RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CD164L2Q6UWJ8 174 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 ZNF664Q8N3J9 261 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 NUDT10Q8NFP7 164 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 NUDT11Q96G61 164 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
HERPUD1-215ENST00000568676 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.86
HERPUD1-215ENST00000568676 RPL39LQ96EH5 51 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-215ENST00000568676 RPP21Q9H633 154 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-215ENST00000568676 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
HERPUD1-215ENST00000568676 PMCHP20382 165 aa9.7□□□□□ -0.86
HERPUD1-215ENST00000568676 CAMPP49913 170 aa9.7□□□□□ -0.86
HERPUD1-215ENST00000568676 MRAP2Q96G30 205 aa9.7□□□□□ -0.86
HERPUD1-215ENST00000568676 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
HERPUD1-215ENST00000568676 ESDP10768 282 aa9.69□□□□□ -0.86
HERPUD1-215ENST00000568676 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-215ENST00000568676 EIF5A2Q9GZV4 153 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-215ENST00000568676 PSORS1C2Q9UIG4 136 aa9.69□□□□□ -0.86
HERPUD1-215ENST00000568676 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
HERPUD1-215ENST00000568676 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
HERPUD1-215ENST00000568676 MT-ND6P03923 174 aa9.67□□□□□ -0.86
HERPUD1-215ENST00000568676 GAGE2BQ13066 116 aa9.67□□□□□ -0.86
HERPUD1-215ENST00000568676 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
HERPUD1-215ENST00000568676 MALP21145 153 aa9.66□□□□□ -0.86
HERPUD1-215ENST00000568676 SMAGPQ0VAQ4 97 aa9.66□□□□□ -0.86
HERPUD1-215ENST00000568676 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
HERPUD1-215ENST00000568676 ST20Q9HBF5 79 aa9.66□□□□□ -0.86
HERPUD1-215ENST00000568676 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
HERPUD1-215ENST00000568676 APOMO95445 188 aa9.65□□□□□ -0.86
HERPUD1-215ENST00000568676 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
HERPUD1-215ENST00000568676 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
HERPUD1-215ENST00000568676 RNASE7Q9H1E1 156 aaKnown RBP9.65□□□□□ -0.86
HERPUD1-215ENST00000568676 COX7A2LO14548 114 aa9.64□□□□□ -0.87
HERPUD1-215ENST00000568676 TSHBP01222 138 aa9.64□□□□□ -0.87
HERPUD1-215ENST00000568676 CEBPGP53567 150 aa9.64□□□□□ -0.87
HERPUD1-215ENST00000568676 TSKUQ8WUA8 353 aa9.64□□□□□ -0.87
HERPUD1-215ENST00000568676 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
HERPUD1-215ENST00000568676 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
HERPUD1-215ENST00000568676 A0A1W2PNN7 141 aa9.63□□□□□ -0.87
HERPUD1-215ENST00000568676 C7orf77A4D0Y5 90 aa9.63□□□□□ -0.87
HERPUD1-215ENST00000568676 A8MWL6 223 aa9.63□□□□□ -0.87
HERPUD1-215ENST00000568676 OCC1Q8TAD7 63 aa9.63□□□□□ -0.87
HERPUD1-215ENST00000568676 DIRC1Q969H9 104 aa9.63□□□□□ -0.87
HERPUD1-215ENST00000568676 CSDC2Q9Y534 153 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-215ENST00000568676 K7EN84 100 aa9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 RAB14P61106 215 aa9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 SMDT1Q9H4I9 107 aa9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 TMEM242Q9NWH2 141 aa9.62□□□□□ -0.87
HERPUD1-215ENST00000568676 POLR2KP53803 58 aaKnown RBP9.61□□□□□ -0.87
HERPUD1-215ENST00000568676 PEA15Q15121 130 aa9.61□□□□□ -0.87
HERPUD1-215ENST00000568676 RNF151Q2KHN1 245 aa9.61□□□□□ -0.87
HERPUD1-215ENST00000568676 CT83Q5H943 113 aa9.61□□□□□ -0.87
HERPUD1-215ENST00000568676 FAM231DQ6ZW35 169 aa9.61□□□□□ -0.87
HERPUD1-215ENST00000568676 SMIM7Q9BQ49 75 aa9.61□□□□□ -0.87
HERPUD1-215ENST00000568676 ZNF727A8MUV8 499 aa9.6□□□□□ -0.87
HERPUD1-215ENST00000568676 F8WDY8 70 aa9.6□□□□□ -0.87
HERPUD1-215ENST00000568676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-215ENST00000568676 GATCO43716 136 aaKnown RBP9.6□□□□□ -0.87
HERPUD1-215ENST00000568676 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
HERPUD1-215ENST00000568676 RPL18AQ02543 176 aaKnown RBP9.6□□□□□ -0.87
HERPUD1-215ENST00000568676 FAM74A3Q4VXF1 159 aa9.59□□□□□ -0.87
HERPUD1-215ENST00000568676 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
HERPUD1-215ENST00000568676 LPAP08519 4548 aa9.58□□□□□ -0.88
HERPUD1-215ENST00000568676 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
HERPUD1-215ENST00000568676 VCYO14598 125 aa9.58□□□□□ -0.88
HERPUD1-215ENST00000568676 PPP1R17O96001 155 aa9.58□□□□□ -0.88
HERPUD1-215ENST00000568676 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
HERPUD1-215ENST00000568676 OR10D4PQ8NGN7 298 aa9.58□□□□□ -0.88
HERPUD1-215ENST00000568676 A0A1B0GUT8 65 aa9.57□□□□□ -0.88
HERPUD1-215ENST00000568676 FCER1GP30273 86 aa9.57□□□□□ -0.88
HERPUD1-215ENST00000568676 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
HERPUD1-215ENST00000568676 PRR26Q8N8Z3 221 aa9.57□□□□□ -0.88
HERPUD1-215ENST00000568676 IMMP2LQ96T52 175 aa9.57□□□□□ -0.88
HERPUD1-215ENST00000568676 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
HERPUD1-215ENST00000568676 H0Y9J4 135 aa9.56□□□□□ -0.88
HERPUD1-215ENST00000568676 TMEM18Q96B42 140 aa9.56□□□□□ -0.88
HERPUD1-215ENST00000568676 MRPL35Q9NZE8 188 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-215ENST00000568676 UBE2D4Q9Y2X8 147 aa9.56□□□□□ -0.88
HERPUD1-215ENST00000568676 RAB4AP20338 218 aa9.55□□□□□ -0.88
HERPUD1-215ENST00000568676 SPAG11BQ08648 103 aa9.55□□□□□ -0.88
HERPUD1-215ENST00000568676 TMEM241Q24JQ0 296 aa9.55□□□□□ -0.88
HERPUD1-215ENST00000568676 LINC01551Q86U37 167 aa9.55□□□□□ -0.88
HERPUD1-215ENST00000568676 KIR2DL4Q99706 377 aa9.55□□□□□ -0.88
HERPUD1-215ENST00000568676 TIMM21Q9BVV7 248 aa9.55□□□□□ -0.88
HERPUD1-215ENST00000568676 A0A087WZ39 114 aa9.54□□□□□ -0.88
HERPUD1-215ENST00000568676 TRAV13-1A0A0B4J241 112 aa9.54□□□□□ -0.88
HERPUD1-215ENST00000568676 C5orf38Q86SI9 138 aa9.54□□□□□ -0.88
HERPUD1-215ENST00000568676 HIGD1CA8MV81 97 aa9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 PPP1R2P9O14990 202 aa9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 TLX1NBP0CAT3 122 aa9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 RPL13AP40429 203 aaKnown RBP9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 SUMO2P61956 95 aaKnown RBP9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 OPRPNQ99935 248 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 OSTCQ9NRP0 149 aa9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 NAT8Q9UHE5 227 aa9.53□□□□□ -0.88
HERPUD1-215ENST00000568676 TCAPO15273 167 aa9.52□□□□□ -0.89
HERPUD1-215ENST00000568676 SRSF3P84103 164 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms