RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 FCER1GP30273 86 aa8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 CKS2P33552 79 aa8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 CNBPP62633 177 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 DPH3Q96FX2 82 aa8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 D6R8Y8 96 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 F8W036 122 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 PANO1I0J062 215 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 MT-ND4LP03901 98 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 S100A8P05109 93 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 PNRC1Q12796 327 aaPredicted RBP8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 HIGD2BQ4VC39 106 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 SDIM1Q6ZPB5 146 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 C15orf56Q8N910 161 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
NPLOC4-213ENST00000573519 C7orf77A4D0Y5 90 aa8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 LINC00862A6NCI5 91 aa8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 SLPIP03973 132 aa8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 XCL1P47992 114 aa8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 RPL37AP61513 92 aaKnown RBP8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 ANAPC16Q96DE5 110 aa8.15□□□□□ -1.1
NPLOC4-213ENST00000573519 TMEM218A2RU14 115 aa8.14□□□□□ -1.11
NPLOC4-213ENST00000573519 CCL25O15444 150 aa8.14□□□□□ -1.11
NPLOC4-213ENST00000573519 NPYP01303 97 aa8.14□□□□□ -1.11
NPLOC4-213ENST00000573519 KIR2DL4Q99706 377 aa8.14□□□□□ -1.11
NPLOC4-213ENST00000573519 HERC1Q15751 4861 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 TRBV24-1A0A075B6N3 115 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 FOXI1Q12951 378 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 SS18Q15532 418 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 UQCC3Q6UW78 93 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 ATP5L2Q7Z4Y8 100 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 C20orf78Q9BR46 151 aa8.13□□□□□ -1.11
NPLOC4-213ENST00000573519 CHTF8P0CG12 524 aa8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 RNASE13Q5GAN3 156 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 TMEM136Q6ZRR5 245 aa8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 MRPL52Q86TS9 123 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 COMMD7Q86VX2 200 aa8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 ZNF664Q8N3J9 261 aa8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 SMIM2Q9BVW6 85 aa8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 CDC42SE2Q9NRR3 84 aa8.12□□□□□ -1.11
NPLOC4-213ENST00000573519 TCAPO15273 167 aa8.11□□□□□ -1.11
NPLOC4-213ENST00000573519 RPL32P62910 135 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-213ENST00000573519 COX6A2Q02221 97 aa8.11□□□□□ -1.11
NPLOC4-213ENST00000573519 ORMDL3Q8N138 153 aa8.11□□□□□ -1.11
NPLOC4-213ENST00000573519 PRELID3AQ96N28 172 aa8.11□□□□□ -1.11
NPLOC4-213ENST00000573519 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-213ENST00000573519 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-213ENST00000573519 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-213ENST00000573519 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-213ENST00000573519 PPBPP02775 128 aa8.1□□□□□ -1.11
NPLOC4-213ENST00000573519 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-213ENST00000573519 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
NPLOC4-213ENST00000573519 UBE2D4Q9Y2X8 147 aa8.1□□□□□ -1.11
NPLOC4-213ENST00000573519 A0A087WYN8 130 aa8.09□□□□□ -1.11
NPLOC4-213ENST00000573519 IGHV1-58A0A0C4DH39 117 aa8.09□□□□□ -1.11
NPLOC4-213ENST00000573519 IGKV2-24A0A0C4DH68 120 aa8.09□□□□□ -1.11
NPLOC4-213ENST00000573519 CIRBPQ14011 172 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-213ENST00000573519 SPACA4Q8TDM5 124 aa8.09□□□□□ -1.11
NPLOC4-213ENST00000573519 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
NPLOC4-213ENST00000573519 LOC389332A0A1B0GUA5 103 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 PHOX2AO14813 284 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 MAJINQ3KP22 176 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 CD164L2Q6UWJ8 174 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 Q6ZUT4 128 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 PRSS3P2Q8NHM4 247 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 TMEM18Q96B42 140 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 SEC11CQ9BY50 192 aa8.08□□□□□ -1.12
NPLOC4-213ENST00000573519 TRAV13-1A0A0B4J241 112 aa8.07□□□□□ -1.12
NPLOC4-213ENST00000573519 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
NPLOC4-213ENST00000573519 MALP21145 153 aa8.07□□□□□ -1.12
NPLOC4-213ENST00000573519 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
NPLOC4-213ENST00000573519 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
NPLOC4-213ENST00000573519 C1orf196B1AJZ1 125 aa8.06□□□□□ -1.12
NPLOC4-213ENST00000573519 RAB5AP20339 215 aa8.06□□□□□ -1.12
NPLOC4-213ENST00000573519 HNRNPA3P51991 378 aaKnown RBP8.06□□□□□ -1.12
NPLOC4-213ENST00000573519 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
NPLOC4-213ENST00000573519 IMMP2LQ96T52 175 aa8.06□□□□□ -1.12
NPLOC4-213ENST00000573519 TIMM21Q9BVV7 248 aa8.06□□□□□ -1.12
NPLOC4-213ENST00000573519 CTDSP1Q9GZU7 261 aa8.06□□□□□ -1.12
NPLOC4-213ENST00000573519 COX7A2LO14548 114 aa8.05□□□□□ -1.12
NPLOC4-213ENST00000573519 KIAA1644Q3SXP7 199 aa8.05□□□□□ -1.12
NPLOC4-213ENST00000573519 FAM104AQ969W3 186 aa8.05□□□□□ -1.12
NPLOC4-213ENST00000573519 MAP1LC3AQ9H492 121 aa8.05□□□□□ -1.12
NPLOC4-213ENST00000573519 A0A096LNI7 61 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 OXTP01178 125 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 STPG4Q8N801 248 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 C7orf33Q8WU49 177 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 LAMTOR2Q9Y2Q5 125 aa8.04□□□□□ -1.12
NPLOC4-213ENST00000573519 IGLV4-69A0A075B6H9 119 aa8.03□□□□□ -1.12
NPLOC4-213ENST00000573519 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms