RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 GAS8-AS1O95177 125 aa11.15□□□□□ -0.62
SLC9A3R1-203ENST00000578958 PPP1R17O96001 155 aa11.15□□□□□ -0.62
SLC9A3R1-203ENST00000578958 RAB4AP20338 218 aa11.15□□□□□ -0.62
SLC9A3R1-203ENST00000578958 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
SLC9A3R1-203ENST00000578958 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 LINC00959A0A1B0GUT2 108 aa11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 VCYO14598 125 aa11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 ESDP10768 282 aa11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 HNRNPA3P51991 378 aaKnown RBP11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 FOXI1Q12951 378 aa11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 TMEM241Q24JQ0 296 aa11.14□□□□□ -0.63
SLC9A3R1-203ENST00000578958 IGHV1-58A0A0C4DH39 117 aa11.13□□□□□ -0.63
SLC9A3R1-203ENST00000578958 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
SLC9A3R1-203ENST00000578958 FAM74A3Q4VXF1 159 aa11.13□□□□□ -0.63
SLC9A3R1-203ENST00000578958 ZNF664Q8N3J9 261 aa11.13□□□□□ -0.63
SLC9A3R1-203ENST00000578958 NUP35Q8NFH5 326 aa11.13□□□□□ -0.63
SLC9A3R1-203ENST00000578958 PRSS3P2Q8NHM4 247 aa11.13□□□□□ -0.63
SLC9A3R1-203ENST00000578958 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 ZNF561-AS1K7EIQ3 104 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 ADIRFQ15847 76 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 Q6ZRU5 148 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 KIR2DL4Q99706 377 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 PLAC8Q9NZF1 115 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 V9GYV3 84 aa11.12□□□□□ -0.63
SLC9A3R1-203ENST00000578958 MRPL52Q86TS9 123 aaKnown RBP11.11□□□□□ -0.63
SLC9A3R1-203ENST00000578958 STPG4Q8N801 248 aa11.11□□□□□ -0.63
SLC9A3R1-203ENST00000578958 ISOC2Q96AB3 205 aa11.11□□□□□ -0.63
SLC9A3R1-203ENST00000578958 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
SLC9A3R1-203ENST00000578958 LINC00474Q9P2X8 69 aa11.11□□□□□ -0.63
SLC9A3R1-203ENST00000578958 PHOX2AO14813 284 aa11.1□□□□□ -0.63
SLC9A3R1-203ENST00000578958 MALP21145 153 aa11.1□□□□□ -0.63
SLC9A3R1-203ENST00000578958 CD164L2Q6UWJ8 174 aa11.1□□□□□ -0.63
SLC9A3R1-203ENST00000578958 PPP1R2P9O14990 202 aa11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 RPL23P62829 140 aaKnown RBP11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 TMEM18Q96B42 140 aa11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 CARD19Q96LW7 228 aa11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 NAT8Q9UHE5 227 aa11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 PLA2G2DQ9UNK4 145 aa11.09□□□□□ -0.63
SLC9A3R1-203ENST00000578958 C1orf196B1AJZ1 125 aa11.08□□□□□ -0.64
SLC9A3R1-203ENST00000578958 CAMPP49913 170 aa11.08□□□□□ -0.64
SLC9A3R1-203ENST00000578958 PEA15Q15121 130 aa11.08□□□□□ -0.64
SLC9A3R1-203ENST00000578958 A0A096LNI7 61 aa11.07□□□□□ -0.64
SLC9A3R1-203ENST00000578958 SYCNQ0VAF6 134 aa11.06□□□□□ -0.64
SLC9A3R1-203ENST00000578958 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
SLC9A3R1-203ENST00000578958 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
SLC9A3R1-203ENST00000578958 NRACQ8N912 160 aa11.06□□□□□ -0.64
SLC9A3R1-203ENST00000578958 A0A1B0GW15 77 aa11.05□□□□□ -0.64
SLC9A3R1-203ENST00000578958 LINC00862A6NCI5 91 aa11.05□□□□□ -0.64
SLC9A3R1-203ENST00000578958 COX7A2LO14548 114 aa11.05□□□□□ -0.64
SLC9A3R1-203ENST00000578958 CKS2P33552 79 aa11.05□□□□□ -0.64
SLC9A3R1-203ENST00000578958 CSDC2Q9Y534 153 aaKnown RBP11.05□□□□□ -0.64
SLC9A3R1-203ENST00000578958 TRAV13-1A0A0B4J241 112 aa11.04□□□□□ -0.64
SLC9A3R1-203ENST00000578958 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
SLC9A3R1-203ENST00000578958 RNASE13Q5GAN3 156 aaKnown RBP11.04□□□□□ -0.64
SLC9A3R1-203ENST00000578958 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
SLC9A3R1-203ENST00000578958 F8W036 122 aa11.03□□□□□ -0.64
SLC9A3R1-203ENST00000578958 TCAPO15273 167 aa11.03□□□□□ -0.64
SLC9A3R1-203ENST00000578958 S100A8P05109 93 aa11.03□□□□□ -0.64
SLC9A3R1-203ENST00000578958 C20orf78Q9BR46 151 aa11.03□□□□□ -0.64
SLC9A3R1-203ENST00000578958 A0A1B0GVG6 124 aa11.02□□□□□ -0.65
SLC9A3R1-203ENST00000578958 C9JQL5 133 aa11.02□□□□□ -0.65
SLC9A3R1-203ENST00000578958 APOMO95445 188 aa11.02□□□□□ -0.65
SLC9A3R1-203ENST00000578958 SMDT1Q9H4I9 107 aa11.02□□□□□ -0.65
SLC9A3R1-203ENST00000578958 IGLV4-69A0A075B6H9 119 aa11.01□□□□□ -0.65
SLC9A3R1-203ENST00000578958 PRR3P79522 188 aaKnown RBP11.01□□□□□ -0.65
SLC9A3R1-203ENST00000578958 GAGE2BQ13066 116 aa11.01□□□□□ -0.65
SLC9A3R1-203ENST00000578958 MRPL54Q6P161 138 aaKnown RBP11.01□□□□□ -0.65
SLC9A3R1-203ENST00000578958 CAMK2N2Q96S95 79 aa11.01□□□□□ -0.65
SLC9A3R1-203ENST00000578958 HMCN2Q8NDA2 5059 aa11□□□□□ -0.65
SLC9A3R1-203ENST00000578958 LOC107984640A0A0U1RRK4 108 aa11□□□□□ -0.65
SLC9A3R1-203ENST00000578958 HBBP68871 147 aa11□□□□□ -0.65
SLC9A3R1-203ENST00000578958 SRSF3P84103 164 aaKnown RBP11□□□□□ -0.65
SLC9A3R1-203ENST00000578958 Q6ZUT4 128 aa11□□□□□ -0.65
SLC9A3R1-203ENST00000578958 C5orf38Q86SI9 138 aa11□□□□□ -0.65
SLC9A3R1-203ENST00000578958 TIMM21Q9BVV7 248 aa11□□□□□ -0.65
SLC9A3R1-203ENST00000578958 TRBV24-1A0A075B6N3 115 aa10.99□□□□□ -0.65
SLC9A3R1-203ENST00000578958 TNFRSF6BO95407 300 aa10.99□□□□□ -0.65
SLC9A3R1-203ENST00000578958 D6R8Y8 96 aa10.98□□□□□ -0.65
SLC9A3R1-203ENST00000578958 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
SLC9A3R1-203ENST00000578958 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
SLC9A3R1-203ENST00000578958 MT1HL1P0DM35 61 aa10.97□□□□□ -0.65
SLC9A3R1-203ENST00000578958 SMIM2Q9BVW6 85 aa10.97□□□□□ -0.65
SLC9A3R1-203ENST00000578958 PPBPP02775 128 aa10.96□□□□□ -0.65
SLC9A3R1-203ENST00000578958 RPL39P62891 51 aaKnown RBP10.96□□□□□ -0.65
SLC9A3R1-203ENST00000578958 SPAG11BQ08648 103 aa10.96□□□□□ -0.65
SLC9A3R1-203ENST00000578958 Q6ZRP5 223 aa10.96□□□□□ -0.65
SLC9A3R1-203ENST00000578958 C2orf48Q96LS8 159 aa10.96□□□□□ -0.65
SLC9A3R1-203ENST00000578958 RAB5AP20339 215 aa10.95□□□□□ -0.66
SLC9A3R1-203ENST00000578958 RPL18AQ02543 176 aaKnown RBP10.95□□□□□ -0.66
SLC9A3R1-203ENST00000578958 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
SLC9A3R1-203ENST00000578958 NPYP01303 97 aa10.94□□□□□ -0.66
SLC9A3R1-203ENST00000578958 REG3GQ6UW15 175 aa10.94□□□□□ -0.66
SLC9A3R1-203ENST00000578958 SPINK6Q6UWN8 80 aa10.94□□□□□ -0.66
SLC9A3R1-203ENST00000578958 ORMDL3Q8N138 153 aa10.94□□□□□ -0.66
SLC9A3R1-203ENST00000578958 IFITM10A6NMD0 228 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms