RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-209	ENST00000578663	NTM-AS1	Q6ZSK4	140 aa		4.62	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	GNB1L	Q9BYB4	327 aa		4.62	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	MRPL18	Q9H0U6	180 aa	Known RBP	4.62	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	GTSF1L	Q9H1H1	148 aa		4.62	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	SDHAF1	A6NFY7	115 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	TNFRSF6B	O95407	300 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	APCS	P02743	223 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	COX19	Q49B96	90 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	DAZ4	Q86SG3	579 aa	Known RBP	4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	ORMDL3	Q8N138	153 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	LINC01600	Q96MT4	127 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	PRELID3A	Q96N28	172 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	ST20	Q9HBF5	79 aa		4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	DAZ3	Q9NR90	486 aa	Known RBP	4.61	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	COLCA2	A8K830	154 aa		4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	PPBP	P02775	128 aa		4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	MT-ND6	P03923	174 aa		4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	POLR2K	P53803	58 aa	Known RBP	4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	SUMO2	P61956	95 aa	Known RBP	4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	FABP9	Q0Z7S8	132 aa		4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663		Q8N3U1	123 aa		4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	TRAPPC1	Q9Y5R8	145 aa		4.6	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	TRBV6-8	A0A0A6YYG3	113 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	TRBV27	A0A0K0K1C4	114 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	PHOX2A	O14813	284 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	PPP1R17	O96001	155 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	TSHB	P01222	138 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	PMCH	P20382	165 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	COTL1	Q14019	142 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	C20orf78	Q9BR46	151 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	SMIM2	Q9BVW6	85 aa		4.59	□□□□□ -1.67
CDK5RAP3-209	ENST00000578663	IGKV2D-24	A0A075B6R9	120 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	IGHV1-24	A0A0C4DH33	117 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	LOC389332	A0A1B0GUA5	103 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663		I3L3M4	83 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	VCY	O14598	125 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	RAB5A	P20339	215 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	RPL32	P62910	135 aa	Known RBP	4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	GAGE6	Q13070	117 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	CIRBP	Q14011	172 aa	Known RBP	4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	IQCJ	Q1A5X6	159 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	TMEM97	Q5BJF2	176 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	CHCHD7	Q9BUK0	85 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	MAP1LC3A	Q9H492	121 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	LAMTOR2	Q9Y2Q5	125 aa		4.58	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	TRBV25-1	A0A075B6N4	114 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663		A0A0J9YXV3	536 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	PRSS47	A8MTI9	375 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	TCAP	O15273	167 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	TRGC2	P03986	189 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	ESD	P10768	282 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	AMT	P48728	403 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	DGAT2L7P	Q6IED9	249 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	NIT1	Q86X76	327 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	C9orf163	Q8N9P6	203 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	CHCHD5	Q9BSY4	110 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	TMEM243	Q9BU79	118 aa		4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.57	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	FCER1G	P30273	86 aa		4.56	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	IFI27	P40305	119 aa	Predicted RBP	4.56	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	KRTAP10-8	P60410	259 aa		4.56	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	MPV17L2	Q567V2	206 aa		4.56	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663		Q8N8P6	123 aa		4.56	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	C18orf32	Q8TCD1	76 aa		4.56	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	KIR2DL4	Q99706	377 aa		4.56	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	TMEM262	E9PQX1	116 aa		4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	PANO1	I0J062	215 aa		4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	RBX1	P62877	108 aa		4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663		Q0VG73	95 aa		4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	UBE2W	Q96B02	151 aa		4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	URB1-AS1	Q96HZ7	61 aa		4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	C1orf43	Q9BWL3	253 aa		4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	NXT2	Q9NPJ8	142 aa	Known RBP	4.55	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	IGLV4-60	A0A075B6I1	120 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663		A0A087WX48	190 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	UBE2L6	O14933	153 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	FGF6	P10767	208 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	RPL39	P62891	51 aa	Known RBP	4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	SDIM1	Q6ZPB5	146 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	C20orf203	Q8NBC4	194 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	PRSS3P2	Q8NHM4	247 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	KLK12	Q9UKR0	248 aa		4.54	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	LINC01546	A6NGU7	62 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	USP17L23	D6RBM5	183 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663		H7C423	109 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	ANG	P03950	147 aa	Known RBP	4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	PKIA	P61925	76 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	AMMECR1L	Q6DCA0	310 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	RNASEK	Q6P5S7	137 aa	Known RBP	4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	REG3G	Q6UW15	175 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	CLPSL2	Q6UWE3	100 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	FA2H	Q7L5A8	372 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	C7orf33	Q8WU49	177 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663	UBE2D4	Q9Y2X8	147 aa		4.53	□□□□□ -1.68
CDK5RAP3-209	ENST00000578663		A0A1B0GUV1	79 aa		4.52	□□□□□ -1.69
CDK5RAP3-209	ENST00000578663	PRSS1	P07477	247 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms