RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 LINC00959A0A1B0GUT2 108 aa12.62□□□□□ -0.39
CLN6-206ENST00000565471 PPP1R17O96001 155 aa12.62□□□□□ -0.39
CLN6-206ENST00000565471 C7orf77A4D0Y5 90 aa12.61□□□□□ -0.39
CLN6-206ENST00000565471 RPL23P62829 140 aaKnown RBP12.61□□□□□ -0.39
CLN6-206ENST00000565471 COX6A2Q02221 97 aa12.61□□□□□ -0.39
CLN6-206ENST00000565471 CDC42SE2Q9NRR3 84 aa12.61□□□□□ -0.39
CLN6-206ENST00000565471 PLAC8Q9NZF1 115 aa12.61□□□□□ -0.39
CLN6-206ENST00000565471 NAT8BQ9UHF3 227 aa12.61□□□□□ -0.39
CLN6-206ENST00000565471 VCYO14598 125 aa12.6□□□□□ -0.39
CLN6-206ENST00000565471 CCL25O15444 150 aa12.6□□□□□ -0.39
CLN6-206ENST00000565471 XCL1P47992 114 aa12.6□□□□□ -0.39
CLN6-206ENST00000565471 SERTAD4-AS1Q5TG53 156 aa12.6□□□□□ -0.39
CLN6-206ENST00000565471 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
CLN6-206ENST00000565471 SS18Q15532 418 aa12.59□□□□□ -0.39
CLN6-206ENST00000565471 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
CLN6-206ENST00000565471 LRP1Q07954 4544 aaKnown RBP12.59□□□□□ -0.39
CLN6-206ENST00000565471 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
CLN6-206ENST00000565471 SMKR1H3BMG3 65 aa12.58□□□□□ -0.4
CLN6-206ENST00000565471 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
CLN6-206ENST00000565471 ZNF664Q8N3J9 261 aa12.58□□□□□ -0.4
CLN6-206ENST00000565471 NRACQ8N912 160 aa12.58□□□□□ -0.4
CLN6-206ENST00000565471 PRSS3P2Q8NHM4 247 aa12.58□□□□□ -0.4
CLN6-206ENST00000565471 C9JQL5 133 aa12.57□□□□□ -0.4
CLN6-206ENST00000565471 FCER1GP30273 86 aa12.57□□□□□ -0.4
CLN6-206ENST00000565471 ADIRFQ15847 76 aa12.57□□□□□ -0.4
CLN6-206ENST00000565471 CD164L2Q6UWJ8 174 aa12.57□□□□□ -0.4
CLN6-206ENST00000565471 CSDC2Q9Y534 153 aaKnown RBP12.57□□□□□ -0.4
CLN6-206ENST00000565471 SMIM27A0A1W2PRY6 76 aa12.56□□□□□ -0.4
CLN6-206ENST00000565471 PPP1R2P9O14990 202 aa12.56□□□□□ -0.4
CLN6-206ENST00000565471 SMAGPQ0VAQ4 97 aa12.56□□□□□ -0.4
CLN6-206ENST00000565471 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
CLN6-206ENST00000565471 Q6ZRU5 148 aa12.56□□□□□ -0.4
CLN6-206ENST00000565471 SMDT1Q9H4I9 107 aa12.56□□□□□ -0.4
CLN6-206ENST00000565471 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
CLN6-206ENST00000565471 PEA15Q15121 130 aa12.55□□□□□ -0.4
CLN6-206ENST00000565471 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
CLN6-206ENST00000565471 C7orf33Q8WU49 177 aa12.55□□□□□ -0.4
CLN6-206ENST00000565471 KIR2DL4Q99706 377 aa12.55□□□□□ -0.4
CLN6-206ENST00000565471 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
CLN6-206ENST00000565471 A0A1B0GW15 77 aa12.54□□□□□ -0.4
CLN6-206ENST00000565471 LINC00862A6NCI5 91 aa12.54□□□□□ -0.4
CLN6-206ENST00000565471 MRPL51Q4U2R6 128 aaKnown RBP12.54□□□□□ -0.4
CLN6-206ENST00000565471 UBE2D4Q9Y2X8 147 aa12.54□□□□□ -0.4
CLN6-206ENST00000565471 LINC00474Q9P2X8 69 aa12.53□□□□□ -0.4
CLN6-206ENST00000565471 FAT3Q8TDW7 4589 aa12.52□□□□□ -0.4
CLN6-206ENST00000565471 A0A096LNI7 61 aa12.52□□□□□ -0.41
CLN6-206ENST00000565471 C1orf196B1AJZ1 125 aa12.52□□□□□ -0.41
CLN6-206ENST00000565471 PHOX2AO14813 284 aa12.52□□□□□ -0.41
CLN6-206ENST00000565471 SRSF3P84103 164 aaKnown RBP12.52□□□□□ -0.41
CLN6-206ENST00000565471 CARD19Q96LW7 228 aa12.52□□□□□ -0.41
CLN6-206ENST00000565471 C20orf78Q9BR46 151 aa12.52□□□□□ -0.41
CLN6-206ENST00000565471 PKHD1L1Q86WI1 4243 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 ZNF561-AS1K7EIQ3 104 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 CAMPP49913 170 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 RPL32P62910 135 aaKnown RBP12.51□□□□□ -0.41
CLN6-206ENST00000565471 STPG4Q8N801 248 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 TMEM18Q96B42 140 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 LINC00526Q96FQ7 95 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 TIMM21Q9BVV7 248 aa12.51□□□□□ -0.41
CLN6-206ENST00000565471 TCAPO15273 167 aa12.5□□□□□ -0.41
CLN6-206ENST00000565471 S100A8P05109 93 aa12.49□□□□□ -0.41
CLN6-206ENST00000565471 CKS2P33552 79 aa12.49□□□□□ -0.41
CLN6-206ENST00000565471 SYCNQ0VAF6 134 aa12.49□□□□□ -0.41
CLN6-206ENST00000565471 COX7A2LO14548 114 aa12.48□□□□□ -0.41
CLN6-206ENST00000565471 F8W036 122 aa12.47□□□□□ -0.41
CLN6-206ENST00000565471 TNFRSF6BO95407 300 aa12.47□□□□□ -0.41
CLN6-206ENST00000565471 MT1HL1P0DM35 61 aa12.47□□□□□ -0.41
CLN6-206ENST00000565471 MALP21145 153 aa12.47□□□□□ -0.41
CLN6-206ENST00000565471 HBBP68871 147 aa12.47□□□□□ -0.41
CLN6-206ENST00000565471 RNASE13Q5GAN3 156 aaKnown RBP12.47□□□□□ -0.41
CLN6-206ENST00000565471 TRAV13-1A0A0B4J241 112 aa12.46□□□□□ -0.41
CLN6-206ENST00000565471 A0A1B0GXF2 115 aa12.46□□□□□ -0.41
CLN6-206ENST00000565471 Q6ZUT4 128 aa12.46□□□□□ -0.41
CLN6-206ENST00000565471 SMIM2Q9BVW6 85 aa12.46□□□□□ -0.41
CLN6-206ENST00000565471 IGLV4-69A0A075B6H9 119 aa12.45□□□□□ -0.42
CLN6-206ENST00000565471 PRR3P79522 188 aaKnown RBP12.45□□□□□ -0.42
CLN6-206ENST00000565471 MRPL54Q6P161 138 aaKnown RBP12.45□□□□□ -0.42
CLN6-206ENST00000565471 D6R8Y8 96 aa12.44□□□□□ -0.42
CLN6-206ENST00000565471 PPBPP02775 128 aa12.44□□□□□ -0.42
CLN6-206ENST00000565471 PLA2G2DQ9UNK4 145 aa12.44□□□□□ -0.42
CLN6-206ENST00000565471 C2orf48Q96LS8 159 aa12.43□□□□□ -0.42
CLN6-206ENST00000565471 SPANXA1Q9NS26 97 aa12.43□□□□□ -0.42
CLN6-206ENST00000565471 LOC107984640A0A0U1RRK4 108 aa12.42□□□□□ -0.42
CLN6-206ENST00000565471 APOMO95445 188 aa12.42□□□□□ -0.42
CLN6-206ENST00000565471 NPYP01303 97 aa12.42□□□□□ -0.42
CLN6-206ENST00000565471 PTTG1IPP53801 180 aa12.42□□□□□ -0.42
CLN6-206ENST00000565471 RPL39P62891 51 aaKnown RBP12.42□□□□□ -0.42
CLN6-206ENST00000565471 ATP5L2Q7Z4Y8 100 aa12.41□□□□□ -0.42
CLN6-206ENST00000565471 C5orf38Q86SI9 138 aa12.41□□□□□ -0.42
CLN6-206ENST00000565471 FAM104AQ969W3 186 aa12.41□□□□□ -0.42
CLN6-206ENST00000565471 CAMK2N2Q96S95 79 aa12.41□□□□□ -0.42
CLN6-206ENST00000565471 MRPS36P82909 103 aaKnown RBP12.4□□□□□ -0.42
CLN6-206ENST00000565471 ORMDL3Q8N138 153 aa12.39□□□□□ -0.43
CLN6-206ENST00000565471 SPAG11BQ08648 103 aa12.38□□□□□ -0.43
CLN6-206ENST00000565471 GAGE2BQ13066 116 aa12.38□□□□□ -0.43
CLN6-206ENST00000565471 OR10D4PQ8NGN7 298 aa12.38□□□□□ -0.43
CLN6-206ENST00000565471 HMCN2Q8NDA2 5059 aa12.37□□□□□ -0.43
CLN6-206ENST00000565471 IGHV3OR16-9A0A0B4J2B5 98 aa12.36□□□□□ -0.43
CLN6-206ENST00000565471 F8WDY8 70 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms