RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 NTM-AS1Q6ZSK4 140 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 GNB1LQ9BYB4 327 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 MRPL18Q9H0U6 180 aaKnown RBP4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 GTSF1LQ9H1H1 148 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 SDHAF1A6NFY7 115 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TNFRSF6BO95407 300 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 APCSP02743 223 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 COX19Q49B96 90 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 ORMDL3Q8N138 153 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 LINC01600Q96MT4 127 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 PRELID3AQ96N28 172 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 ST20Q9HBF5 79 aa4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
CDK5RAP3-209ENST00000578663 COLCA2A8K830 154 aa4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 PPBPP02775 128 aa4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 MT-ND6P03923 174 aa4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 POLR2KP53803 58 aaKnown RBP4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 SUMO2P61956 95 aaKnown RBP4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 FABP9Q0Z7S8 132 aa4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 Q8N3U1 123 aa4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TRAPPC1Q9Y5R8 145 aa4.6□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TRBV6-8A0A0A6YYG3 113 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TRBV27A0A0K0K1C4 114 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 PHOX2AO14813 284 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 PPP1R17O96001 155 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TSHBP01222 138 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 PMCHP20382 165 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 COTL1Q14019 142 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 C20orf78Q9BR46 151 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 ALKBH7Q9BT30 221 aaPredicted RBP4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 SMIM2Q9BVW6 85 aa4.59□□□□□ -1.67
CDK5RAP3-209ENST00000578663 IGKV2D-24A0A075B6R9 120 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 IGHV1-24A0A0C4DH33 117 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 LOC389332A0A1B0GUA5 103 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 I3L3M4 83 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 VCYO14598 125 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 RAB5AP20339 215 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 RPL32P62910 135 aaKnown RBP4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 GAGE6Q13070 117 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 CIRBPQ14011 172 aaKnown RBP4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 IQCJQ1A5X6 159 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 TMEM97Q5BJF2 176 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 CHCHD7Q9BUK0 85 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 MAP1LC3AQ9H492 121 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 LAMTOR2Q9Y2Q5 125 aa4.58□□□□□ -1.68
CDK5RAP3-209ENST00000578663 TRBV25-1A0A075B6N4 114 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 IGKV2-29A2NJV5 120 aaPredicted RBP4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 TCAPO15273 167 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 TRGC2P03986 189 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 ESDP10768 282 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 AMTP48728 403 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 NIT1Q86X76 327 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 C9orf163Q8N9P6 203 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 CHCHD5Q9BSY4 110 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 TMEM243Q9BU79 118 aa4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.57□□□□□ -1.68
CDK5RAP3-209ENST00000578663 FCER1GP30273 86 aa4.56□□□□□ -1.68
CDK5RAP3-209ENST00000578663 IFI27P40305 119 aaPredicted RBP4.56□□□□□ -1.68
CDK5RAP3-209ENST00000578663 KRTAP10-8P60410 259 aa4.56□□□□□ -1.68
CDK5RAP3-209ENST00000578663 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
CDK5RAP3-209ENST00000578663 Q8N8P6 123 aa4.56□□□□□ -1.68
CDK5RAP3-209ENST00000578663 C18orf32Q8TCD1 76 aa4.56□□□□□ -1.68
CDK5RAP3-209ENST00000578663 KIR2DL4Q99706 377 aa4.56□□□□□ -1.68
CDK5RAP3-209ENST00000578663 TMEM262E9PQX1 116 aa4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 PANO1I0J062 215 aa4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 RBX1P62877 108 aa4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 Q0VG73 95 aa4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 UBE2WQ96B02 151 aa4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 C1orf43Q9BWL3 253 aa4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 NXT2Q9NPJ8 142 aaKnown RBP4.55□□□□□ -1.68
CDK5RAP3-209ENST00000578663 IGLV4-60A0A075B6I1 120 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 A0A087WX48 190 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 UBE2L6O14933 153 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 FGF6P10767 208 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 RPL39P62891 51 aaKnown RBP4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 SDIM1Q6ZPB5 146 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 C20orf203Q8NBC4 194 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 PRSS3P2Q8NHM4 247 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
CDK5RAP3-209ENST00000578663 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 USP17L23D6RBM5 183 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 H7C423 109 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 ANGP03950 147 aaKnown RBP4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 PKIAP61925 76 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 AMMECR1LQ6DCA0 310 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 RNASEKQ6P5S7 137 aaKnown RBP4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 REG3GQ6UW15 175 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 CLPSL2Q6UWE3 100 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 FA2HQ7L5A8 372 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 C7orf33Q8WU49 177 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
CDK5RAP3-209ENST00000578663 A0A1B0GUV1 79 aa4.52□□□□□ -1.69
CDK5RAP3-209ENST00000578663 PRSS1P07477 247 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms