RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 HIGD2BQ4VC39 106 aa11.88□□□□□ -0.51
SCARF1-204ENST00000570902 NUP35Q8NFH5 326 aa11.88□□□□□ -0.51
SCARF1-204ENST00000570902 LINC00474Q9P2X8 69 aa11.88□□□□□ -0.51
SCARF1-204ENST00000570902 KRTAP10-8P60410 259 aa11.87□□□□□ -0.51
SCARF1-204ENST00000570902 ODF1Q14990 250 aa11.87□□□□□ -0.51
SCARF1-204ENST00000570902 PKIGQ9Y2B9 76 aa11.87□□□□□ -0.51
SCARF1-204ENST00000570902 CLLU1Q5K131 121 aa11.86□□□□□ -0.51
SCARF1-204ENST00000570902 GVQW2A0A096LPI5 108 aaPredicted RBP11.85□□□□□ -0.51
SCARF1-204ENST00000570902 IGKV3OR2-268A0A0C4DH90 116 aa11.85□□□□□ -0.51
SCARF1-204ENST00000570902 IFITM2Q01629 132 aa11.85□□□□□ -0.51
SCARF1-204ENST00000570902 RIGQ13278 110 aa11.85□□□□□ -0.51
SCARF1-204ENST00000570902 TMEM191AQ9H0A3 160 aa11.85□□□□□ -0.51
SCARF1-204ENST00000570902 NAT8BQ9UHF3 227 aa11.85□□□□□ -0.51
SCARF1-204ENST00000570902 SMIM27A0A1W2PRY6 76 aa11.84□□□□□ -0.51
SCARF1-204ENST00000570902 CHCHD10Q8WYQ3 142 aaPredicted RBP11.84□□□□□ -0.51
SCARF1-204ENST00000570902 A0A096LNI7 61 aa11.83□□□□□ -0.52
SCARF1-204ENST00000570902 SDHAF1A6NFY7 115 aa11.83□□□□□ -0.52
SCARF1-204ENST00000570902 GAS8-AS1O95177 125 aa11.83□□□□□ -0.52
SCARF1-204ENST00000570902 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
SCARF1-204ENST00000570902 AMN1Q8IY45 258 aa11.82□□□□□ -0.52
SCARF1-204ENST00000570902 RAB4AP20338 218 aa11.81□□□□□ -0.52
SCARF1-204ENST00000570902 Q6ZRP5 223 aa11.81□□□□□ -0.52
SCARF1-204ENST00000570902 PMCHP20382 165 aa11.8□□□□□ -0.52
SCARF1-204ENST00000570902 SRSF9Q13242 221 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCARF1-204ENST00000570902 ST20Q9HBF5 79 aa11.8□□□□□ -0.52
SCARF1-204ENST00000570902 TRBV6-5A0A0K0K1A5 114 aa11.79□□□□□ -0.52
SCARF1-204ENST00000570902 H7C423 109 aa11.79□□□□□ -0.52
SCARF1-204ENST00000570902 I3L3M4 83 aa11.79□□□□□ -0.52
SCARF1-204ENST00000570902 NCR2O95944 276 aa11.79□□□□□ -0.52
SCARF1-204ENST00000570902 APCSP02743 223 aa11.79□□□□□ -0.52
SCARF1-204ENST00000570902 CAMPP49913 170 aa11.79□□□□□ -0.52
SCARF1-204ENST00000570902 RNASEKQ6P5S7 137 aaKnown RBP11.79□□□□□ -0.52
SCARF1-204ENST00000570902 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.78□□□□□ -0.52
SCARF1-204ENST00000570902 IGKV2-29A2NJV5 120 aaPredicted RBP11.78□□□□□ -0.52
SCARF1-204ENST00000570902 SMKR1H3BMG3 65 aa11.78□□□□□ -0.52
SCARF1-204ENST00000570902 FOXI1Q12951 378 aa11.78□□□□□ -0.52
SCARF1-204ENST00000570902 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
SCARF1-204ENST00000570902 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
SCARF1-204ENST00000570902 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
SCARF1-204ENST00000570902 TMEM242Q9NWH2 141 aa11.76□□□□□ -0.53
SCARF1-204ENST00000570902 IGHV1-58A0A0C4DH39 117 aa11.75□□□□□ -0.53
SCARF1-204ENST00000570902 A0A1B0GW15 77 aa11.75□□□□□ -0.53
SCARF1-204ENST00000570902 PPP1R2P9O14990 202 aa11.75□□□□□ -0.53
SCARF1-204ENST00000570902 FGF6P10767 208 aa11.75□□□□□ -0.53
SCARF1-204ENST00000570902 FAM104BQ5XKR9 115 aa11.75□□□□□ -0.53
SCARF1-204ENST00000570902 MRPL54Q6P161 138 aaKnown RBP11.75□□□□□ -0.53
SCARF1-204ENST00000570902 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
SCARF1-204ENST00000570902 TSHBP01222 138 aa11.74□□□□□ -0.53
SCARF1-204ENST00000570902 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
SCARF1-204ENST00000570902 XCL1P47992 114 aa11.74□□□□□ -0.53
SCARF1-204ENST00000570902 POLR2KP53803 58 aaKnown RBP11.74□□□□□ -0.53
SCARF1-204ENST00000570902 MRPL51Q4U2R6 128 aaKnown RBP11.74□□□□□ -0.53
SCARF1-204ENST00000570902 MT-ND4LP03901 98 aa11.73□□□□□ -0.53
SCARF1-204ENST00000570902 HBBP68871 147 aa11.73□□□□□ -0.53
SCARF1-204ENST00000570902 UQCC3Q6UW78 93 aa11.73□□□□□ -0.53
SCARF1-204ENST00000570902 NRACQ8N912 160 aa11.73□□□□□ -0.53
SCARF1-204ENST00000570902 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
SCARF1-204ENST00000570902 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
SCARF1-204ENST00000570902 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
SCARF1-204ENST00000570902 S100A8P05109 93 aa11.72□□□□□ -0.53
SCARF1-204ENST00000570902 ANAPC16Q96DE5 110 aa11.72□□□□□ -0.53
SCARF1-204ENST00000570902 TMEM101Q96IK0 257 aa11.72□□□□□ -0.53
SCARF1-204ENST00000570902 TMEM218A2RU14 115 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 ZNF561-AS1K7EIQ3 104 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 CCL25O15444 150 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 PPP1R17O96001 155 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 ESDP10768 282 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 ADCYAP1P18509 176 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 SYCNQ0VAF6 134 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 LINC00526Q96FQ7 95 aa11.71□□□□□ -0.53
SCARF1-204ENST00000570902 LINC00959A0A1B0GUT2 108 aa11.7□□□□□ -0.54
SCARF1-204ENST00000570902 F8W036 122 aa11.7□□□□□ -0.54
SCARF1-204ENST00000570902 VCYO14598 125 aa11.7□□□□□ -0.54
SCARF1-204ENST00000570902 FCER1GP30273 86 aa11.7□□□□□ -0.54
SCARF1-204ENST00000570902 CKS2P33552 79 aa11.7□□□□□ -0.54
SCARF1-204ENST00000570902 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
SCARF1-204ENST00000570902 SUMO2P61956 95 aaKnown RBP11.7□□□□□ -0.54
SCARF1-204ENST00000570902 LINC00862A6NCI5 91 aa11.69□□□□□ -0.54
SCARF1-204ENST00000570902 LOC107984640A0A0U1RRK4 108 aa11.68□□□□□ -0.54
SCARF1-204ENST00000570902 C7orf77A4D0Y5 90 aa11.68□□□□□ -0.54
SCARF1-204ENST00000570902 SS18Q15532 418 aa11.68□□□□□ -0.54
SCARF1-204ENST00000570902 ATP5L2Q7Z4Y8 100 aa11.68□□□□□ -0.54
SCARF1-204ENST00000570902 COMMD7Q86VX2 200 aa11.68□□□□□ -0.54
SCARF1-204ENST00000570902 LPAP08519 4548 aa11.67□□□□□ -0.54
SCARF1-204ENST00000570902 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
SCARF1-204ENST00000570902 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
SCARF1-204ENST00000570902 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
SCARF1-204ENST00000570902 KIR2DL4Q99706 377 aa11.67□□□□□ -0.54
SCARF1-204ENST00000570902 TRBV24-1A0A075B6N3 115 aa11.66□□□□□ -0.54
SCARF1-204ENST00000570902 D6R8Y8 96 aa11.66□□□□□ -0.54
SCARF1-204ENST00000570902 C20orf78Q9BR46 151 aa11.66□□□□□ -0.54
SCARF1-204ENST00000570902 TNFRSF6BO95407 300 aa11.65□□□□□ -0.54
SCARF1-204ENST00000570902 MT-ND6P03923 174 aa11.65□□□□□ -0.54
SCARF1-204ENST00000570902 MRPL52Q86TS9 123 aaKnown RBP11.64□□□□□ -0.55
SCARF1-204ENST00000570902 SEC11CQ9BY50 192 aa11.64□□□□□ -0.55
SCARF1-204ENST00000570902 PSORS1C2Q9UIG4 136 aa11.64□□□□□ -0.55
SCARF1-204ENST00000570902 NPYP01303 97 aa11.63□□□□□ -0.55
SCARF1-204ENST00000570902 PPBPP02775 128 aa11.63□□□□□ -0.55
SCARF1-204ENST00000570902 CDC42SE2Q9NRR3 84 aa11.63□□□□□ -0.55
SCARF1-204ENST00000570902 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms