7A2LO14548 114 aa10.58□□□□□ -0.72
TMED1-203ENST00000588259 VCYO14598 125 aa10.58□□□□□ -0.72
TMED1-203ENST00000588259 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
TMED1-203ENST00000588259 ISOC2Q96AB3 205 aa10.58□□□□□ -0.72
TMED1-203ENST00000588259 FAM210AQ96ND0 272 aa10.58□□□□□ -0.72
TMED1-203ENST00000588259 OSTCQ9NRP0 149 aa10.58□□□□□ -0.72
TMED1-203ENST00000588259 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
TMED1-203ENST00000588259 GAGE2BQ13066 116 aa10.57□□□□□ -0.72
TMED1-203ENST00000588259 LINC01600Q96MT4 127 aa10.57□□□□□ -0.72
TMED1-203ENST00000588259 IGLV4-69A0A075B6H9 119 aa10.56□□□□□ -0.72
TMED1-203ENST00000588259 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
TMED1-203ENST00000588259 C1orf196B1AJZ1 125 aa10.56□□□□□ -0.72
TMED1-203ENST00000588259 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
TMED1-203ENST00000588259 KIR2DL4Q99706 377 aa10.56□□□□□ -0.72
TMED1-203ENST00000588259 LOC107984640A0A0U1RRK4 108 aa10.55□□□□□ -0.72
TMED1-203ENST00000588259 PPP1R17O96001 155 aa10.55□□□□□ -0.72
TMED1-203ENST00000588259 PTTG1IPP53801 180 aa10.55□□□□□ -0.72
TMED1-203ENST00000588259 SUMO2P61956 95 aaKnown RBP10.55□□□□□ -0.72
TMED1-203ENST00000588259 Q6ZRP5 223 aa10.55□□□□□ -0.72
TMED1-203ENST00000588259 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
TMED1-203ENST00000588259 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
TMED1-203ENST00000588259 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
TMED1-203ENST00000588259 ODF1Q14990 250 aa10.54□□□□□ -0.72
TMED1-203ENST00000588259 SPINK6Q6UWN8 80 aa10.54□□□□□ -0.72
TMED1-203ENST00000588259 V9GYV3 84 aa10.54□□□□□ -0.72
TMED1-203ENST00000588259 ADIRFQ15847 76 aa10.53□□□□□ -0.72
TMED1-203ENST00000588259 Q6ZUT4 128 aa10.53□□□□□ -0.72
TMED1-203ENST00000588259 C5orf38Q86SI9 138 aa10.53□□□□□ -0.72
TMED1-203ENST00000588259 NRACQ8N912 160 aa10.53□□□□□ -0.72
TMED1-203ENST00000588259 NAT8BQ9UHF3 227 aa10.53□□□□□ -0.72
TMED1-203ENST00000588259 UBE2D4Q9Y2X8 147 aa10.53□□□□□ -0.72
TMED1-203ENST00000588259 A0A0J9YXV3 536 aa10.52□□□□□ -0.73
TMED1-203ENST00000588259 PPP1R2P9O14990 202 aa10.52□□□□□ -0.73
TMED1-203ENST00000588259 RPL18AQ02543 176 aaKnown RBP10.52□□□□□ -0.73
TMED1-203ENST00000588259 TMEM241Q24JQ0 296 aa10.52□□□□□ -0.73
TMED1-203ENST00000588259 TMEM18Q96B42 140 aa10.52□□□□□ -0.73
TMED1-203ENST00000588259 APOMO95445 188 aa10.51□□□□□ -0.73
TMED1-203ENST00000588259 CSDC2Q9Y534 153 aaKnown RBP10.51□□□□□ -0.73
TMED1-203ENST00000588259 SPAG11BQ08648 103 aa10.5□□□□□ -0.73
TMED1-203ENST00000588259 MRPL51Q4U2R6 128 aaKnown RBP10.5□□□□□ -0.73
TMED1-203ENST00000588259 CKS2P33552 79 aa10.49□□□□□ -0.73
TMED1-203ENST00000588259 FAM104BQ5XKR9 115 aa10.49□□□□□ -0.73
TMED1-203ENST00000588259 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
TMED1-203ENST00000588259 MT-ND6P03923 174 aa10.48□□□□□ -0.73
TMED1-203ENST00000588259 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
TMED1-203ENST00000588259 FAM74A3Q4VXF1 159 aa10.48□□□□□ -0.73
TMED1-203ENST00000588259 C9orf116Q5BN46 136 aaPredicted RBP10.48□□□□□ -0.73
TMED1-203ENST00000588259 C2orf48Q96LS8 159 aa10.48□□□□□ -0.73
TMED1-203ENST00000588259 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
TMED1-203ENST00000588259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.47□□□□□ -0.73
TMED1-203ENST00000588259 RPL39P62891 51 aaKnown RBP10.47□□□□□ -0.73
TMED1-203ENST00000588259 TIMM21Q9BVV7 248 aa10.47□□□□□ -0.73
TMED1-203ENST00000588259 NAT8Q9UHE5 227 aa10.47□□□□□ -0.73
TMED1-203ENST00000588259 TNXBP22105 4242 aa10.47□□□□□ -0.73
TMED1-203ENST00000588259 SRSF9Q13242 221 aaKnown RBP eCLIP10.46□□□□□ -0.73
TMED1-203ENST00000588259 ORAOV1Q8WV07 137 aa10.46□□□□□ -0.73
TMED1-203ENST00000588259 C20orf78Q9BR46 151 aa10.46□□□□□ -0.73
TMED1-203ENST00000588259 A0A1B0GW15 77 aa10.45□□□□□ -0.74
TMED1-203ENST00000588259 SMIM27A0A1W2PRY6 76 aa10.45□□□□□ -0.74
TMED1-203ENST00000588259 LINC00862A6NCI5 91 aa10.45□□□□□ -0.74
TMED1-203ENST00000588259 TCAPO15273 167 aa10.45□□□□□ -0.74
TMED1-203ENST00000588259 TNFRSF6BO95407 300 aa10.45□□□□□ -0.74
TMED1-203ENST00000588259 MRPL54Q6P161 138 aaKnown RBP10.45□□□□□ -0.74
TMED1-203ENST00000588259 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
TMED1-203ENST00000588259 D6R8Y8 96 aa10.44□□□□□ -0.74
TMED1-203ENST00000588259 KRTAP10-8P60410 259 aa10.44□□□□□ -0.74
TMED1-203ENST00000588259 OR10D4PQ8NGN7 298 aa10.44□□□□□ -0.74
TMED1-203ENST00000588259 SMIM2Q9BVW6 85 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms