RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	NUP35	Q8NFH5	326 aa		10.38	□□□□□ -0.75
PKM-223	ENST00000569050	CNFN	Q9BYD5	112 aa		10.38	□□□□□ -0.75
PKM-223	ENST00000569050	TRBV25-1	A0A075B6N4	114 aa		10.37	□□□□□ -0.75
PKM-223	ENST00000569050	FOXA3	P55318	350 aa	Predicted RBP	10.37	□□□□□ -0.75
PKM-223	ENST00000569050	SUMO4	Q6EEV6	95 aa		10.37	□□□□□ -0.75
PKM-223	ENST00000569050	NAT8B	Q9UHF3	227 aa		10.37	□□□□□ -0.75
PKM-223	ENST00000569050		A0A1B0GUT8	65 aa		10.36	□□□□□ -0.75
PKM-223	ENST00000569050	HIGD2B	Q4VC39	106 aa		10.36	□□□□□ -0.75
PKM-223	ENST00000569050	SMIM15	Q7Z3B0	74 aa		10.36	□□□□□ -0.75
PKM-223	ENST00000569050	IGLV4-60	A0A075B6I1	120 aa		10.35	□□□□□ -0.75
PKM-223	ENST00000569050	TRAV26-2	A0A0B4J265	109 aa		10.35	□□□□□ -0.75
PKM-223	ENST00000569050	SMIM27	A0A1W2PRY6	76 aa		10.35	□□□□□ -0.75
PKM-223	ENST00000569050	IQCJ	Q1A5X6	159 aa		10.35	□□□□□ -0.75
PKM-223	ENST00000569050	MRPL54	Q6P161	138 aa	Known RBP	10.34	□□□□□ -0.75
PKM-223	ENST00000569050	SEC11C	Q9BY50	192 aa		10.34	□□□□□ -0.75
PKM-223	ENST00000569050	IGHV1-24	A0A0C4DH33	117 aa		10.33	□□□□□ -0.76
PKM-223	ENST00000569050	PPP1R2P9	O14990	202 aa		10.33	□□□□□ -0.76
PKM-223	ENST00000569050	MT-ND4L	P03901	98 aa		10.33	□□□□□ -0.76
PKM-223	ENST00000569050	RIG	Q13278	110 aa		10.33	□□□□□ -0.76
PKM-223	ENST00000569050	ZNF664	Q8N3J9	261 aa		10.33	□□□□□ -0.76
PKM-223	ENST00000569050	PSORS1C2	Q9UIG4	136 aa		10.33	□□□□□ -0.76
PKM-223	ENST00000569050	CAMP	P49913	170 aa		10.32	□□□□□ -0.76
PKM-223	ENST00000569050	PRR26	Q8N8Z3	221 aa		10.32	□□□□□ -0.76
PKM-223	ENST00000569050	ANAPC16	Q96DE5	110 aa		10.32	□□□□□ -0.76
PKM-223	ENST00000569050	GAGE12H	A6NDE8	117 aa		10.31	□□□□□ -0.76
PKM-223	ENST00000569050		M0QY20	66 aa		10.31	□□□□□ -0.76
PKM-223	ENST00000569050	CFAP161	Q6P656	301 aa		10.31	□□□□□ -0.76
PKM-223	ENST00000569050	AMN1	Q8IY45	258 aa		10.31	□□□□□ -0.76
PKM-223	ENST00000569050		A0A1B0GUV1	79 aa		10.3	□□□□□ -0.76
PKM-223	ENST00000569050	PRR4	Q16378	134 aa		10.3	□□□□□ -0.76
PKM-223	ENST00000569050	RASL11A	Q6T310	242 aa		10.3	□□□□□ -0.76
PKM-223	ENST00000569050	RPL39L	Q96EH5	51 aa	Known RBP	10.3	□□□□□ -0.76
PKM-223	ENST00000569050	LINC00474	Q9P2X8	69 aa		10.3	□□□□□ -0.76
PKM-223	ENST00000569050	NCR2	O95944	276 aa		10.29	□□□□□ -0.76
PKM-223	ENST00000569050	GATD1	Q8NB37	220 aa		10.29	□□□□□ -0.76
PKM-223	ENST00000569050	TMEM191A	Q9H0A3	160 aa		10.29	□□□□□ -0.76
PKM-223	ENST00000569050	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.29	□□□□□ -0.76
PKM-223	ENST00000569050	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.28	□□□□□ -0.76
PKM-223	ENST00000569050	SMKR1	H3BMG3	65 aa		10.28	□□□□□ -0.76
PKM-223	ENST00000569050	HBB	P68871	147 aa		10.28	□□□□□ -0.76
PKM-223	ENST00000569050	APOC3	P02656	99 aa		10.27	□□□□□ -0.77
PKM-223	ENST00000569050	C10orf91	Q5T1B1	145 aa		10.27	□□□□□ -0.77
PKM-223	ENST00000569050	SLC7A5P1	Q8MH63	180 aa		10.27	□□□□□ -0.77
PKM-223	ENST00000569050	TMEM243	Q9BU79	118 aa		10.27	□□□□□ -0.77
PKM-223	ENST00000569050		A0A1B0GXF2	115 aa		10.26	□□□□□ -0.77
PKM-223	ENST00000569050	RAB4A	P20338	218 aa		10.26	□□□□□ -0.77
PKM-223	ENST00000569050	NDUFA5	Q16718	116 aa		10.26	□□□□□ -0.77
PKM-223	ENST00000569050	RPS10P5	Q9NQ39	176 aa		10.26	□□□□□ -0.77
PKM-223	ENST00000569050	NIT2	Q9NQR4	276 aa		10.26	□□□□□ -0.77
PKM-223	ENST00000569050	MUC17	Q685J3	4493 aa		10.25	□□□□□ -0.77
PKM-223	ENST00000569050	C7orf77	A4D0Y5	90 aa		10.25	□□□□□ -0.77
PKM-223	ENST00000569050	CTDSP1	Q9GZU7	261 aa		10.25	□□□□□ -0.77
PKM-223	ENST00000569050	IGKV3OR2-268	A0A0C4DH90	116 aa		10.24	□□□□□ -0.77
PKM-223	ENST00000569050		A0A1B0GW15	77 aa		10.24	□□□□□ -0.77
PKM-223	ENST00000569050	S100A8	P05109	93 aa		10.24	□□□□□ -0.77
PKM-223	ENST00000569050	RHEB	Q15382	184 aa		10.24	□□□□□ -0.77
PKM-223	ENST00000569050	MRPL51	Q4U2R6	128 aa	Known RBP	10.24	□□□□□ -0.77
PKM-223	ENST00000569050	ATP5L2	Q7Z4Y8	100 aa		10.24	□□□□□ -0.77
PKM-223	ENST00000569050	FAM104B	Q5XKR9	115 aa		10.23	□□□□□ -0.77
PKM-223	ENST00000569050	MRAP2	Q96G30	205 aa		10.23	□□□□□ -0.77
PKM-223	ENST00000569050	BTF3L4	Q96K17	158 aa		10.23	□□□□□ -0.77
PKM-223	ENST00000569050	SVBP	Q8N300	66 aa		10.22	□□□□□ -0.77
PKM-223	ENST00000569050	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.22	□□□□□ -0.77
PKM-223	ENST00000569050	LINC00526	Q96FQ7	95 aa		10.22	□□□□□ -0.77
PKM-223	ENST00000569050	PKIG	Q9Y2B9	76 aa		10.22	□□□□□ -0.77
PKM-223	ENST00000569050	SDHAF1	A6NFY7	115 aa		10.21	□□□□□ -0.77
PKM-223	ENST00000569050	MT-ND6	P03923	174 aa		10.21	□□□□□ -0.77
PKM-223	ENST00000569050	S100P	P25815	95 aa		10.21	□□□□□ -0.77
PKM-223	ENST00000569050	CARD19	Q96LW7	228 aa		10.21	□□□□□ -0.77
PKM-223	ENST00000569050	IMMP2L	Q96T52	175 aa		10.21	□□□□□ -0.77
PKM-223	ENST00000569050	ST20	Q9HBF5	79 aa		10.21	□□□□□ -0.77
PKM-223	ENST00000569050		A0A1W2PNN7	141 aa		10.2	□□□□□ -0.78
PKM-223	ENST00000569050		D6R8Y8	96 aa		10.2	□□□□□ -0.78
PKM-223	ENST00000569050	SNAPIN	O95295	136 aa		10.2	□□□□□ -0.78
PKM-223	ENST00000569050	CKS2	P33552	79 aa		10.2	□□□□□ -0.78
PKM-223	ENST00000569050	PTTG1IP	P53801	180 aa		10.2	□□□□□ -0.78
PKM-223	ENST00000569050	COTL1	Q14019	142 aa		10.2	□□□□□ -0.78
PKM-223	ENST00000569050	C1orf137	Q5JT78	98 aa		10.2	□□□□□ -0.78
PKM-223	ENST00000569050	UBE2L6	O14933	153 aa		10.19	□□□□□ -0.78
PKM-223	ENST00000569050	NRAC	Q8N912	160 aa		10.19	□□□□□ -0.78
PKM-223	ENST00000569050	TMEM242	Q9NWH2	141 aa		10.19	□□□□□ -0.78
PKM-223	ENST00000569050	AMT	P48728	403 aa		10.18	□□□□□ -0.78
PKM-223	ENST00000569050	FOXI1	Q12951	378 aa		10.18	□□□□□ -0.78
PKM-223	ENST00000569050	DIRC1	Q969H9	104 aa		10.18	□□□□□ -0.78
PKM-223	ENST00000569050	FSIP2	Q5CZC0	6907 aa		10.17	□□□□□ -0.78
PKM-223	ENST00000569050	TRBV6-5	A0A0K0K1A5	114 aa		10.17	□□□□□ -0.78
PKM-223	ENST00000569050	NPY	P01303	97 aa		10.17	□□□□□ -0.78
PKM-223	ENST00000569050	APCS	P02743	223 aa		10.17	□□□□□ -0.78
PKM-223	ENST00000569050	PMCH	P20382	165 aa		10.17	□□□□□ -0.78
PKM-223	ENST00000569050	IGLV1-50	A0A075B6I6	118 aa		10.16	□□□□□ -0.78
PKM-223	ENST00000569050		I3L3M4	83 aa		10.16	□□□□□ -0.78
PKM-223	ENST00000569050	SUMO2	P61956	95 aa	Known RBP	10.16	□□□□□ -0.78
PKM-223	ENST00000569050	GAGE2B	Q13066	116 aa		10.16	□□□□□ -0.78
PKM-223	ENST00000569050	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.15	□□□□□ -0.78
PKM-223	ENST00000569050	TRAV9-1	A0A075B6T8	112 aa		10.15	□□□□□ -0.78
PKM-223	ENST00000569050	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.15	□□□□□ -0.78
PKM-223	ENST00000569050		H0Y9J4	135 aa		10.15	□□□□□ -0.78
PKM-223	ENST00000569050	TNFRSF6B	O95407	300 aa		10.15	□□□□□ -0.78
PKM-223	ENST00000569050	KRTAP1-4	P0C5Y4	121 aa		10.15	□□□□□ -0.78
PKM-223	ENST00000569050	TMEM136	Q6ZRR5	245 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms