RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 HAMPP81172 84 aa12.92□□□□□ -0.34
CMTM3-211ENST00000565922 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
CMTM3-211ENST00000565922 AP5S1Q9NUS5 200 aa12.92□□□□□ -0.34
CMTM3-211ENST00000565922 hDV102S1A0JD36 115 aa12.91□□□□□ -0.34
CMTM3-211ENST00000565922 GAGE12HA6NDE8 117 aa12.91□□□□□ -0.34
CMTM3-211ENST00000565922 D6R8Y8 96 aa12.91□□□□□ -0.34
CMTM3-211ENST00000565922 TNFRSF6BO95407 300 aa12.91□□□□□ -0.34
CMTM3-211ENST00000565922 SMR3BP02814 79 aaPredicted RBP12.91□□□□□ -0.34
CMTM3-211ENST00000565922 CHCHD10Q8WYQ3 142 aaPredicted RBP12.91□□□□□ -0.34
CMTM3-211ENST00000565922 IFITM2Q01629 132 aa12.9□□□□□ -0.34
CMTM3-211ENST00000565922 C9orf163Q8N9P6 203 aa12.9□□□□□ -0.34
CMTM3-211ENST00000565922 DNAH8Q96JB1 4490 aa12.89□□□□□ -0.35
CMTM3-211ENST00000565922 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
CMTM3-211ENST00000565922 CNBPP62633 177 aaKnown RBP12.89□□□□□ -0.35
CMTM3-211ENST00000565922 ORMDL3Q8N138 153 aa12.89□□□□□ -0.35
CMTM3-211ENST00000565922 SMIM2Q9BVW6 85 aa12.89□□□□□ -0.35
CMTM3-211ENST00000565922 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
CMTM3-211ENST00000565922 CSDC2Q9Y534 153 aaKnown RBP12.89□□□□□ -0.35
CMTM3-211ENST00000565922 SS18Q15532 418 aa12.88□□□□□ -0.35
CMTM3-211ENST00000565922 ZNF664Q8N3J9 261 aa12.88□□□□□ -0.35
CMTM3-211ENST00000565922 CHAC1Q9BUX1 264 aa12.87□□□□□ -0.35
CMTM3-211ENST00000565922 ABCA13Q86UQ4 5058 aa12.86□□□□□ -0.35
CMTM3-211ENST00000565922 LINC00959A0A1B0GUT2 108 aa12.86□□□□□ -0.35
CMTM3-211ENST00000565922 SCXQ7RTU7 201 aa12.86□□□□□ -0.35
CMTM3-211ENST00000565922 UBE2D4Q9Y2X8 147 aa12.86□□□□□ -0.35
CMTM3-211ENST00000565922 TMEM218A2RU14 115 aa12.85□□□□□ -0.35
CMTM3-211ENST00000565922 CCL25O15444 150 aa12.85□□□□□ -0.35
CMTM3-211ENST00000565922 NPYP01303 97 aa12.85□□□□□ -0.35
CMTM3-211ENST00000565922 TMEM136Q6ZRR5 245 aa12.85□□□□□ -0.35
CMTM3-211ENST00000565922 IMMP2LQ96T52 175 aa12.85□□□□□ -0.35
CMTM3-211ENST00000565922 TIMM21Q9BVV7 248 aa12.85□□□□□ -0.35
CMTM3-211ENST00000565922 LAMTOR2Q9Y2Q5 125 aa12.85□□□□□ -0.35
CMTM3-211ENST00000565922 XCL1P47992 114 aa12.84□□□□□ -0.35
CMTM3-211ENST00000565922 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
CMTM3-211ENST00000565922 PRELID3AQ96N28 172 aa12.84□□□□□ -0.35
CMTM3-211ENST00000565922 CTDSP1Q9GZU7 261 aa12.84□□□□□ -0.35
CMTM3-211ENST00000565922 PLA2G1BP04054 148 aaKnown RBP12.83□□□□□ -0.36
CMTM3-211ENST00000565922 ADCYAP1P18509 176 aa12.83□□□□□ -0.36
CMTM3-211ENST00000565922 FOXI1Q12951 378 aa12.83□□□□□ -0.36
CMTM3-211ENST00000565922 SEC11CQ9BY50 192 aa12.83□□□□□ -0.36
CMTM3-211ENST00000565922 FAT1Q14517 4588 aa12.83□□□□□ -0.36
CMTM3-211ENST00000565922 C1orf196B1AJZ1 125 aa12.82□□□□□ -0.36
CMTM3-211ENST00000565922 INAFM2P0DMQ5 153 aa12.82□□□□□ -0.36
CMTM3-211ENST00000565922 RAB5AP20339 215 aa12.82□□□□□ -0.36
CMTM3-211ENST00000565922 CD164L2Q6UWJ8 174 aa12.82□□□□□ -0.36
CMTM3-211ENST00000565922 IGHV3-64A0A075B6Q5 118 aa12.81□□□□□ -0.36
CMTM3-211ENST00000565922 GVQW2A0A096LPI5 108 aaPredicted RBP12.81□□□□□ -0.36
CMTM3-211ENST00000565922 COMMD7Q86VX2 200 aa12.81□□□□□ -0.36
CMTM3-211ENST00000565922 LINC00528Q8N1L1 170 aa12.81□□□□□ -0.36
CMTM3-211ENST00000565922 CIRBP-AS1Q8TBR5 109 aa12.81□□□□□ -0.36
CMTM3-211ENST00000565922 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
CMTM3-211ENST00000565922 MAP1LC3AQ9H492 121 aa12.8□□□□□ -0.36
CMTM3-211ENST00000565922 SPANXA1Q9NS26 97 aa12.8□□□□□ -0.36
CMTM3-211ENST00000565922 TRAV9-1A0A075B6T8 112 aa12.79□□□□□ -0.36
CMTM3-211ENST00000565922 HIGD2BQ4VC39 106 aa12.79□□□□□ -0.36
CMTM3-211ENST00000565922 PRSS47A8MTI9 375 aa12.78□□□□□ -0.36
CMTM3-211ENST00000565922 SDIM1Q6ZPB5 146 aa12.78□□□□□ -0.36
CMTM3-211ENST00000565922 Q6ZUT4 128 aa12.78□□□□□ -0.36
CMTM3-211ENST00000565922 SLPIP03973 132 aa12.77□□□□□ -0.37
CMTM3-211ENST00000565922 S100PP25815 95 aa12.77□□□□□ -0.37
CMTM3-211ENST00000565922 RPL39P62891 51 aaKnown RBP12.77□□□□□ -0.37
CMTM3-211ENST00000565922 PKIGQ9Y2B9 76 aa12.77□□□□□ -0.37
CMTM3-211ENST00000565922 TRAV13-1A0A0B4J241 112 aa12.76□□□□□ -0.37
CMTM3-211ENST00000565922 MRPS36P82909 103 aaKnown RBP12.76□□□□□ -0.37
CMTM3-211ENST00000565922 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
CMTM3-211ENST00000565922 COX7A2LO14548 114 aa12.75□□□□□ -0.37
CMTM3-211ENST00000565922 MALP21145 153 aa12.75□□□□□ -0.37
CMTM3-211ENST00000565922 IFI27P40305 119 aaPredicted RBP12.75□□□□□ -0.37
CMTM3-211ENST00000565922 LOC389332A0A1B0GUA5 103 aa12.74□□□□□ -0.37
CMTM3-211ENST00000565922 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
CMTM3-211ENST00000565922 K7EMI3 77 aa12.74□□□□□ -0.37
CMTM3-211ENST00000565922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.74□□□□□ -0.37
CMTM3-211ENST00000565922 CIRBPQ14011 172 aaKnown RBP12.73□□□□□ -0.37
CMTM3-211ENST00000565922 Q8N8P6 123 aa12.73□□□□□ -0.37
CMTM3-211ENST00000565922 APOMO95445 188 aa12.72□□□□□ -0.37
CMTM3-211ENST00000565922 RHEBQ15382 184 aa12.72□□□□□ -0.37
CMTM3-211ENST00000565922 ORMDL2Q53FV1 153 aa12.72□□□□□ -0.37
CMTM3-211ENST00000565922 NXT2Q9NPJ8 142 aaKnown RBP12.72□□□□□ -0.37
CMTM3-211ENST00000565922 PYGO1Q9Y3Y4 419 aa12.72□□□□□ -0.37
CMTM3-211ENST00000565922 VPS13BQ7Z7G8 4022 aa12.72□□□□□ -0.37
CMTM3-211ENST00000565922 COX19Q49B96 90 aa12.71□□□□□ -0.37
CMTM3-211ENST00000565922 C10orf91Q5T1B1 145 aa12.71□□□□□ -0.37
CMTM3-211ENST00000565922 DPH3Q96FX2 82 aa12.71□□□□□ -0.37
CMTM3-211ENST00000565922 CARHSP1Q9Y2V2 147 aaKnown RBP12.71□□□□□ -0.37
CMTM3-211ENST00000565922 IFITM10A6NMD0 228 aa12.7□□□□□ -0.38
CMTM3-211ENST00000565922 CARD19Q96LW7 228 aa12.7□□□□□ -0.38
CMTM3-211ENST00000565922 CYSLTR1Q9Y271 337 aa12.7□□□□□ -0.38
CMTM3-211ENST00000565922 G0S2P27469 103 aa12.69□□□□□ -0.38
CMTM3-211ENST00000565922 COX6A2Q02221 97 aa12.69□□□□□ -0.38
CMTM3-211ENST00000565922 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
CMTM3-211ENST00000565922 PANO1I0J062 215 aa12.68□□□□□ -0.38
CMTM3-211ENST00000565922 GNB1LQ9BYB4 327 aa12.68□□□□□ -0.38
CMTM3-211ENST00000565922 SRRM2Q9UQ35 2752 aaKnown RBP12.67□□□□□ -0.38
CMTM3-211ENST00000565922 SYCNQ0VAF6 134 aa12.67□□□□□ -0.38
CMTM3-211ENST00000565922 C2orf66Q6UXQ4 117 aa12.67□□□□□ -0.38
CMTM3-211ENST00000565922 Q6ZN92 141 aa12.67□□□□□ -0.38
CMTM3-211ENST00000565922 C5orf38Q86SI9 138 aa12.67□□□□□ -0.38
CMTM3-211ENST00000565922 FAM104AQ969W3 186 aa12.67□□□□□ -0.38
CMTM3-211ENST00000565922 TMEM141Q96I45 108 aa12.67□□□□□ -0.38
CMTM3-211ENST00000565922 OPRPNQ99935 248 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms