RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 S100A7L2Q5SY68 101 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 NCMAPQ5T1S8 102 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 OR2T2Q6IF00 324 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 C3orf62Q6ZUJ4 267 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 SLC25A26Q70HW3 274 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 LYPD1Q8N2G4 141 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 PLPP5Q8NEB5 264 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 SPTSSAQ969W0 71 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 TTTY12Q9BZ98 90 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 TMEM242Q9NWH2 141 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 CHCHD2Q9Y6H1 151 aaPredicted RBP1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 MUC22E2RYF6 1773 aaPredicted RBP1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 URB1O60287 2271 aaKnown RBP1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 ICE1Q9Y2F5 2266 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 ATMQ13315 3056 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 NUMA1Q14980 2115 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 APC2O95996 2303 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 PLXNB2O15031 1838 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 CITO14578 2027 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 IGKV1D-17A0A075B6S4 117 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 MCRIP1C9JLW8 97 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 APOC4-APOC2K7ER74 178 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 IFNA17P01571 189 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 APOC2P02655 101 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 TFF1P04155 84 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 PIRTP0C851 137 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 IL7P13232 177 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 S100A10P60903 97 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 BTG2P78543 158 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 HSD52Q0P140 79 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 IQCJQ1A5X6 159 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 ASB16-AS1Q495Z4 193 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 C1orf137Q5JT78 98 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 C9orf153Q5TBE3 101 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 SVBPQ8N300 66 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 SERP1Q9Y6X1 66 aa1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 UTP20O75691 2785 aaKnown RBP1.75□□□□□ -2.13
HERPUD1-211ENST00000566550 CENPEQ02224 2701 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 TRAV30A0A087WSZ9 112 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 GEMIN2O14893 280 aaKnown RBP1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 SPINK8P0C7L1 97 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 ADCYAP1P18509 176 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 KRTAP12-2P59991 146 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 PDE6HQ13956 83 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 FP248Q71RG6 208 aaPredicted RBP1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 VSTM2AQ8TAG5 236 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 C10orf105Q8TEF2 133 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 DYNLRB2Q8TF09 96 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 LSM10Q969L4 123 aaKnown RBP1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 TXNDC17Q9BRA2 123 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 HEATR1Q9H583 2144 aaKnown RBP1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 VWFP04275 2813 aa1.74□□□□□ -2.13
HERPUD1-211ENST00000566550 MED12LQ86YW9 2145 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 LAMA1P25391 3075 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 A0A1W2PRS3 328 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 PIPP12273 146 aaPredicted RBP1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 IFITM1P13164 125 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 PKIAP61925 76 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 FAM74A1Q5RGS3 127 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 RPL7L1Q6DKI1 246 aaKnown RBP1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 UNQ5815/PRO19632Q6UWF5 114 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 ZNF833PQ6ZTB9 187 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 ACBD7Q8N6N7 88 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 DEFB124Q8NES8 71 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 IER3IP1Q9Y5U9 82 aa1.73□□□□□ -2.13
HERPUD1-211ENST00000566550 CUBNO60494 3623 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 TGP01266 2768 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 ATG2AQ2TAZ0 1938 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 TANC1Q9C0D5 1861 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 A6NIN4 97 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 OOSP1A8MZH6 123 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 H3BRM9 83 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 NDUFB6O95139 128 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 TNFP01375 233 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 IGKCP01834 107 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 POLR2JP52435 117 aaKnown RBP1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 GNG2P59768 71 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 CNBPP62633 177 aaKnown RBP1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 HCP5Q6MZN7 132 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 C4orf3Q8WVX3 66 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 ORMDL1Q9P0S3 153 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 MGAQ8IWI9 3026 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 ANKRD36CQ5JPF3 1778 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 FREM3P0C091 2139 aa1.72□□□□□ -2.13
HERPUD1-211ENST00000566550 AKAP9Q99996 3911 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 MED13Q9UHV7 2174 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 BAZ2BQ9UIF8 2168 aaKnown RBP1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 APCP25054 2843 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 CCL16O15467 120 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 COX7CP15954 63 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 KRTAP10-1P60331 282 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 RBM3P98179 157 aaKnown RBP1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 Q6ZS92 163 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 COA5Q86WW8 74 aa1.71□□□□□ -2.14
HERPUD1-211ENST00000566550 OR10AG1Q8NH19 301 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms