RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 BTF3L4Q96K17 158 aa13.63□□□□□ -0.23
SNF8-216ENST00000573795 TMEM101Q96IK0 257 aa13.62□□□□□ -0.23
SNF8-216ENST00000573795 CDC42SE2Q9NRR3 84 aa13.62□□□□□ -0.23
SNF8-216ENST00000573795 MRPL52Q86TS9 123 aaKnown RBP13.61□□□□□ -0.23
SNF8-216ENST00000573795 TCTE3Q8IZS6 198 aa13.61□□□□□ -0.23
SNF8-216ENST00000573795 A8MWL6 223 aa13.6□□□□□ -0.23
SNF8-216ENST00000573795 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
SNF8-216ENST00000573795 CD164L2Q6UWJ8 174 aa13.6□□□□□ -0.23
SNF8-216ENST00000573795 MRAP2Q96G30 205 aa13.6□□□□□ -0.23
SNF8-216ENST00000573795 ST20Q9HBF5 79 aa13.6□□□□□ -0.23
SNF8-216ENST00000573795 TMEM250H0YL14 139 aa13.59□□□□□ -0.23
SNF8-216ENST00000573795 SYCNQ0VAF6 134 aa13.59□□□□□ -0.23
SNF8-216ENST00000573795 CT83Q5H943 113 aa13.59□□□□□ -0.23
SNF8-216ENST00000573795 PKIGQ9Y2B9 76 aa13.59□□□□□ -0.23
SNF8-216ENST00000573795 PTTG1IPP53801 180 aa13.58□□□□□ -0.24
SNF8-216ENST00000573795 SS18Q15532 418 aa13.58□□□□□ -0.24
SNF8-216ENST00000573795 REG3GQ6UW15 175 aa13.58□□□□□ -0.24
SNF8-216ENST00000573795 Q6ZRP5 223 aa13.58□□□□□ -0.24
SNF8-216ENST00000573795 LPAP08519 4548 aa13.58□□□□□ -0.24
SNF8-216ENST00000573795 TRBV27A0A0K0K1C4 114 aa13.57□□□□□ -0.24
SNF8-216ENST00000573795 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
SNF8-216ENST00000573795 TMEM191AQ9H0A3 160 aa13.57□□□□□ -0.24
SNF8-216ENST00000573795 ZNF561-AS1K7EIQ3 104 aa13.56□□□□□ -0.24
SNF8-216ENST00000573795 CAMPP49913 170 aa13.56□□□□□ -0.24
SNF8-216ENST00000573795 FAM210AQ96ND0 272 aa13.56□□□□□ -0.24
SNF8-216ENST00000573795 C7orf77A4D0Y5 90 aa13.55□□□□□ -0.24
SNF8-216ENST00000573795 RAB4AP20338 218 aa13.55□□□□□ -0.24
SNF8-216ENST00000573795 IGLV4-69A0A075B6H9 119 aa13.54□□□□□ -0.24
SNF8-216ENST00000573795 A0A1W2PNN7 141 aa13.54□□□□□ -0.24
SNF8-216ENST00000573795 A0A1B0GUT8 65 aa13.53□□□□□ -0.24
SNF8-216ENST00000573795 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
SNF8-216ENST00000573795 GAGE2BQ13066 116 aa13.53□□□□□ -0.24
SNF8-216ENST00000573795 AMN1Q8IY45 258 aa13.53□□□□□ -0.24
SNF8-216ENST00000573795 LOC107984640A0A0U1RRK4 108 aa13.52□□□□□ -0.25
SNF8-216ENST00000573795 SMKR1H3BMG3 65 aa13.52□□□□□ -0.25
SNF8-216ENST00000573795 NUP35Q8NFH5 326 aa13.52□□□□□ -0.25
SNF8-216ENST00000573795 TSKUQ8WUA8 353 aa13.52□□□□□ -0.25
SNF8-216ENST00000573795 BORCS7Q96B45 105 aa13.52□□□□□ -0.25
SNF8-216ENST00000573795 CEBPGP53567 150 aa13.51□□□□□ -0.25
SNF8-216ENST00000573795 LINC01551Q86U37 167 aa13.51□□□□□ -0.25
SNF8-216ENST00000573795 UBE2D4Q9Y2X8 147 aa13.51□□□□□ -0.25
SNF8-216ENST00000573795 RNASE13Q5GAN3 156 aaKnown RBP13.5□□□□□ -0.25
SNF8-216ENST00000573795 ALKAL2Q6UX46 152 aa13.5□□□□□ -0.25
SNF8-216ENST00000573795 NRACQ8N912 160 aa13.5□□□□□ -0.25
SNF8-216ENST00000573795 ISOC2Q96AB3 205 aa13.5□□□□□ -0.25
SNF8-216ENST00000573795 C1orf196B1AJZ1 125 aa13.49□□□□□ -0.25
SNF8-216ENST00000573795 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.49□□□□□ -0.25
SNF8-216ENST00000573795 COX7A2LO14548 114 aa13.49□□□□□ -0.25
SNF8-216ENST00000573795 CSDC2Q9Y534 153 aaKnown RBP13.49□□□□□ -0.25
SNF8-216ENST00000573795 MALP21145 153 aa13.48□□□□□ -0.25
SNF8-216ENST00000573795 BLOC1S1P78537 153 aa13.48□□□□□ -0.25
SNF8-216ENST00000573795 SMIM7Q9BQ49 75 aa13.48□□□□□ -0.25
SNF8-216ENST00000573795 PSORS1C2Q9UIG4 136 aa13.48□□□□□ -0.25
SNF8-216ENST00000573795 VCYO14598 125 aa13.47□□□□□ -0.25
SNF8-216ENST00000573795 APOMO95445 188 aa13.47□□□□□ -0.25
SNF8-216ENST00000573795 C9orf116Q5BN46 136 aaPredicted RBP13.47□□□□□ -0.25
SNF8-216ENST00000573795 Q6ZUT4 128 aa13.47□□□□□ -0.25
SNF8-216ENST00000573795 CAMK2N2Q96S95 79 aa13.47□□□□□ -0.25
SNF8-216ENST00000573795 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
SNF8-216ENST00000573795 C2orf48Q96LS8 159 aa13.46□□□□□ -0.25
SNF8-216ENST00000573795 TRAV13-1A0A0B4J241 112 aa13.45□□□□□ -0.26
SNF8-216ENST00000573795 FCER1GP30273 86 aa13.45□□□□□ -0.26
SNF8-216ENST00000573795 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
SNF8-216ENST00000573795 C5orf38Q86SI9 138 aa13.45□□□□□ -0.26
SNF8-216ENST00000573795 V9GYV3 84 aa13.45□□□□□ -0.26
SNF8-216ENST00000573795 PHF5AQ7RTV0 110 aaKnown RBP13.43□□□□□ -0.26
SNF8-216ENST00000573795 OPRPNQ99935 248 aaPredicted RBP13.43□□□□□ -0.26
SNF8-216ENST00000573795 ZNF727A8MUV8 499 aa13.42□□□□□ -0.26
SNF8-216ENST00000573795 RPL18AQ02543 176 aaKnown RBP13.42□□□□□ -0.26
SNF8-216ENST00000573795 SPAG11BQ08648 103 aa13.42□□□□□ -0.26
SNF8-216ENST00000573795 RIGQ13278 110 aa13.42□□□□□ -0.26
SNF8-216ENST00000573795 FAM104AQ969W3 186 aa13.42□□□□□ -0.26
SNF8-216ENST00000573795 MT-ND6P03923 174 aa13.41□□□□□ -0.26
SNF8-216ENST00000573795 SRP19P09132 144 aaKnown RBP13.41□□□□□ -0.26
SNF8-216ENST00000573795 KIR2DL4Q99706 377 aa13.41□□□□□ -0.26
SNF8-216ENST00000573795 TIMM21Q9BVV7 248 aa13.41□□□□□ -0.26
SNF8-216ENST00000573795 EIF5A2Q9GZV4 153 aaKnown RBP13.41□□□□□ -0.26
SNF8-216ENST00000573795 PPP1R17O96001 155 aa13.4□□□□□ -0.26
SNF8-216ENST00000573795 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
SNF8-216ENST00000573795 MRPL51Q4U2R6 128 aaKnown RBP13.4□□□□□ -0.26
SNF8-216ENST00000573795 RNF151Q2KHN1 245 aa13.39□□□□□ -0.27
SNF8-216ENST00000573795 C1orf137Q5JT78 98 aa13.39□□□□□ -0.27
SNF8-216ENST00000573795 PPP1R2P9O14990 202 aa13.38□□□□□ -0.27
SNF8-216ENST00000573795 FAM104BQ5XKR9 115 aa13.38□□□□□ -0.27
SNF8-216ENST00000573795 KRTAP11-1Q8IUC1 163 aa13.38□□□□□ -0.27
SNF8-216ENST00000573795 RPL39P62891 51 aaKnown RBP13.37□□□□□ -0.27
SNF8-216ENST00000573795 OR10D4PQ8NGN7 298 aa13.37□□□□□ -0.27
SNF8-216ENST00000573795 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
SNF8-216ENST00000573795 NAT8BQ9UHF3 227 aa13.36□□□□□ -0.27
SNF8-216ENST00000573795 TRBV24-1A0A075B6N3 115 aa13.35□□□□□ -0.27
SNF8-216ENST00000573795 IGHV3OR16-9A0A0B4J2B5 98 aa13.35□□□□□ -0.27
SNF8-216ENST00000573795 FAM168BA1KXE4 195 aa13.35□□□□□ -0.27
SNF8-216ENST00000573795 RPL32P62910 135 aaKnown RBP13.35□□□□□ -0.27
SNF8-216ENST00000573795 C10orf25Q5T742 122 aa13.35□□□□□ -0.27
SNF8-216ENST00000573795 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
SNF8-216ENST00000573795 ORAOV1Q8WV07 137 aa13.35□□□□□ -0.27
SNF8-216ENST00000573795 C20orf78Q9BR46 151 aa13.35□□□□□ -0.27
SNF8-216ENST00000573795 IGLV7-43P04211 117 aa13.34□□□□□ -0.27
SNF8-216ENST00000573795 RPL23P62829 140 aaKnown RBP13.34□□□□□ -0.27
SNF8-216ENST00000573795 TMEM18Q96B42 140 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms