RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PHOX2AO14813 284 aa13.36□□□□□ -0.27
CHRNB1-206ENST00000574054 CCL25O15444 150 aa13.36□□□□□ -0.27
CHRNB1-206ENST00000574054 Q6ZRU5 148 aa13.36□□□□□ -0.27
CHRNB1-206ENST00000574054 ESDP10768 282 aa13.35□□□□□ -0.27
CHRNB1-206ENST00000574054 OSTCQ9NRP0 149 aa13.35□□□□□ -0.27
CHRNB1-206ENST00000574054 RAB4AP20338 218 aa13.34□□□□□ -0.27
CHRNB1-206ENST00000574054 AMN1Q8IY45 258 aa13.34□□□□□ -0.27
CHRNB1-206ENST00000574054 FAM210AQ96ND0 272 aa13.34□□□□□ -0.27
CHRNB1-206ENST00000574054 IGHV1-58A0A0C4DH39 117 aa13.33□□□□□ -0.28
CHRNB1-206ENST00000574054 SS18Q15532 418 aa13.33□□□□□ -0.28
CHRNB1-206ENST00000574054 STPG4Q8N801 248 aa13.33□□□□□ -0.28
CHRNB1-206ENST00000574054 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
CHRNB1-206ENST00000574054 TRBV27A0A0K0K1C4 114 aa13.32□□□□□ -0.28
CHRNB1-206ENST00000574054 C7orf77A4D0Y5 90 aa13.32□□□□□ -0.28
CHRNB1-206ENST00000574054 SMKR1H3BMG3 65 aa13.32□□□□□ -0.28
CHRNB1-206ENST00000574054 SRP19P09132 144 aaKnown RBP13.32□□□□□ -0.28
CHRNB1-206ENST00000574054 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
CHRNB1-206ENST00000574054 A0A096LNI7 61 aa13.31□□□□□ -0.28
CHRNB1-206ENST00000574054 MT1HL1P0DM35 61 aa13.31□□□□□ -0.28
CHRNB1-206ENST00000574054 FCER1GP30273 86 aa13.31□□□□□ -0.28
CHRNB1-206ENST00000574054 RIGQ13278 110 aa13.31□□□□□ -0.28
CHRNB1-206ENST00000574054 MRPL52Q86TS9 123 aaKnown RBP13.31□□□□□ -0.28
CHRNB1-206ENST00000574054 CDC42SE2Q9NRR3 84 aa13.31□□□□□ -0.28
CHRNB1-206ENST00000574054 ZNF664Q8N3J9 261 aa13.3□□□□□ -0.28
CHRNB1-206ENST00000574054 CARD19Q96LW7 228 aa13.3□□□□□ -0.28
CHRNB1-206ENST00000574054 V9GYV3 84 aa13.3□□□□□ -0.28
CHRNB1-206ENST00000574054 UBR4Q5T4S7 5183 aa13.29□□□□□ -0.28
CHRNB1-206ENST00000574054 CD164L2Q6UWJ8 174 aa13.29□□□□□ -0.28
CHRNB1-206ENST00000574054 NUP35Q8NFH5 326 aa13.29□□□□□ -0.28
CHRNB1-206ENST00000574054 PKIGQ9Y2B9 76 aa13.29□□□□□ -0.28
CHRNB1-206ENST00000574054 ZNF561-AS1K7EIQ3 104 aa13.28□□□□□ -0.28
CHRNB1-206ENST00000574054 VCYO14598 125 aa13.28□□□□□ -0.28
CHRNB1-206ENST00000574054 TMEM241Q24JQ0 296 aa13.27□□□□□ -0.29
CHRNB1-206ENST00000574054 ISOC2Q96AB3 205 aa13.27□□□□□ -0.29
CHRNB1-206ENST00000574054 LINC00474Q9P2X8 69 aa13.27□□□□□ -0.29
CHRNB1-206ENST00000574054 PPP1R17O96001 155 aa13.26□□□□□ -0.29
CHRNB1-206ENST00000574054 SUMO2P61956 95 aaKnown RBP13.26□□□□□ -0.29
CHRNB1-206ENST00000574054 PRR3P79522 188 aaKnown RBP13.26□□□□□ -0.29
CHRNB1-206ENST00000574054 SYCNQ0VAF6 134 aa13.26□□□□□ -0.29
CHRNB1-206ENST00000574054 MALP21145 153 aa13.25□□□□□ -0.29
CHRNB1-206ENST00000574054 ADIRFQ15847 76 aa13.25□□□□□ -0.29
CHRNB1-206ENST00000574054 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
CHRNB1-206ENST00000574054 NRACQ8N912 160 aa13.25□□□□□ -0.29
CHRNB1-206ENST00000574054 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
CHRNB1-206ENST00000574054 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
CHRNB1-206ENST00000574054 RPL23P62829 140 aaKnown RBP13.24□□□□□ -0.29
CHRNB1-206ENST00000574054 SMAGPQ0VAQ4 97 aa13.24□□□□□ -0.29
CHRNB1-206ENST00000574054 FAM74A3Q4VXF1 159 aa13.24□□□□□ -0.29
CHRNB1-206ENST00000574054 C1orf196B1AJZ1 125 aa13.23□□□□□ -0.29
CHRNB1-206ENST00000574054 COX7A2LO14548 114 aa13.23□□□□□ -0.29
CHRNB1-206ENST00000574054 CAMPP49913 170 aa13.23□□□□□ -0.29
CHRNB1-206ENST00000574054 TRAV13-1A0A0B4J241 112 aa13.22□□□□□ -0.29
CHRNB1-206ENST00000574054 PPP1R2P9O14990 202 aa13.22□□□□□ -0.29
CHRNB1-206ENST00000574054 MRPL51Q4U2R6 128 aaKnown RBP13.22□□□□□ -0.29
CHRNB1-206ENST00000574054 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
CHRNB1-206ENST00000574054 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.29
CHRNB1-206ENST00000574054 FAM104BQ5XKR9 115 aa13.21□□□□□ -0.29
CHRNB1-206ENST00000574054 CSDC2Q9Y534 153 aaKnown RBP13.21□□□□□ -0.29
CHRNB1-206ENST00000574054 Q6ZUT4 128 aa13.2□□□□□ -0.3
CHRNB1-206ENST00000574054 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
CHRNB1-206ENST00000574054 TNXBP22105 4242 aa13.2□□□□□ -0.3
CHRNB1-206ENST00000574054 C9JQL5 133 aa13.19□□□□□ -0.3
CHRNB1-206ENST00000574054 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
CHRNB1-206ENST00000574054 TMEM18Q96B42 140 aa13.19□□□□□ -0.3
CHRNB1-206ENST00000574054 LOC107984640A0A0U1RRK4 108 aa13.18□□□□□ -0.3
CHRNB1-206ENST00000574054 SMIM27A0A1W2PRY6 76 aa13.18□□□□□ -0.3
CHRNB1-206ENST00000574054 CKS2P33552 79 aa13.18□□□□□ -0.3
CHRNB1-206ENST00000574054 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
CHRNB1-206ENST00000574054 C5orf38Q86SI9 138 aa13.18□□□□□ -0.3
CHRNB1-206ENST00000574054 CAMK2N2Q96S95 79 aa13.18□□□□□ -0.3
CHRNB1-206ENST00000574054 A0A1B0GVG6 124 aa13.16□□□□□ -0.3
CHRNB1-206ENST00000574054 A0A1B0GW15 77 aa13.16□□□□□ -0.3
CHRNB1-206ENST00000574054 LINC00862A6NCI5 91 aa13.16□□□□□ -0.3
CHRNB1-206ENST00000574054 SRSF3P84103 164 aaKnown RBP13.16□□□□□ -0.3
CHRNB1-206ENST00000574054 PEA15Q15121 130 aa13.16□□□□□ -0.3
CHRNB1-206ENST00000574054 C20orf78Q9BR46 151 aa13.16□□□□□ -0.3
CHRNB1-206ENST00000574054 TIMM21Q9BVV7 248 aa13.16□□□□□ -0.3
CHRNB1-206ENST00000574054 LINC01600Q96MT4 127 aa13.15□□□□□ -0.3
CHRNB1-206ENST00000574054 APOMO95445 188 aa13.14□□□□□ -0.31
CHRNB1-206ENST00000574054 RPL39P62891 51 aaKnown RBP13.14□□□□□ -0.31
CHRNB1-206ENST00000574054 MRPL54Q6P161 138 aaKnown RBP13.14□□□□□ -0.31
CHRNB1-206ENST00000574054 Q6ZRP5 223 aa13.14□□□□□ -0.31
CHRNB1-206ENST00000574054 TRBV24-1A0A075B6N3 115 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 D6R8Y8 96 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 TCAPO15273 167 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 TNFRSF6BO95407 300 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 RPL32P62910 135 aaKnown RBP13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 HBBP68871 147 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 SPINK6Q6UWN8 80 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 SMIM2Q9BVW6 85 aa13.13□□□□□ -0.31
CHRNB1-206ENST00000574054 F8W036 122 aa13.12□□□□□ -0.31
CHRNB1-206ENST00000574054 S100A8P05109 93 aa13.12□□□□□ -0.31
CHRNB1-206ENST00000574054 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
CHRNB1-206ENST00000574054 C2orf48Q96LS8 159 aa13.12□□□□□ -0.31
CHRNB1-206ENST00000574054 REG3GQ6UW15 175 aa13.11□□□□□ -0.31
CHRNB1-206ENST00000574054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.1□□□□□ -0.31
CHRNB1-206ENST00000574054 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
CHRNB1-206ENST00000574054 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
CHRNB1-206ENST00000574054 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms