RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	TMEM136	Q6ZRR5	245 aa		10.7	□□□□□ -0.7
CIRBP-204	ENST00000585630	LINC00528	Q8N1L1	170 aa		10.7	□□□□□ -0.7
CIRBP-204	ENST00000585630	MYCBP2	O75592	4640 aa		10.7	□□□□□ -0.7
CIRBP-204	ENST00000585630		H7C423	109 aa		10.69	□□□□□ -0.7
CIRBP-204	ENST00000585630	PLA2G1B	P04054	148 aa	Known RBP	10.69	□□□□□ -0.7
CIRBP-204	ENST00000585630	RPS10	P46783	165 aa	Known RBP	10.69	□□□□□ -0.7
CIRBP-204	ENST00000585630	COX19	Q49B96	90 aa		10.69	□□□□□ -0.7
CIRBP-204	ENST00000585630	DGAT2L7P	Q6IED9	249 aa		10.69	□□□□□ -0.7
CIRBP-204	ENST00000585630	SMKR1	H3BMG3	65 aa		10.68	□□□□□ -0.7
CIRBP-204	ENST00000585630	MRAP2	Q96G30	205 aa		10.68	□□□□□ -0.7
CIRBP-204	ENST00000585630	GNB1L	Q9BYB4	327 aa		10.68	□□□□□ -0.7
CIRBP-204	ENST00000585630	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.67	□□□□□ -0.7
CIRBP-204	ENST00000585630	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.67	□□□□□ -0.7
CIRBP-204	ENST00000585630		I3L3M4	83 aa		10.67	□□□□□ -0.7
CIRBP-204	ENST00000585630	PMCH	P20382	165 aa		10.67	□□□□□ -0.7
CIRBP-204	ENST00000585630	FAM104B	Q5XKR9	115 aa		10.67	□□□□□ -0.7
CIRBP-204	ENST00000585630	AMMECR1L	Q6DCA0	310 aa		10.67	□□□□□ -0.7
CIRBP-204	ENST00000585630	ST20	Q9HBF5	79 aa		10.67	□□□□□ -0.7
CIRBP-204	ENST00000585630	TSHB	P01222	138 aa		10.66	□□□□□ -0.7
CIRBP-204	ENST00000585630	FGF6	P10767	208 aa		10.66	□□□□□ -0.7
CIRBP-204	ENST00000585630	ZNF25	P17030	456 aa	Predicted RBP	10.66	□□□□□ -0.7
CIRBP-204	ENST00000585630	CNBP	P62633	177 aa	Known RBP	10.66	□□□□□ -0.7
CIRBP-204	ENST00000585630	C9orf163	Q8N9P6	203 aa		10.66	□□□□□ -0.7
CIRBP-204	ENST00000585630	CIRBP-AS1	Q8TBR5	109 aa		10.66	□□□□□ -0.7
CIRBP-204	ENST00000585630	MT-ND6	P03923	174 aa		10.65	□□□□□ -0.7
CIRBP-204	ENST00000585630	RAB5A	P20339	215 aa		10.65	□□□□□ -0.7
CIRBP-204	ENST00000585630	MRPL51	Q4U2R6	128 aa	Known RBP	10.65	□□□□□ -0.7
CIRBP-204	ENST00000585630	RNASEK	Q6P5S7	137 aa	Known RBP	10.65	□□□□□ -0.7
CIRBP-204	ENST00000585630	TRBV27	A0A0K0K1C4	114 aa		10.64	□□□□□ -0.71
CIRBP-204	ENST00000585630	hDV102S1	A0JD36	115 aa		10.64	□□□□□ -0.71
CIRBP-204	ENST00000585630	ESD	P10768	282 aa		10.64	□□□□□ -0.71
CIRBP-204	ENST00000585630	POLR2K	P53803	58 aa	Known RBP	10.64	□□□□□ -0.71
CIRBP-204	ENST00000585630	MRPL18	Q9H0U6	180 aa	Known RBP	10.64	□□□□□ -0.71
CIRBP-204	ENST00000585630	TRAPPC1	Q9Y5R8	145 aa		10.64	□□□□□ -0.71
CIRBP-204	ENST00000585630	IGKV3OR2-268	A0A0C4DH90	116 aa		10.63	□□□□□ -0.71
CIRBP-204	ENST00000585630	C15orf56	Q8N910	161 aa		10.63	□□□□□ -0.71
CIRBP-204	ENST00000585630	GAGE12H	A6NDE8	117 aa		10.62	□□□□□ -0.71
CIRBP-204	ENST00000585630	FABP9	Q0Z7S8	132 aa		10.62	□□□□□ -0.71
CIRBP-204	ENST00000585630	NRAC	Q8N912	160 aa		10.62	□□□□□ -0.71
CIRBP-204	ENST00000585630	PPP1R17	O96001	155 aa		10.61	□□□□□ -0.71
CIRBP-204	ENST00000585630	CKS2	P33552	79 aa		10.61	□□□□□ -0.71
CIRBP-204	ENST00000585630	KIAA1644	Q3SXP7	199 aa		10.61	□□□□□ -0.71
CIRBP-204	ENST00000585630	MRPL52	Q86TS9	123 aa	Known RBP	10.61	□□□□□ -0.71
CIRBP-204	ENST00000585630	OR5A1	Q8NGJ0	315 aa		10.61	□□□□□ -0.71
CIRBP-204	ENST00000585630	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.61	□□□□□ -0.71
CIRBP-204	ENST00000585630	AP5S1	Q9NUS5	200 aa		10.61	□□□□□ -0.71
CIRBP-204	ENST00000585630	KRTAP10-4	P60372	401 aa	Predicted RBP	10.6	□□□□□ -0.71
CIRBP-204	ENST00000585630	SUMO2	P61956	95 aa	Known RBP	10.6	□□□□□ -0.71
CIRBP-204	ENST00000585630	SDIM1	Q6ZPB5	146 aa		10.6	□□□□□ -0.71
CIRBP-204	ENST00000585630	TMEM101	Q96IK0	257 aa		10.6	□□□□□ -0.71
CIRBP-204	ENST00000585630	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.6	□□□□□ -0.71
CIRBP-204	ENST00000585630	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.59	□□□□□ -0.71
CIRBP-204	ENST00000585630		D6R8Y8	96 aa		10.59	□□□□□ -0.71
CIRBP-204	ENST00000585630	VCY	O14598	125 aa		10.59	□□□□□ -0.71
CIRBP-204	ENST00000585630	SLPI	P03973	132 aa		10.59	□□□□□ -0.71
CIRBP-204	ENST00000585630	TRGC2	P03986	189 aa		10.59	□□□□□ -0.71
CIRBP-204	ENST00000585630	HERC1	Q15751	4861 aa		10.58	□□□□□ -0.72
CIRBP-204	ENST00000585630	PANO1	I0J062	215 aa		10.58	□□□□□ -0.72
CIRBP-204	ENST00000585630	PPBP	P02775	128 aa		10.58	□□□□□ -0.72
CIRBP-204	ENST00000585630	FOXI1	Q12951	378 aa		10.58	□□□□□ -0.72
CIRBP-204	ENST00000585630	CIRBP	Q14011	172 aa	Known RBP	10.58	□□□□□ -0.72
CIRBP-204	ENST00000585630	CFAP161	Q6P656	301 aa		10.58	□□□□□ -0.72
CIRBP-204	ENST00000585630	ORMDL3	Q8N138	153 aa		10.58	□□□□□ -0.72
CIRBP-204	ENST00000585630	IGHV3-64	A0A075B6Q5	118 aa		10.57	□□□□□ -0.72
CIRBP-204	ENST00000585630	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.57	□□□□□ -0.72
CIRBP-204	ENST00000585630	PHOX2A	O14813	284 aa		10.57	□□□□□ -0.72
CIRBP-204	ENST00000585630	TNFRSF6B	O95407	300 aa		10.57	□□□□□ -0.72
CIRBP-204	ENST00000585630	FCER1G	P30273	86 aa		10.57	□□□□□ -0.72
CIRBP-204	ENST00000585630	PRELID3A	Q96N28	172 aa		10.57	□□□□□ -0.72
CIRBP-204	ENST00000585630	LINC00959	A0A1B0GUT2	108 aa		10.56	□□□□□ -0.72
CIRBP-204	ENST00000585630		J3QL48	77 aa		10.56	□□□□□ -0.72
CIRBP-204	ENST00000585630	NPY	P01303	97 aa		10.56	□□□□□ -0.72
CIRBP-204	ENST00000585630	KIR2DL4	Q99706	377 aa		10.56	□□□□□ -0.72
CIRBP-204	ENST00000585630	C20orf78	Q9BR46	151 aa		10.56	□□□□□ -0.72
CIRBP-204	ENST00000585630	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.56	□□□□□ -0.72
CIRBP-204	ENST00000585630	CDC42SE2	Q9NRR3	84 aa		10.56	□□□□□ -0.72
CIRBP-204	ENST00000585630	CCL25	O15444	150 aa		10.55	□□□□□ -0.72
CIRBP-204	ENST00000585630	XCL1	P47992	114 aa		10.55	□□□□□ -0.72
CIRBP-204	ENST00000585630	RPL32	P62910	135 aa	Known RBP	10.55	□□□□□ -0.72
CIRBP-204	ENST00000585630	HIGD2B	Q4VC39	106 aa		10.55	□□□□□ -0.72
CIRBP-204	ENST00000585630	CSDC2	Q9Y534	153 aa	Known RBP	10.55	□□□□□ -0.72
CIRBP-204	ENST00000585630	ZNF664	Q8N3J9	261 aa		10.54	□□□□□ -0.72
CIRBP-204	ENST00000585630	LAMTOR2	Q9Y2Q5	125 aa		10.54	□□□□□ -0.72
CIRBP-204	ENST00000585630	SMAGP	Q0VAQ4	97 aa		10.53	□□□□□ -0.72
CIRBP-204	ENST00000585630	SPACA4	Q8TDM5	124 aa		10.53	□□□□□ -0.72
CIRBP-204	ENST00000585630	SMIM2	Q9BVW6	85 aa		10.53	□□□□□ -0.72
CIRBP-204	ENST00000585630	UBE2D4	Q9Y2X8	147 aa		10.53	□□□□□ -0.72
CIRBP-204	ENST00000585630	CHTF8	P0CG12	524 aa		10.52	□□□□□ -0.73
CIRBP-204	ENST00000585630	RPL37A	P61513	92 aa	Known RBP	10.52	□□□□□ -0.73
CIRBP-204	ENST00000585630	SS18	Q15532	418 aa		10.52	□□□□□ -0.73
CIRBP-204	ENST00000585630	IGHV1-58	A0A0C4DH39	117 aa		10.51	□□□□□ -0.73
CIRBP-204	ENST00000585630	C1orf196	B1AJZ1	125 aa		10.51	□□□□□ -0.73
CIRBP-204	ENST00000585630	TCAP	O15273	167 aa		10.51	□□□□□ -0.73
CIRBP-204	ENST00000585630	CD164L2	Q6UWJ8	174 aa		10.51	□□□□□ -0.73
CIRBP-204	ENST00000585630	TIMM21	Q9BVV7	248 aa		10.51	□□□□□ -0.73
CIRBP-204	ENST00000585630	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.5	□□□□□ -0.73
CIRBP-204	ENST00000585630		Q6ZUT4	128 aa		10.5	□□□□□ -0.73
CIRBP-204	ENST00000585630	C18orf32	Q8TCD1	76 aa		10.5	□□□□□ -0.73
CIRBP-204	ENST00000585630	MAP1LC3A	Q9H492	121 aa		10.5	□□□□□ -0.73
CIRBP-204	ENST00000585630	LOC389332	A0A1B0GUA5	103 aa		10.49	□□□□□ -0.73

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