RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 FOXI1Q12951 378 aa7.99□□□□□ -1.13
CDK5RAP3-213ENST00000579605 SLC51BQ86UW2 128 aa7.99□□□□□ -1.13
CDK5RAP3-213ENST00000579605 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
CDK5RAP3-213ENST00000579605 TMEM101Q96IK0 257 aa7.99□□□□□ -1.13
CDK5RAP3-213ENST00000579605 BTF3L4Q96K17 158 aa7.99□□□□□ -1.13
CDK5RAP3-213ENST00000579605 I3L3M4 83 aa7.98□□□□□ -1.13
CDK5RAP3-213ENST00000579605 GATCO43716 136 aaKnown RBP7.98□□□□□ -1.13
CDK5RAP3-213ENST00000579605 ZNF25P17030 456 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-213ENST00000579605 XCL1P47992 114 aa7.98□□□□□ -1.13
CDK5RAP3-213ENST00000579605 C1orf137Q5JT78 98 aa7.98□□□□□ -1.13
CDK5RAP3-213ENST00000579605 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
CDK5RAP3-213ENST00000579605 IGHV1-58A0A0C4DH39 117 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 A8MWL6 223 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 CCL25O15444 150 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TSPAN13O95857 204 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 DIRC1Q969H9 104 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 BORCS7Q96B45 105 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 LINC00526Q96FQ7 95 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 ST20Q9HBF5 79 aa7.96□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TRBV6-5A0A0K0K1A5 114 aa7.95□□□□□ -1.14
CDK5RAP3-213ENST00000579605 SS18Q15532 418 aa7.95□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TCTE3Q8IZS6 198 aa7.95□□□□□ -1.14
CDK5RAP3-213ENST00000579605 MRAP2Q96G30 205 aa7.95□□□□□ -1.14
CDK5RAP3-213ENST00000579605 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
CDK5RAP3-213ENST00000579605 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 ZNF561-AS1K7EIQ3 104 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 ESDP10768 282 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 GAGE2BQ13066 116 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 FAM231DQ6ZW35 169 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 FAM210AQ96ND0 272 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TMEM242Q9NWH2 141 aa7.94□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TMEM250H0YL14 139 aa7.93□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TSHBP01222 138 aa7.93□□□□□ -1.14
CDK5RAP3-213ENST00000579605 UBE2D1P51668 147 aa7.93□□□□□ -1.14
CDK5RAP3-213ENST00000579605 CEBPGP53567 150 aa7.93□□□□□ -1.14
CDK5RAP3-213ENST00000579605 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
CDK5RAP3-213ENST00000579605 BLOC1S1P78537 153 aa7.92□□□□□ -1.14
CDK5RAP3-213ENST00000579605 SYCNQ0VAF6 134 aa7.92□□□□□ -1.14
CDK5RAP3-213ENST00000579605 CT83Q5H943 113 aa7.92□□□□□ -1.14
CDK5RAP3-213ENST00000579605 CD164L2Q6UWJ8 174 aa7.92□□□□□ -1.14
CDK5RAP3-213ENST00000579605 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
CDK5RAP3-213ENST00000579605 A0A1B0GUT8 65 aa7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 C7orf77A4D0Y5 90 aa7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 H0Y9J4 135 aa7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 PHF5AQ7RTV0 110 aaKnown RBP7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 ISOC2Q96AB3 205 aa7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TMEM191AQ9H0A3 160 aa7.91□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
CDK5RAP3-213ENST00000579605 HIGD1CA8MV81 97 aa7.9□□□□□ -1.14
CDK5RAP3-213ENST00000579605 MALP21145 153 aa7.9□□□□□ -1.14
CDK5RAP3-213ENST00000579605 CAMPP49913 170 aa7.9□□□□□ -1.14
CDK5RAP3-213ENST00000579605 PTTG1IPP53801 180 aa7.9□□□□□ -1.14
CDK5RAP3-213ENST00000579605 POLR2KP53803 58 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-213ENST00000579605 TSKUQ8WUA8 353 aa7.9□□□□□ -1.14
CDK5RAP3-213ENST00000579605 LOC107984640A0A0U1RRK4 108 aa7.89□□□□□ -1.15
CDK5RAP3-213ENST00000579605 RAB4AP20338 218 aa7.89□□□□□ -1.15
CDK5RAP3-213ENST00000579605 FCER1GP30273 86 aa7.89□□□□□ -1.15
CDK5RAP3-213ENST00000579605 ALKAL2Q6UX46 152 aa7.89□□□□□ -1.15
CDK5RAP3-213ENST00000579605 AMN1Q8IY45 258 aa7.89□□□□□ -1.15
CDK5RAP3-213ENST00000579605 IGLV4-69A0A075B6H9 119 aa7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 C1orf196B1AJZ1 125 aa7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 COX7A2LO14548 114 aa7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 VCYO14598 125 aa7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 SMAGPQ0VAQ4 97 aa7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 C9orf116Q5BN46 136 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 EIF5A2Q9GZV4 153 aaKnown RBP7.88□□□□□ -1.15
CDK5RAP3-213ENST00000579605 PPP1R17O96001 155 aa7.87□□□□□ -1.15
CDK5RAP3-213ENST00000579605 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
CDK5RAP3-213ENST00000579605 RIGQ13278 110 aa7.87□□□□□ -1.15
CDK5RAP3-213ENST00000579605 LINC01551Q86U37 167 aa7.87□□□□□ -1.15
CDK5RAP3-213ENST00000579605 CAMK2N2Q96S95 79 aa7.87□□□□□ -1.15
CDK5RAP3-213ENST00000579605 OSTCQ9NRP0 149 aa7.87□□□□□ -1.15
CDK5RAP3-213ENST00000579605 A0A087WZ39 114 aa7.86□□□□□ -1.15
CDK5RAP3-213ENST00000579605 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
CDK5RAP3-213ENST00000579605 ZNF727A8MUV8 499 aa7.86□□□□□ -1.15
CDK5RAP3-213ENST00000579605 SMKR1H3BMG3 65 aa7.86□□□□□ -1.15
CDK5RAP3-213ENST00000579605 RPL13AP40429 203 aaKnown RBP7.86□□□□□ -1.15
CDK5RAP3-213ENST00000579605 CSDC2Q9Y534 153 aaKnown RBP7.86□□□□□ -1.15
CDK5RAP3-213ENST00000579605 APOMO95445 188 aa7.85□□□□□ -1.15
CDK5RAP3-213ENST00000579605 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
CDK5RAP3-213ENST00000579605 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
CDK5RAP3-213ENST00000579605 NUP35Q8NFH5 326 aa7.85□□□□□ -1.15
CDK5RAP3-213ENST00000579605 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
CDK5RAP3-213ENST00000579605 UBE2D4Q9Y2X8 147 aa7.85□□□□□ -1.15
CDK5RAP3-213ENST00000579605 PPP1R2P9O14990 202 aa7.84□□□□□ -1.15
CDK5RAP3-213ENST00000579605 LINC01547P58512 204 aaPredicted RBP7.84□□□□□ -1.15
CDK5RAP3-213ENST00000579605 C5orf38Q86SI9 138 aa7.84□□□□□ -1.15
CDK5RAP3-213ENST00000579605 NRACQ8N912 160 aa7.84□□□□□ -1.15
CDK5RAP3-213ENST00000579605 TMEM18Q96B42 140 aa7.84□□□□□ -1.15
CDK5RAP3-213ENST00000579605 C2orf48Q96LS8 159 aa7.84□□□□□ -1.15
CDK5RAP3-213ENST00000579605 CDIP1Q9H305 208 aa7.84□□□□□ -1.15
CDK5RAP3-213ENST00000579605 RPL18AQ02543 176 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-213ENST00000579605 AKAP14Q86UN6 197 aa7.83□□□□□ -1.16
CDK5RAP3-213ENST00000579605 KRTAP11-1Q8IUC1 163 aa7.83□□□□□ -1.16
CDK5RAP3-213ENST00000579605 V9GYV3 84 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 205 ms