RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CEBPGP53567 150 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 KRTAP10-8P60410 259 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 SYCNQ0VAF6 134 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 REG3GQ6UW15 175 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 BORCS7Q96B45 105 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 MRAP2Q96G30 205 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
ERCC1-205ENST00000587888 GAGE2BQ13066 116 aa8.79□□□□□ -1
ERCC1-205ENST00000587888 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
ERCC1-205ENST00000587888 Q6ZRP5 223 aa8.79□□□□□ -1
ERCC1-205ENST00000587888 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
ERCC1-205ENST00000587888 ZNF664Q8N3J9 261 aa8.79□□□□□ -1
ERCC1-205ENST00000587888 SRSF9Q13242 221 aaKnown RBP eCLIP8.78□□□□□ -1
ERCC1-205ENST00000587888 IGLV4-69A0A075B6H9 119 aa8.77□□□□□ -1.01
ERCC1-205ENST00000587888 MALP21145 153 aa8.77□□□□□ -1.01
ERCC1-205ENST00000587888 CAMPP49913 170 aa8.77□□□□□ -1.01
ERCC1-205ENST00000587888 POLR2KP53803 58 aaKnown RBP8.77□□□□□ -1.01
ERCC1-205ENST00000587888 TCTE3Q8IZS6 198 aa8.77□□□□□ -1.01
ERCC1-205ENST00000587888 A0A1B0GUT8 65 aa8.76□□□□□ -1.01
ERCC1-205ENST00000587888 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
ERCC1-205ENST00000587888 RAB4AP20338 218 aa8.76□□□□□ -1.01
ERCC1-205ENST00000587888 PTTG1IPP53801 180 aa8.76□□□□□ -1.01
ERCC1-205ENST00000587888 MRPL52Q86TS9 123 aaKnown RBP8.76□□□□□ -1.01
ERCC1-205ENST00000587888 ISOC2Q96AB3 205 aa8.76□□□□□ -1.01
ERCC1-205ENST00000587888 TMEM191AQ9H0A3 160 aa8.76□□□□□ -1.01
ERCC1-205ENST00000587888 TRBV27A0A0K0K1C4 114 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 C7orf77A4D0Y5 90 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 SMKR1H3BMG3 65 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 BLOC1S1P78537 153 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 RNASE13Q5GAN3 156 aaKnown RBP8.75□□□□□ -1.01
ERCC1-205ENST00000587888 CT83Q5H943 113 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 AMN1Q8IY45 258 aa8.75□□□□□ -1.01
ERCC1-205ENST00000587888 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 C1orf196B1AJZ1 125 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 COX7A2LO14548 114 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 VCYO14598 125 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 FCER1GP30273 86 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 ALKAL2Q6UX46 152 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 TSKUQ8WUA8 353 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 FAM210AQ96ND0 272 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
ERCC1-205ENST00000587888 TRAV13-1A0A0B4J241 112 aa8.73□□□□□ -1.01
ERCC1-205ENST00000587888 C5orf38Q86SI9 138 aa8.73□□□□□ -1.01
ERCC1-205ENST00000587888 NUP35Q8NFH5 326 aa8.73□□□□□ -1.01
ERCC1-205ENST00000587888 LINC01551Q86U37 167 aa8.72□□□□□ -1.01
ERCC1-205ENST00000587888 SMIM7Q9BQ49 75 aa8.72□□□□□ -1.01
ERCC1-205ENST00000587888 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
ERCC1-205ENST00000587888 APOMO95445 188 aa8.71□□□□□ -1.02
ERCC1-205ENST00000587888 MT-ND6P03923 174 aa8.71□□□□□ -1.02
ERCC1-205ENST00000587888 RPL18AQ02543 176 aaKnown RBP8.71□□□□□ -1.02
ERCC1-205ENST00000587888 OPRPNQ99935 248 aaPredicted RBP8.71□□□□□ -1.02
ERCC1-205ENST00000587888 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.02
ERCC1-205ENST00000587888 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
ERCC1-205ENST00000587888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.7□□□□□ -1.02
ERCC1-205ENST00000587888 SUMO2P61956 95 aaKnown RBP8.7□□□□□ -1.02
ERCC1-205ENST00000587888 RIGQ13278 110 aa8.7□□□□□ -1.02
ERCC1-205ENST00000587888 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
ERCC1-205ENST00000587888 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
ERCC1-205ENST00000587888 OSTCQ9NRP0 149 aa8.7□□□□□ -1.02
ERCC1-205ENST00000587888 PSORS1C2Q9UIG4 136 aa8.7□□□□□ -1.02
ERCC1-205ENST00000587888 CSDC2Q9Y534 153 aaKnown RBP8.7□□□□□ -1.02
ERCC1-205ENST00000587888 PPP1R17O96001 155 aa8.69□□□□□ -1.02
ERCC1-205ENST00000587888 SMAGPQ0VAQ4 97 aa8.69□□□□□ -1.02
ERCC1-205ENST00000587888 C1orf137Q5JT78 98 aa8.69□□□□□ -1.02
ERCC1-205ENST00000587888 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
ERCC1-205ENST00000587888 NRACQ8N912 160 aa8.69□□□□□ -1.02
ERCC1-205ENST00000587888 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
ERCC1-205ENST00000587888 Q6ZUT4 128 aa8.68□□□□□ -1.02
ERCC1-205ENST00000587888 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
ERCC1-205ENST00000587888 V9GYV3 84 aa8.68□□□□□ -1.02
ERCC1-205ENST00000587888 SPAG11BQ08648 103 aa8.67□□□□□ -1.02
ERCC1-205ENST00000587888 TMEM18Q96B42 140 aa8.67□□□□□ -1.02
ERCC1-205ENST00000587888 TNXBP22105 4242 aa8.67□□□□□ -1.02
ERCC1-205ENST00000587888 SRP19P09132 144 aaKnown RBP8.66□□□□□ -1.02
ERCC1-205ENST00000587888 MRPL51Q4U2R6 128 aaKnown RBP8.66□□□□□ -1.02
ERCC1-205ENST00000587888 LRP2P98164 4655 aa8.66□□□□□ -1.02
ERCC1-205ENST00000587888 PPP1R2P9O14990 202 aa8.65□□□□□ -1.02
ERCC1-205ENST00000587888 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
ERCC1-205ENST00000587888 AKAP14Q86UN6 197 aa8.65□□□□□ -1.02
ERCC1-205ENST00000587888 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.02
ERCC1-205ENST00000587888 NAT8BQ9UHF3 227 aa8.65□□□□□ -1.02
ERCC1-205ENST00000587888 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
ERCC1-205ENST00000587888 TMEM241Q24JQ0 296 aa8.64□□□□□ -1.03
ERCC1-205ENST00000587888 RNF151Q2KHN1 245 aa8.64□□□□□ -1.03
ERCC1-205ENST00000587888 ORAOV1Q8WV07 137 aa8.64□□□□□ -1.03
ERCC1-205ENST00000587888 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
ERCC1-205ENST00000587888 A0A087WZ39 114 aa8.63□□□□□ -1.03
ERCC1-205ENST00000587888 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
ERCC1-205ENST00000587888 CKS2P33552 79 aa8.63□□□□□ -1.03
ERCC1-205ENST00000587888 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
ERCC1-205ENST00000587888 OR10D4PQ8NGN7 298 aa8.63□□□□□ -1.03
ERCC1-205ENST00000587888 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
ERCC1-205ENST00000587888 IGLV7-43P04211 117 aa8.62□□□□□ -1.03
ERCC1-205ENST00000587888 RPL23P62829 140 aaKnown RBP8.62□□□□□ -1.03
ERCC1-205ENST00000587888 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
ERCC1-205ENST00000587888 UNQ6190/PRO20217Q6UXQ8 127 aa8.62□□□□□ -1.03
ERCC1-205ENST00000587888 IMMP2LQ96T52 175 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms