RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 CCL25O15444 150 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 TNFRSF6BO95407 300 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 CNBPP62633 177 aaKnown RBP6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 IFITM2Q01629 132 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 ORMDL3Q8N138 153 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 CHCHD10Q8WYQ3 142 aaPredicted RBP6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 IMMP2LQ96T52 175 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 TIMM21Q9BVV7 248 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 SMIM2Q9BVW6 85 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 IGKV3OR2-268A0A0C4DH90 116 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 hDV102S1A0JD36 115 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 SS18Q15532 418 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 Q5VSD8 79 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 ZNF664Q8N3J9 261 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 CTDSP1Q9GZU7 261 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
SMARCA4-209ENST00000586122 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
SMARCA4-209ENST00000586122 TRAV9-1A0A075B6T8 112 aa6.75□□□□□ -1.33
SMARCA4-209ENST00000586122 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
SMARCA4-209ENST00000586122 CHAC1Q9BUX1 264 aa6.75□□□□□ -1.33
SMARCA4-209ENST00000586122 SEC11CQ9BY50 192 aa6.75□□□□□ -1.33
SMARCA4-209ENST00000586122 UBE2D4Q9Y2X8 147 aa6.75□□□□□ -1.33
SMARCA4-209ENST00000586122 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
SMARCA4-209ENST00000586122 NPYP01303 97 aa6.74□□□□□ -1.33
SMARCA4-209ENST00000586122 LINC01620Q4KN68 170 aa6.74□□□□□ -1.33
SMARCA4-209ENST00000586122 CD164L2Q6UWJ8 174 aa6.74□□□□□ -1.33
SMARCA4-209ENST00000586122 TMEM136Q6ZRR5 245 aa6.74□□□□□ -1.33
SMARCA4-209ENST00000586122 PRELID3AQ96N28 172 aa6.74□□□□□ -1.33
SMARCA4-209ENST00000586122 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 PRSS47A8MTI9 375 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 PLA2G1BP04054 148 aaKnown RBP6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 ADCYAP1P18509 176 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 RAB5AP20339 215 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 FOXI1Q12951 378 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 SCXQ7RTU7 201 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 C15orf56Q8N910 161 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 SPANXA1Q9NS26 97 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 PKIGQ9Y2B9 76 aa6.73□□□□□ -1.33
SMARCA4-209ENST00000586122 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
SMARCA4-209ENST00000586122 K7EMI3 77 aa6.72□□□□□ -1.33
SMARCA4-209ENST00000586122 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
SMARCA4-209ENST00000586122 XCL1P47992 114 aa6.72□□□□□ -1.33
SMARCA4-209ENST00000586122 HAMPP81172 84 aa6.72□□□□□ -1.33
SMARCA4-209ENST00000586122 COMMD7Q86VX2 200 aa6.72□□□□□ -1.33
SMARCA4-209ENST00000586122 MAP1LC3AQ9H492 121 aa6.72□□□□□ -1.33
SMARCA4-209ENST00000586122 S100PP25815 95 aa6.71□□□□□ -1.34
SMARCA4-209ENST00000586122 MRPS36P82909 103 aaKnown RBP6.71□□□□□ -1.34
SMARCA4-209ENST00000586122 COX19Q49B96 90 aa6.71□□□□□ -1.34
SMARCA4-209ENST00000586122 SDIM1Q6ZPB5 146 aa6.71□□□□□ -1.34
SMARCA4-209ENST00000586122 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
SMARCA4-209ENST00000586122 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
SMARCA4-209ENST00000586122 INAFM2P0DMQ5 153 aa6.7□□□□□ -1.34
SMARCA4-209ENST00000586122 IFI27P40305 119 aaPredicted RBP6.7□□□□□ -1.34
SMARCA4-209ENST00000586122 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
SMARCA4-209ENST00000586122 PYGO1Q9Y3Y4 419 aa6.7□□□□□ -1.34
SMARCA4-209ENST00000586122 COX7A2LO14548 114 aa6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 G0S2P27469 103 aa6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 RPL39P62891 51 aaKnown RBP6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 RHEBQ15382 184 aa6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 C10orf91Q5T1B1 145 aa6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 Q6ZUT4 128 aa6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 Q8N8P6 123 aa6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 NXT2Q9NPJ8 142 aaKnown RBP6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 CARHSP1Q9Y2V2 147 aaKnown RBP6.69□□□□□ -1.34
SMARCA4-209ENST00000586122 FAT1Q14517 4588 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 TRAV13-1A0A0B4J241 112 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 APOMO95445 188 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 SLPIP03973 132 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 NPSP0C0P6 89 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 MALP21145 153 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 HIGD2BQ4VC39 106 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 ORMDL2Q53FV1 153 aa6.68□□□□□ -1.34
SMARCA4-209ENST00000586122 FLG2Q5D862 2391 aaPredicted RBP6.67□□□□□ -1.34
SMARCA4-209ENST00000586122 MT-ND6P03923 174 aa6.67□□□□□ -1.34
SMARCA4-209ENST00000586122 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
SMARCA4-209ENST00000586122 CYSLTR1Q9Y271 337 aa6.67□□□□□ -1.34
SMARCA4-209ENST00000586122 LOC389332A0A1B0GUA5 103 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 IFITM10A6NMD0 228 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 F8WDY8 70 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 NDUFA5Q16718 116 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 RNASE13Q5GAN3 156 aaKnown RBP6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 TMEM141Q96I45 108 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 LINC00474Q9P2X8 69 aa6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
SMARCA4-209ENST00000586122 SYCNQ0VAF6 134 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 PAPPA-AS1Q5QFB9 102 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 C2orf66Q6UXQ4 117 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 Q6ZN92 141 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms