RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	SMKR1	H3BMG3	65 aa		7.26	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	ESD	P10768	282 aa		7.26	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	SS18	Q15532	418 aa		7.26	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	FAM231D	Q6ZW35	169 aa		7.26	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	HIGD1C	A8MV81	97 aa		7.25	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	RNASE13	Q5GAN3	156 aa	Known RBP	7.25	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	AMN1	Q8IY45	258 aa		7.25	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	LINC01600	Q96MT4	127 aa		7.25	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	CDC42SE2	Q9NRR3	84 aa		7.25	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114		A0A1B0GUT8	65 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	C7orf77	A4D0Y5	90 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	ZNF561-AS1	K7EIQ3	104 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	RAB4A	P20338	218 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	BLOC1S1	P78537	153 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	SYCN	Q0VAF6	134 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	GAGE2B	Q13066	116 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	CT83	Q5H943	113 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	ZNF664	Q8N3J9	261 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	SMIM7	Q9BQ49	75 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	LINC00474	Q9P2X8	69 aa		7.24	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	hCG_2014768	A0A024R1R8	64 aa		7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	CAMP	P49913	170 aa		7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	POLR2K	P53803	58 aa	Known RBP	7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	CD164L2	Q6UWJ8	174 aa		7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	MRPL52	Q86TS9	123 aa	Known RBP	7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	LINC01551	Q86U37	167 aa		7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	TSKU	Q8WUA8	353 aa		7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	EIF5A2	Q9GZV4	153 aa	Known RBP	7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	TMEM191A	Q9H0A3	160 aa		7.23	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	IGLV4-69	A0A075B6H9	119 aa		7.22	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	TRBV27	A0A0K0K1C4	114 aa		7.22	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	MAL	P21145	153 aa		7.22	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	FCER1G	P30273	86 aa		7.22	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	LRP2	P98164	4655 aa		7.21	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	TRAV13-1	A0A0B4J241	112 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114		A0A0J9YXV3	536 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	ZNF727	A8MUV8	499 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	PTTG1IP	P53801	180 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	SPINK6	Q6UWN8	80 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114		Q6ZRP5	223 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	AKAP14	Q86UN6	197 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	PKIG	Q9Y2B9	76 aa		7.21	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	LOC107984640	A0A0U1RRK4	108 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114		A0A1W2PNN7	141 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	COX7A2L	O14548	114 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	VCY	O14598	125 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	REG3G	Q6UW15	175 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114		Q6ZUT4	128 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	C5orf38	Q86SI9	138 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	ISOC2	Q96AB3	205 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	CAMK2N2	Q96S95	79 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	OSTC	Q9NRP0	149 aa		7.2	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	C1orf196	B1AJZ1	125 aa		7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	SRP19	P09132	144 aa	Known RBP	7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	KRTAP10-8	P60410	259 aa		7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	SUMO2	P61956	95 aa	Known RBP	7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	RPL18A	Q02543	176 aa	Known RBP	7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.19	□□□□□ -1.26	4e-12	■□□□□ 8.5
CDK5RAP3-223	ENST00000582114	RIG	Q13278	110 aa		7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	NRAC	Q8N912	160 aa		7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	NUP35	Q8NFH5	326 aa		7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	UBE2D4	Q9Y2X8	147 aa		7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114		V9GYV3	84 aa		7.19	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	FAM210A	Q96ND0	272 aa		7.18	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	KIR2DL4	Q99706	377 aa		7.18	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	OPRPN	Q99935	248 aa	Predicted RBP	7.18	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	7.17	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	APOM	O95445	188 aa		7.17	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	SPAG11B	Q08648	103 aa		7.17	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	MRPL51	Q4U2R6	128 aa	Known RBP	7.17	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	C9orf116	Q5BN46	136 aa	Predicted RBP	7.17	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	RNF213	Q63HN8	5207 aa		7.17	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	MT-ND6	P03923	174 aa		7.16	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	RPL39	P62891	51 aa	Known RBP	7.16	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	ADIRF	Q15847	76 aa		7.16	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	PHF5A	Q7RTV0	110 aa	Known RBP	7.16	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	CSDC2	Q9Y534	153 aa	Known RBP	7.16	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	PPP1R17	O96001	155 aa		7.15	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	RPL23	P62829	140 aa	Known RBP	7.15	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	SMAGP	Q0VAQ4	97 aa		7.15	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	TMEM241	Q24JQ0	296 aa		7.15	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	FAM104B	Q5XKR9	115 aa		7.15	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	NAT8B	Q9UHF3	227 aa		7.15	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	PSORS1C2	Q9UIG4	136 aa		7.15	□□□□□ -1.26
CDK5RAP3-223	ENST00000582114	PPP1R2P9	O14990	202 aa		7.14	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	C1orf137	Q5JT78	98 aa		7.14	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	TMEM18	Q96B42	140 aa		7.14	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	C2orf48	Q96LS8	159 aa		7.14	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114		C9JQL5	133 aa		7.13	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	CKS2	P33552	79 aa		7.13	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	FAM74A3	Q4VXF1	159 aa		7.13	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	ORAOV1	Q8WV07	137 aa		7.13	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	FAM168B	A1KXE4	195 aa		7.12	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	TCAP	O15273	167 aa		7.12	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	TNFRSF6B	O95407	300 aa		7.12	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	MRPL54	Q6P161	138 aa	Known RBP	7.12	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	FAM104A	Q969W3	186 aa		7.12	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	TIMM21	Q9BVV7	248 aa		7.12	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	SMIM27	A0A1W2PRY6	76 aa		7.11	□□□□□ -1.27
CDK5RAP3-223	ENST00000582114	IFITM10	A6NMD0	228 aa		7.11	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms