RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 SMAGPQ0VAQ4 97 aa12.04□□□□□ -0.48
IFT140-208ENST00000566818 MRPL52Q86TS9 123 aaKnown RBP12.04□□□□□ -0.48
IFT140-208ENST00000566818 SMIM27A0A1W2PRY6 76 aa12.03□□□□□ -0.48
IFT140-208ENST00000566818 SMKR1H3BMG3 65 aa12.03□□□□□ -0.48
IFT140-208ENST00000566818 SRSF3P84103 164 aaKnown RBP12.03□□□□□ -0.48
IFT140-208ENST00000566818 KIR2DL4Q99706 377 aa12.03□□□□□ -0.48
IFT140-208ENST00000566818 XCL1P47992 114 aa12.02□□□□□ -0.49
IFT140-208ENST00000566818 KRTAP10-4P60372 401 aaPredicted RBP12.02□□□□□ -0.49
IFT140-208ENST00000566818 SUMO2P61956 95 aaKnown RBP12.02□□□□□ -0.49
IFT140-208ENST00000566818 FOXI1Q12951 378 aa12.02□□□□□ -0.49
IFT140-208ENST00000566818 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
IFT140-208ENST00000566818 HIGD2BQ4VC39 106 aa12.02□□□□□ -0.49
IFT140-208ENST00000566818 GVQW2A0A096LPI5 108 aaPredicted RBP12.01□□□□□ -0.49
IFT140-208ENST00000566818 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 KRTAP29-1A8MX34 341 aaPredicted RBP12.01□□□□□ -0.49
IFT140-208ENST00000566818 PANO1I0J062 215 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 CCL25O15444 150 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 SLPIP03973 132 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 S100A8P05109 93 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 CAMPP49913 170 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 SS18Q15532 418 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 FAM104BQ5XKR9 115 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 NRACQ8N912 160 aa12.01□□□□□ -0.49
IFT140-208ENST00000566818 DPH3Q96FX2 82 aa12□□□□□ -0.49
IFT140-208ENST00000566818 CDC42SE2Q9NRR3 84 aa12□□□□□ -0.49
IFT140-208ENST00000566818 LINC00862A6NCI5 91 aa11.99□□□□□ -0.49
IFT140-208ENST00000566818 MRPL51Q4U2R6 128 aaKnown RBP11.99□□□□□ -0.49
IFT140-208ENST00000566818 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
IFT140-208ENST00000566818 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
IFT140-208ENST00000566818 PKHD1L1Q86WI1 4243 aa11.99□□□□□ -0.49
IFT140-208ENST00000566818 IGHV1-58A0A0C4DH39 117 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 F8W036 122 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 TCAPO15273 167 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 CKS2P33552 79 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 HBBP68871 147 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 TMEM18Q96B42 140 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 C20orf78Q9BR46 151 aa11.98□□□□□ -0.49
IFT140-208ENST00000566818 CHTF8P0CG12 524 aa11.96□□□□□ -0.49
IFT140-208ENST00000566818 MRPL54Q6P161 138 aaKnown RBP11.96□□□□□ -0.49
IFT140-208ENST00000566818 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
IFT140-208ENST00000566818 CSDC2Q9Y534 153 aaKnown RBP11.96□□□□□ -0.49
IFT140-208ENST00000566818 A0A087WYN8 130 aa11.95□□□□□ -0.5
IFT140-208ENST00000566818 RPL32P62910 135 aaKnown RBP11.95□□□□□ -0.5
IFT140-208ENST00000566818 COX6A2Q02221 97 aa11.95□□□□□ -0.5
IFT140-208ENST00000566818 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
IFT140-208ENST00000566818 TRBV24-1A0A075B6N3 115 aa11.94□□□□□ -0.5
IFT140-208ENST00000566818 C1orf196B1AJZ1 125 aa11.94□□□□□ -0.5
IFT140-208ENST00000566818 OXTP01178 125 aa11.94□□□□□ -0.5
IFT140-208ENST00000566818 A0A1B0GXF2 115 aa11.93□□□□□ -0.5
IFT140-208ENST00000566818 D6R8Y8 96 aa11.93□□□□□ -0.5
IFT140-208ENST00000566818 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
IFT140-208ENST00000566818 SMIM2Q9BVW6 85 aa11.93□□□□□ -0.5
IFT140-208ENST00000566818 PLAC8Q9NZF1 115 aa11.93□□□□□ -0.5
IFT140-208ENST00000566818 ZNF561-AS1K7EIQ3 104 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 PPBPP02775 128 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 MALP21145 153 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 RAB14P61106 215 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 ATP5L2Q7Z4Y8 100 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
IFT140-208ENST00000566818 FAT3Q8TDW7 4589 aa11.91□□□□□ -0.5
IFT140-208ENST00000566818 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
IFT140-208ENST00000566818 COX7A2LO14548 114 aa11.91□□□□□ -0.5
IFT140-208ENST00000566818 PHOX2AO14813 284 aa11.91□□□□□ -0.5
IFT140-208ENST00000566818 PRSS3P2Q8NHM4 247 aa11.91□□□□□ -0.5
IFT140-208ENST00000566818 C7orf33Q8WU49 177 aa11.91□□□□□ -0.5
IFT140-208ENST00000566818 PNRC1Q12796 327 aaPredicted RBP11.9□□□□□ -0.5
IFT140-208ENST00000566818 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
IFT140-208ENST00000566818 Q6ZUT4 128 aa11.9□□□□□ -0.5
IFT140-208ENST00000566818 LINC00474Q9P2X8 69 aa11.9□□□□□ -0.5
IFT140-208ENST00000566818 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
IFT140-208ENST00000566818 LRP1Q07954 4544 aaKnown RBP11.88□□□□□ -0.51
IFT140-208ENST00000566818 NPYP01303 97 aa11.88□□□□□ -0.51
IFT140-208ENST00000566818 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
IFT140-208ENST00000566818 ORMDL3Q8N138 153 aa11.88□□□□□ -0.51
IFT140-208ENST00000566818 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
IFT140-208ENST00000566818 SPANXA1Q9NS26 97 aa11.88□□□□□ -0.51
IFT140-208ENST00000566818 A0A096LNI7 61 aa11.87□□□□□ -0.51
IFT140-208ENST00000566818 HNRNPA3P51991 378 aaKnown RBP11.87□□□□□ -0.51
IFT140-208ENST00000566818 STPG4Q8N801 248 aa11.87□□□□□ -0.51
IFT140-208ENST00000566818 APOMO95445 188 aa11.86□□□□□ -0.51
IFT140-208ENST00000566818 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
IFT140-208ENST00000566818 RPL39P62891 51 aaKnown RBP11.86□□□□□ -0.51
IFT140-208ENST00000566818 ANAPC16Q96DE5 110 aa11.86□□□□□ -0.51
IFT140-208ENST00000566818 RAB5AP20339 215 aa11.85□□□□□ -0.51
IFT140-208ENST00000566818 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
IFT140-208ENST00000566818 PRELID3AQ96N28 172 aa11.85□□□□□ -0.51
IFT140-208ENST00000566818 IGLV4-69A0A075B6H9 119 aa11.84□□□□□ -0.51
IFT140-208ENST00000566818 MRPS36P82909 103 aaKnown RBP11.83□□□□□ -0.52
IFT140-208ENST00000566818 Q6ZRU5 148 aa11.83□□□□□ -0.52
IFT140-208ENST00000566818 C5orf38Q86SI9 138 aa11.83□□□□□ -0.52
IFT140-208ENST00000566818 CAMK2N2Q96S95 79 aa11.83□□□□□ -0.52
IFT140-208ENST00000566818 LAMTOR2Q9Y2Q5 125 aa11.83□□□□□ -0.52
IFT140-208ENST00000566818 LOC107984640A0A0U1RRK4 108 aa11.82□□□□□ -0.52
IFT140-208ENST00000566818 IFITM10A6NMD0 228 aa11.82□□□□□ -0.52
IFT140-208ENST00000566818 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
IFT140-208ENST00000566818 IFI27P40305 119 aaPredicted RBP11.81□□□□□ -0.52
IFT140-208ENST00000566818 SPAG11BQ08648 103 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms