RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 TCTE3Q8IZS6 198 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 OCC1Q8TAD7 63 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 MRAP2Q96G30 205 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 LINC00959A0A1B0GUT2 108 aa6.51□□□□□ -1.37
TVP23B-208ENST00000575261 Q6ZRP5 223 aa6.51□□□□□ -1.37
TVP23B-208ENST00000575261 SLC51BQ86UW2 128 aa6.51□□□□□ -1.37
TVP23B-208ENST00000575261 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
TVP23B-208ENST00000575261 LINC00526Q96FQ7 95 aa6.51□□□□□ -1.37
TVP23B-208ENST00000575261 FAM210AQ96ND0 272 aa6.51□□□□□ -1.37
TVP23B-208ENST00000575261 FAM231BA6NCW3 169 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 A8MWL6 223 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 ZNF561-AS1K7EIQ3 104 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 GATCO43716 136 aaKnown RBP6.5□□□□□ -1.37
TVP23B-208ENST00000575261 TSHBP01222 138 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 ESDP10768 282 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 SYCNQ0VAF6 134 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 SS18Q15532 418 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 ST20Q9HBF5 79 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 TMEM242Q9NWH2 141 aa6.5□□□□□ -1.37
TVP23B-208ENST00000575261 C7orf77A4D0Y5 90 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 TMEM250H0YL14 139 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 CAMPP49913 170 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 CT83Q5H943 113 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 CD164L2Q6UWJ8 174 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 FAM231DQ6ZW35 169 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 MRPL52Q86TS9 123 aaKnown RBP6.49□□□□□ -1.37
TVP23B-208ENST00000575261 ISOC2Q96AB3 205 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 CDC42SE2Q9NRR3 84 aa6.49□□□□□ -1.37
TVP23B-208ENST00000575261 PTTG1IPP53801 180 aa6.48□□□□□ -1.37
TVP23B-208ENST00000575261 ODF1Q14990 250 aa6.48□□□□□ -1.37
TVP23B-208ENST00000575261 NDUFA5Q16718 116 aa6.48□□□□□ -1.37
TVP23B-208ENST00000575261 ZNF664Q8N3J9 261 aa6.48□□□□□ -1.37
TVP23B-208ENST00000575261 TRBV27A0A0K0K1C4 114 aa6.47□□□□□ -1.37
TVP23B-208ENST00000575261 LOC107984640A0A0U1RRK4 108 aa6.47□□□□□ -1.37
TVP23B-208ENST00000575261 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
TVP23B-208ENST00000575261 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
TVP23B-208ENST00000575261 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
TVP23B-208ENST00000575261 TMEM191AQ9H0A3 160 aa6.47□□□□□ -1.37
TVP23B-208ENST00000575261 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 A0A1B0GUT8 65 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 C1orf196B1AJZ1 125 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 COX7A2LO14548 114 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 MALP21145 153 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 CEBPGP53567 150 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 POLR2KP53803 58 aaKnown RBP6.46□□□□□ -1.38
TVP23B-208ENST00000575261 SMAGPQ0VAQ4 97 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 GAGE2BQ13066 116 aa6.46□□□□□ -1.38
TVP23B-208ENST00000575261 APOMO95445 188 aa6.45□□□□□ -1.38
TVP23B-208ENST00000575261 FCER1GP30273 86 aa6.45□□□□□ -1.38
TVP23B-208ENST00000575261 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
TVP23B-208ENST00000575261 TSKUQ8WUA8 353 aa6.45□□□□□ -1.38
TVP23B-208ENST00000575261 CAMK2N2Q96S95 79 aa6.45□□□□□ -1.38
TVP23B-208ENST00000575261 CSDC2Q9Y534 153 aaKnown RBP6.45□□□□□ -1.38
TVP23B-208ENST00000575261 ATP6V1G1O75348 118 aa6.44□□□□□ -1.38
TVP23B-208ENST00000575261 PPP1R17O96001 155 aa6.44□□□□□ -1.38
TVP23B-208ENST00000575261 RAB4AP20338 218 aa6.44□□□□□ -1.38
TVP23B-208ENST00000575261 BLOC1S1P78537 153 aa6.44□□□□□ -1.38
TVP23B-208ENST00000575261 LINC01551Q86U37 167 aa6.44□□□□□ -1.38
TVP23B-208ENST00000575261 NUP35Q8NFH5 326 aa6.44□□□□□ -1.38
TVP23B-208ENST00000575261 SMIM7Q9BQ49 75 aa6.44□□□□□ -1.38
TVP23B-208ENST00000575261 A0A1W2PNN7 141 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 VCYO14598 125 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 SUMO2P61956 95 aaKnown RBP6.43□□□□□ -1.38
TVP23B-208ENST00000575261 IFITM2Q01629 132 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
TVP23B-208ENST00000575261 ALKAL2Q6UX46 152 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 C2orf48Q96LS8 159 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 KIR2DL4Q99706 377 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 LPAP08519 4548 aa6.43□□□□□ -1.38
TVP23B-208ENST00000575261 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 SMKR1H3BMG3 65 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.42□□□□□ -1.38
TVP23B-208ENST00000575261 MT-ND6P03923 174 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 SPAG11BQ08648 103 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 RIGQ13278 110 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
TVP23B-208ENST00000575261 RNASE13Q5GAN3 156 aaKnown RBP6.42□□□□□ -1.38
TVP23B-208ENST00000575261 Q6ZUT4 128 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 OSTCQ9NRP0 149 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
TVP23B-208ENST00000575261 ZNF727A8MUV8 499 aa6.41□□□□□ -1.38
TVP23B-208ENST00000575261 PPP1R2P9O14990 202 aa6.41□□□□□ -1.38
TVP23B-208ENST00000575261 S100A1P23297 94 aa6.41□□□□□ -1.38
TVP23B-208ENST00000575261 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
TVP23B-208ENST00000575261 NRACQ8N912 160 aa6.41□□□□□ -1.38
TVP23B-208ENST00000575261 TMEM18Q96B42 140 aa6.41□□□□□ -1.38
TVP23B-208ENST00000575261 EIF5A2Q9GZV4 153 aaKnown RBP6.41□□□□□ -1.38
TVP23B-208ENST00000575261 RNF151Q2KHN1 245 aa6.4□□□□□ -1.38
TVP23B-208ENST00000575261 C4orf48Q5BLP8 95 aa6.4□□□□□ -1.38
TVP23B-208ENST00000575261 C1orf137Q5JT78 98 aa6.4□□□□□ -1.38
TVP23B-208ENST00000575261 OR10D4PQ8NGN7 298 aa6.4□□□□□ -1.38
TVP23B-208ENST00000575261 TIMM21Q9BVV7 248 aa6.4□□□□□ -1.38
TVP23B-208ENST00000575261 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
TVP23B-208ENST00000575261 OPRPNQ99935 248 aaPredicted RBP6.39□□□□□ -1.39
TVP23B-208ENST00000575261 MRPL35Q9NZE8 188 aaKnown RBP6.39□□□□□ -1.39
TVP23B-208ENST00000575261 NAT8BQ9UHF3 227 aa6.39□□□□□ -1.39
TVP23B-208ENST00000575261 V9GYV3 84 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 361.5 ms