RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MT-ND4LP03901 98 aa5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 ADCYAP1P18509 176 aa5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 CAMPP49913 170 aa5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 CIRBPQ14011 172 aaKnown RBP5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 SDIM1Q6ZPB5 146 aa5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 ZNF664Q8N3J9 261 aa5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 KIR2DL4Q99706 377 aa5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 CHAC1Q9BUX1 264 aa5.28□□□□□ -1.56
HDGFL3-205ENST00000568129 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 TMEM218A2RU14 115 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 TNFRSF6BO95407 300 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 CKS2P33552 79 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 FOXI1Q12951 378 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 LINC01620Q4KN68 170 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 C10orf91Q5T1B1 145 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 Q5VSD8 79 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 AMMECR1LQ6DCA0 310 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 MRPL54Q6P161 138 aaKnown RBP5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 C15orf56Q8N910 161 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 CHCHD10Q8WYQ3 142 aaPredicted RBP5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 FAM104AQ969W3 186 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 UBE2D4Q9Y2X8 147 aa5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 SRRM2Q9UQ35 2752 aaKnown RBP5.27□□□□□ -1.57
HDGFL3-205ENST00000568129 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 GAGE12HA6NDE8 117 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 D6R8Y8 96 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 NPYP01303 97 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 KRTAP10-4P60372 401 aaPredicted RBP5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 SMAGPQ0VAQ4 97 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 RNASEKQ6P5S7 137 aaKnown RBP5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 CFAP161Q6P656 301 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 SCXQ7RTU7 201 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 ORMDL3Q8N138 153 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 TMEM101Q96IK0 257 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 BTF3L4Q96K17 158 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 SMIM2Q9BVW6 85 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 SEC11CQ9BY50 192 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 LAMTOR2Q9Y2Q5 125 aa5.26□□□□□ -1.57
HDGFL3-205ENST00000568129 TRAV9-1A0A075B6T8 112 aa5.25□□□□□ -1.57
HDGFL3-205ENST00000568129 MRPS36P82909 103 aaKnown RBP5.25□□□□□ -1.57
HDGFL3-205ENST00000568129 CD164L2Q6UWJ8 174 aa5.25□□□□□ -1.57
HDGFL3-205ENST00000568129 TMEM136Q6ZRR5 245 aa5.25□□□□□ -1.57
HDGFL3-205ENST00000568129 CIRBP-AS1Q8TBR5 109 aa5.25□□□□□ -1.57
HDGFL3-205ENST00000568129 CTDSP1Q9GZU7 261 aa5.25□□□□□ -1.57
HDGFL3-205ENST00000568129 hDV102S1A0JD36 115 aa5.24□□□□□ -1.57
HDGFL3-205ENST00000568129 C1orf196B1AJZ1 125 aa5.24□□□□□ -1.57
HDGFL3-205ENST00000568129 FCER1GP30273 86 aa5.24□□□□□ -1.57
HDGFL3-205ENST00000568129 HAMPP81172 84 aa5.24□□□□□ -1.57
HDGFL3-205ENST00000568129 TMEM18Q96B42 140 aa5.24□□□□□ -1.57
HDGFL3-205ENST00000568129 PYGO1Q9Y3Y4 419 aa5.24□□□□□ -1.57
HDGFL3-205ENST00000568129 FLG2Q5D862 2391 aaPredicted RBP5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 K7EMI3 77 aa5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 INAFM2P0DMQ5 153 aa5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 SS18Q15532 418 aa5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 PRELID3AQ96N28 172 aa5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 SPANXA1Q9NS26 97 aa5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 AP5S1Q9NUS5 200 aa5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
HDGFL3-205ENST00000568129 IGHV3-64A0A075B6Q5 118 aa5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 IGHV1-58A0A0C4DH39 117 aa5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 IGKV3OR2-268A0A0C4DH90 116 aa5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 PANO1I0J062 215 aa5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 PLA2G1BP04054 148 aaKnown RBP5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 RPL39P62891 51 aaKnown RBP5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 LINC00528Q8N1L1 170 aa5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 Q8N8P6 123 aa5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 CARHSP1Q9Y2V2 147 aaKnown RBP5.22□□□□□ -1.57
HDGFL3-205ENST00000568129 IGHV3OR16-9A0A0B4J2B5 98 aa5.21□□□□□ -1.58
HDGFL3-205ENST00000568129 NPSP0C0P6 89 aa5.21□□□□□ -1.58
HDGFL3-205ENST00000568129 XCL1P47992 114 aa5.21□□□□□ -1.58
HDGFL3-205ENST00000568129 Q6ZUT4 128 aa5.21□□□□□ -1.58
HDGFL3-205ENST00000568129 SPACA4Q8TDM5 124 aa5.21□□□□□ -1.58
HDGFL3-205ENST00000568129 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
HDGFL3-205ENST00000568129 LINC01546A6NGU7 62 aa5.2□□□□□ -1.58
HDGFL3-205ENST00000568129 COMMD7Q86VX2 200 aa5.2□□□□□ -1.58
HDGFL3-205ENST00000568129 MAP1LC3AQ9H492 121 aa5.2□□□□□ -1.58
HDGFL3-205ENST00000568129 PLAC8Q9NZF1 115 aa5.2□□□□□ -1.58
HDGFL3-205ENST00000568129 IGIPA6NJ69 53 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 F8WDY8 70 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 RAB5AP20339 215 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 RNF151Q2KHN1 245 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 COX19Q49B96 90 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 FAM19A3Q7Z5A8 133 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 PRSS3P2Q8NHM4 247 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 C2orf48Q96LS8 159 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 AMELXQ99217 191 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 OPRPNQ99935 248 aaPredicted RBP5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 GNB1LQ9BYB4 327 aa5.19□□□□□ -1.58
HDGFL3-205ENST00000568129 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 IGLV4-3A0A075B6K6 122 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 A0A087WYN8 130 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 TRAV13-1A0A0B4J241 112 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 COX7A2LO14548 114 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 COX6A2Q02221 97 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 RHEBQ15382 184 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms