RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 PLA2G2DQ9UNK4 145 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 HMCN2Q8NDA2 5059 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 A0A1B0GVG6 124 aa9.44□□□□□ -0.9
RN7SL560P-201ENST00000577943 PHOX2AO14813 284 aa9.44□□□□□ -0.9
RN7SL560P-201ENST00000577943 CCL25O15444 150 aa9.44□□□□□ -0.9
RN7SL560P-201ENST00000577943 RAB4AP20338 218 aa9.44□□□□□ -0.9
RN7SL560P-201ENST00000577943 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
RN7SL560P-201ENST00000577943 AMN1Q8IY45 258 aa9.44□□□□□ -0.9
RN7SL560P-201ENST00000577943 TRBV27A0A0K0K1C4 114 aa9.43□□□□□ -0.9
RN7SL560P-201ENST00000577943 SRP19P09132 144 aaKnown RBP9.43□□□□□ -0.9
RN7SL560P-201ENST00000577943 SS18Q15532 418 aa9.43□□□□□ -0.9
RN7SL560P-201ENST00000577943 STPG4Q8N801 248 aa9.43□□□□□ -0.9
RN7SL560P-201ENST00000577943 IGHV1-58A0A0C4DH39 117 aa9.42□□□□□ -0.9
RN7SL560P-201ENST00000577943 C7orf77A4D0Y5 90 aa9.42□□□□□ -0.9
RN7SL560P-201ENST00000577943 RIGQ13278 110 aa9.42□□□□□ -0.9
RN7SL560P-201ENST00000577943 MRPL52Q86TS9 123 aaKnown RBP9.42□□□□□ -0.9
RN7SL560P-201ENST00000577943 CDC42SE2Q9NRR3 84 aa9.42□□□□□ -0.9
RN7SL560P-201ENST00000577943 A0A096LNI7 61 aa9.41□□□□□ -0.9
RN7SL560P-201ENST00000577943 SMKR1H3BMG3 65 aa9.41□□□□□ -0.9
RN7SL560P-201ENST00000577943 FCER1GP30273 86 aa9.41□□□□□ -0.9
RN7SL560P-201ENST00000577943 ZNF664Q8N3J9 261 aa9.41□□□□□ -0.9
RN7SL560P-201ENST00000577943 LINC00526Q96FQ7 95 aa9.41□□□□□ -0.9
RN7SL560P-201ENST00000577943 PKIGQ9Y2B9 76 aa9.41□□□□□ -0.9
RN7SL560P-201ENST00000577943 V9GYV3 84 aa9.41□□□□□ -0.9
RN7SL560P-201ENST00000577943 VCYO14598 125 aa9.4□□□□□ -0.9
RN7SL560P-201ENST00000577943 MT1HL1P0DM35 61 aa9.4□□□□□ -0.9
RN7SL560P-201ENST00000577943 CD164L2Q6UWJ8 174 aa9.4□□□□□ -0.9
RN7SL560P-201ENST00000577943 NUP35Q8NFH5 326 aa9.4□□□□□ -0.9
RN7SL560P-201ENST00000577943 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
RN7SL560P-201ENST00000577943 ZNF561-AS1K7EIQ3 104 aa9.39□□□□□ -0.91
RN7SL560P-201ENST00000577943 PPP1R17O96001 155 aa9.39□□□□□ -0.91
RN7SL560P-201ENST00000577943 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
RN7SL560P-201ENST00000577943 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
RN7SL560P-201ENST00000577943 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
RN7SL560P-201ENST00000577943 SUMO2P61956 95 aaKnown RBP9.38□□□□□ -0.91
RN7SL560P-201ENST00000577943 SMAGPQ0VAQ4 97 aa9.38□□□□□ -0.91
RN7SL560P-201ENST00000577943 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
RN7SL560P-201ENST00000577943 KIR2DL4Q99706 377 aa9.38□□□□□ -0.91
RN7SL560P-201ENST00000577943 NAT8BQ9UHF3 227 aa9.38□□□□□ -0.91
RN7SL560P-201ENST00000577943 C1orf196B1AJZ1 125 aa9.37□□□□□ -0.91
RN7SL560P-201ENST00000577943 PPP1R2P9O14990 202 aa9.37□□□□□ -0.91
RN7SL560P-201ENST00000577943 MALP21145 153 aa9.37□□□□□ -0.91
RN7SL560P-201ENST00000577943 RPL23P62829 140 aaKnown RBP9.37□□□□□ -0.91
RN7SL560P-201ENST00000577943 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
RN7SL560P-201ENST00000577943 ADIRFQ15847 76 aa9.37□□□□□ -0.91
RN7SL560P-201ENST00000577943 NRACQ8N912 160 aa9.37□□□□□ -0.91
RN7SL560P-201ENST00000577943 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
RN7SL560P-201ENST00000577943 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
RN7SL560P-201ENST00000577943 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
RN7SL560P-201ENST00000577943 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
RN7SL560P-201ENST00000577943 COX7A2LO14548 114 aa9.35□□□□□ -0.91
RN7SL560P-201ENST00000577943 CAMPP49913 170 aa9.35□□□□□ -0.91
RN7SL560P-201ENST00000577943 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
RN7SL560P-201ENST00000577943 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
RN7SL560P-201ENST00000577943 TMEM18Q96B42 140 aa9.35□□□□□ -0.91
RN7SL560P-201ENST00000577943 IGLV4-69A0A075B6H9 119 aa9.34□□□□□ -0.91
RN7SL560P-201ENST00000577943 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
RN7SL560P-201ENST00000577943 NAT8Q9UHE5 227 aa9.34□□□□□ -0.91
RN7SL560P-201ENST00000577943 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
RN7SL560P-201ENST00000577943 SMIM27A0A1W2PRY6 76 aa9.33□□□□□ -0.92
RN7SL560P-201ENST00000577943 LINC00862A6NCI5 91 aa9.33□□□□□ -0.92
RN7SL560P-201ENST00000577943 TNXBP22105 4242 aa9.33□□□□□ -0.92
RN7SL560P-201ENST00000577943 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 C9JQL5 133 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 CKS2P33552 79 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 PTTG1IPP53801 180 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 GAGE2BQ13066 116 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 PEA15Q15121 130 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 Q6ZUT4 128 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
RN7SL560P-201ENST00000577943 A0A1B0GW15 77 aa9.31□□□□□ -0.92
RN7SL560P-201ENST00000577943 APOMO95445 188 aa9.31□□□□□ -0.92
RN7SL560P-201ENST00000577943 C5orf38Q86SI9 138 aa9.31□□□□□ -0.92
RN7SL560P-201ENST00000577943 TIMM21Q9BVV7 248 aa9.31□□□□□ -0.92
RN7SL560P-201ENST00000577943 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
RN7SL560P-201ENST00000577943 TCAPO15273 167 aa9.3□□□□□ -0.92
RN7SL560P-201ENST00000577943 SRSF3P84103 164 aaKnown RBP9.3□□□□□ -0.92
RN7SL560P-201ENST00000577943 Q6ZRP5 223 aa9.3□□□□□ -0.92
RN7SL560P-201ENST00000577943 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
RN7SL560P-201ENST00000577943 TNFRSF6BO95407 300 aa9.29□□□□□ -0.92
RN7SL560P-201ENST00000577943 S100A8P05109 93 aa9.29□□□□□ -0.92
RN7SL560P-201ENST00000577943 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
RN7SL560P-201ENST00000577943 RPL32P62910 135 aaKnown RBP9.29□□□□□ -0.92
RN7SL560P-201ENST00000577943 MRPL54Q6P161 138 aaKnown RBP9.29□□□□□ -0.92
RN7SL560P-201ENST00000577943 SPINK6Q6UWN8 80 aa9.29□□□□□ -0.92
RN7SL560P-201ENST00000577943 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
RN7SL560P-201ENST00000577943 D6R8Y8 96 aa9.28□□□□□ -0.92
RN7SL560P-201ENST00000577943 F8W036 122 aa9.28□□□□□ -0.92
RN7SL560P-201ENST00000577943 HBBP68871 147 aa9.28□□□□□ -0.92
RN7SL560P-201ENST00000577943 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
RN7SL560P-201ENST00000577943 SMDT1Q9H4I9 107 aa9.28□□□□□ -0.92
RN7SL560P-201ENST00000577943 RPL18AQ02543 176 aaKnown RBP9.27□□□□□ -0.93
RN7SL560P-201ENST00000577943 SPAG11BQ08648 103 aa9.27□□□□□ -0.93
RN7SL560P-201ENST00000577943 REG3GQ6UW15 175 aa9.27□□□□□ -0.93
RN7SL560P-201ENST00000577943 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.26□□□□□ -0.93
RN7SL560P-201ENST00000577943 NPYP01303 97 aa9.26□□□□□ -0.93
RN7SL560P-201ENST00000577943 SPANXA1Q9NS26 97 aa9.26□□□□□ -0.93
RN7SL560P-201ENST00000577943 A0A0J9YXV3 536 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms