RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 FOXA3P55318 350 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-211ENST00000574099 EIF5AP63241 154 aaKnown RBP10.59□□□□□ -0.71
CCDC40-211ENST00000574099 CCL20P78556 96 aa10.59□□□□□ -0.71
CCDC40-211ENST00000574099 MEF2BQ02080 365 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-211ENST00000574099 EIF5AL1Q6IS14 154 aaKnown RBP10.59□□□□□ -0.71
CCDC40-211ENST00000574099 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
CCDC40-211ENST00000574099 H0Y9J4 135 aa10.58□□□□□ -0.72
CCDC40-211ENST00000574099 I3L3M4 83 aa10.58□□□□□ -0.72
CCDC40-211ENST00000574099 OPRPNQ99935 248 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-211ENST00000574099 TMEM242Q9NWH2 141 aa10.58□□□□□ -0.72
CCDC40-211ENST00000574099 TRBV20OR9-2A0A075B6H5 130 aa10.57□□□□□ -0.72
CCDC40-211ENST00000574099 SMIM12Q96EX1 92 aa10.57□□□□□ -0.72
CCDC40-211ENST00000574099 MRAP2Q96G30 205 aa10.57□□□□□ -0.72
CCDC40-211ENST00000574099 CNFNQ9BYD5 112 aa10.57□□□□□ -0.72
CCDC40-211ENST00000574099 CDC42SE2Q9NRR3 84 aa10.57□□□□□ -0.72
CCDC40-211ENST00000574099 A0A087WZ39 114 aa10.56□□□□□ -0.72
CCDC40-211ENST00000574099 TSHBP01222 138 aa10.56□□□□□ -0.72
CCDC40-211ENST00000574099 ESDP10768 282 aa10.56□□□□□ -0.72
CCDC40-211ENST00000574099 KRTAP11-1Q8IUC1 163 aa10.56□□□□□ -0.72
CCDC40-211ENST00000574099 NUDT10Q8NFP7 164 aa10.56□□□□□ -0.72
CCDC40-211ENST00000574099 NUDT11Q96G61 164 aa10.56□□□□□ -0.72
CCDC40-211ENST00000574099 IGLV1-50A0A075B6I6 118 aa10.55□□□□□ -0.72
CCDC40-211ENST00000574099 COX7A2LO14548 114 aa10.55□□□□□ -0.72
CCDC40-211ENST00000574099 BCL2L11O43521 198 aa10.55□□□□□ -0.72
CCDC40-211ENST00000574099 SMIM15Q7Z3B0 74 aa10.55□□□□□ -0.72
CCDC40-211ENST00000574099 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
CCDC40-211ENST00000574099 UBE2D1P51668 147 aa10.54□□□□□ -0.72
CCDC40-211ENST00000574099 RPP21Q9H633 154 aaKnown RBP10.54□□□□□ -0.72
CCDC40-211ENST00000574099 FAM168BA1KXE4 195 aa10.53□□□□□ -0.72
CCDC40-211ENST00000574099 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
CCDC40-211ENST00000574099 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-211ENST00000574099 TEX261Q6UWH6 196 aa10.53□□□□□ -0.72
CCDC40-211ENST00000574099 MRPL52Q86TS9 123 aaKnown RBP10.53□□□□□ -0.72
CCDC40-211ENST00000574099 RNASE7Q9H1E1 156 aaKnown RBP10.53□□□□□ -0.72
CCDC40-211ENST00000574099 BIN3Q9NQY0 253 aa10.53□□□□□ -0.72
CCDC40-211ENST00000574099 MED9Q9NWA0 146 aa10.53□□□□□ -0.72
CCDC40-211ENST00000574099 C5orf38Q86SI9 138 aa10.52□□□□□ -0.73
CCDC40-211ENST00000574099 TRBV6-5A0A0K0K1A5 114 aa10.51□□□□□ -0.73
CCDC40-211ENST00000574099 SPAG11BQ08648 103 aa10.51□□□□□ -0.73
CCDC40-211ENST00000574099 ZNF345Q14585 488 aa10.51□□□□□ -0.73
CCDC40-211ENST00000574099 FAM19A5Q7Z5A7 132 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-211ENST00000574099 C2orf48Q96LS8 159 aa10.51□□□□□ -0.73
CCDC40-211ENST00000574099 ST20Q9HBF5 79 aa10.51□□□□□ -0.73
CCDC40-211ENST00000574099 FAT4Q6V0I7 4981 aa10.51□□□□□ -0.73
CCDC40-211ENST00000574099 TRAV13-1A0A0B4J241 112 aa10.5□□□□□ -0.73
CCDC40-211ENST00000574099 TRAV1-1A0A0B4J248 108 aa10.5□□□□□ -0.73
CCDC40-211ENST00000574099 KANTRA0A1W2PQU2 76 aa10.5□□□□□ -0.73
CCDC40-211ENST00000574099 C7orf77A4D0Y5 90 aa10.5□□□□□ -0.73
CCDC40-211ENST00000574099 C1orf196B1AJZ1 125 aa10.5□□□□□ -0.73
CCDC40-211ENST00000574099 PDE6DO43924 150 aa10.49□□□□□ -0.73
CCDC40-211ENST00000574099 K7EN84 100 aa10.48□□□□□ -0.73
CCDC40-211ENST00000574099 TSKUQ8WUA8 353 aa10.48□□□□□ -0.73
CCDC40-211ENST00000574099 RPL13AP40429 203 aaKnown RBP10.47□□□□□ -0.73
CCDC40-211ENST00000574099 TSPAN13O95857 204 aa10.46□□□□□ -0.73
CCDC40-211ENST00000574099 RNF151Q2KHN1 245 aa10.46□□□□□ -0.73
CCDC40-211ENST00000574099 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
CCDC40-211ENST00000574099 UBE2BP63146 152 aa10.45□□□□□ -0.74
CCDC40-211ENST00000574099 Q6ZUT4 128 aa10.45□□□□□ -0.74
CCDC40-211ENST00000574099 TRBV27A0A0K0K1C4 114 aa10.44□□□□□ -0.74
CCDC40-211ENST00000574099 TEX46H3BTG2 121 aa10.44□□□□□ -0.74
CCDC40-211ENST00000574099 FCER1GP30273 86 aa10.44□□□□□ -0.74
CCDC40-211ENST00000574099 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
CCDC40-211ENST00000574099 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
CCDC40-211ENST00000574099 MRPL35Q9NZE8 188 aaKnown RBP10.44□□□□□ -0.74
CCDC40-211ENST00000574099 UBE2D4Q9Y2X8 147 aa10.44□□□□□ -0.74
CCDC40-211ENST00000574099 M0QXV9 152 aa10.43□□□□□ -0.74
CCDC40-211ENST00000574099 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
CCDC40-211ENST00000574099 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
CCDC40-211ENST00000574099 OR10D4PQ8NGN7 298 aa10.43□□□□□ -0.74
CCDC40-211ENST00000574099 IMMP2LQ96T52 175 aa10.43□□□□□ -0.74
CCDC40-211ENST00000574099 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
CCDC40-211ENST00000574099 KRTAP7-1Q8IUC3 87 aa10.42□□□□□ -0.74
CCDC40-211ENST00000574099 FAM210AQ96ND0 272 aa10.42□□□□□ -0.74
CCDC40-211ENST00000574099 HMSDA8MTL9 139 aa10.41□□□□□ -0.74
CCDC40-211ENST00000574099 NDUFA1O15239 70 aa10.41□□□□□ -0.74
CCDC40-211ENST00000574099 GATCO43716 136 aaKnown RBP10.41□□□□□ -0.74
CCDC40-211ENST00000574099 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
CCDC40-211ENST00000574099 SMKR1H3BMG3 65 aa10.4□□□□□ -0.74
CCDC40-211ENST00000574099 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
CCDC40-211ENST00000574099 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
CCDC40-211ENST00000574099 C6orf48Q9UBA6 75 aa10.4□□□□□ -0.74
CCDC40-211ENST00000574099 AMN1Q8IY45 258 aa10.39□□□□□ -0.75
CCDC40-211ENST00000574099 A8MWL6 223 aa10.38□□□□□ -0.75
CCDC40-211ENST00000574099 VCYO14598 125 aa10.38□□□□□ -0.75
CCDC40-211ENST00000574099 TLX1NBP0CAT3 122 aa10.38□□□□□ -0.75
CCDC40-211ENST00000574099 RAB4AP20338 218 aa10.38□□□□□ -0.75
CCDC40-211ENST00000574099 SMAGPQ0VAQ4 97 aa10.38□□□□□ -0.75
CCDC40-211ENST00000574099 SMDT1Q9H4I9 107 aa10.38□□□□□ -0.75
CCDC40-211ENST00000574099 CARHSP1Q9Y2V2 147 aaKnown RBP10.38□□□□□ -0.75
CCDC40-211ENST00000574099 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
CCDC40-211ENST00000574099 F8WDY8 70 aa10.35□□□□□ -0.75
CCDC40-211ENST00000574099 TMEM241Q24JQ0 296 aa10.35□□□□□ -0.75
CCDC40-211ENST00000574099 KIR2DL4Q99706 377 aa10.35□□□□□ -0.75
CCDC40-211ENST00000574099 IGHV3OR16-9A0A0B4J2B5 98 aa10.34□□□□□ -0.75
CCDC40-211ENST00000574099 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
CCDC40-211ENST00000574099 HIGD1CA8MV81 97 aa10.34□□□□□ -0.75
CCDC40-211ENST00000574099 SUMO2P61956 95 aaKnown RBP10.34□□□□□ -0.75
CCDC40-211ENST00000574099 FAM231DQ6ZW35 169 aa10.34□□□□□ -0.75
CCDC40-211ENST00000574099 ZNF861PO60384 105 aa10.33□□□□□ -0.76
CCDC40-211ENST00000574099 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms