RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 IGKV3OR2-268A0A0C4DH90 116 aa5.39□□□□□ -1.55
CAPN3-213ENST00000565173 A0A1B0GUT8 65 aa5.39□□□□□ -1.55
CAPN3-213ENST00000565173 RIGQ13278 110 aa5.39□□□□□ -1.55
CAPN3-213ENST00000565173 HIGD2BQ4VC39 106 aa5.39□□□□□ -1.55
CAPN3-213ENST00000565173 CFAP161Q6P656 301 aa5.39□□□□□ -1.55
CAPN3-213ENST00000565173 NUP35Q8NFH5 326 aa5.39□□□□□ -1.55
CAPN3-213ENST00000565173 CHCHD10Q8WYQ3 142 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-213ENST00000565173 RPL39LQ96EH5 51 aaKnown RBP5.39□□□□□ -1.55
CAPN3-213ENST00000565173 SEC11CQ9BY50 192 aa5.39□□□□□ -1.55
CAPN3-213ENST00000565173 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-213ENST00000565173 GVQW2A0A096LPI5 108 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-213ENST00000565173 SMIM27A0A1W2PRY6 76 aa5.38□□□□□ -1.55
CAPN3-213ENST00000565173 IGKV2-29A2NJV5 120 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-213ENST00000565173 H7C423 109 aa5.38□□□□□ -1.55
CAPN3-213ENST00000565173 NCR2O95944 276 aa5.38□□□□□ -1.55
CAPN3-213ENST00000565173 FOXI1Q12951 378 aa5.38□□□□□ -1.55
CAPN3-213ENST00000565173 ANAPC16Q96DE5 110 aa5.38□□□□□ -1.55
CAPN3-213ENST00000565173 SDHAF1A6NFY7 115 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 GAS8-AS1O95177 125 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 FGF6P10767 208 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 CAMPP49913 170 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 AMMECR1LQ6DCA0 310 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 MRPL54Q6P161 138 aaKnown RBP5.37□□□□□ -1.55
CAPN3-213ENST00000565173 C7orf33Q8WU49 177 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 LINC01600Q96MT4 127 aa5.37□□□□□ -1.55
CAPN3-213ENST00000565173 CARHSP1Q9Y2V2 147 aaKnown RBP5.37□□□□□ -1.55
CAPN3-213ENST00000565173 A0A096LNI7 61 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 IGKV2-24A0A0C4DH68 120 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 TRBV6-5A0A0K0K1A5 114 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 APOC3P02656 99 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 APCSP02743 223 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 ESDP10768 282 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
CAPN3-213ENST00000565173 ODF1Q14990 250 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 NDUFA5Q16718 116 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 C10orf91Q5T1B1 145 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 RNASEKQ6P5S7 137 aaKnown RBP5.36□□□□□ -1.55
CAPN3-213ENST00000565173 STPG4Q8N801 248 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 OR5A1Q8NGJ0 315 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 LINC00526Q96FQ7 95 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 TMEM191AQ9H0A3 160 aa5.36□□□□□ -1.55
CAPN3-213ENST00000565173 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 I3L3M4 83 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 S100A8P05109 93 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 ZNF25P17030 456 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-213ENST00000565173 XCL1P47992 114 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 KRTAP10-8P60410 259 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 HBBP68871 147 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 AMN1Q8IY45 258 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 SLC7A5P1Q8MH63 180 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 CTDSP1Q9GZU7 261 aa5.35□□□□□ -1.55
CAPN3-213ENST00000565173 A0A1B0GW15 77 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 C7orf77A4D0Y5 90 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 CCL25O15444 150 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 TSHBP01222 138 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 PMCHP20382 165 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 POLR2KP53803 58 aaKnown RBP5.34□□□□□ -1.55
CAPN3-213ENST00000565173 SRSF9Q13242 221 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAPN3-213ENST00000565173 RHEBQ15382 184 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 ATP5L2Q7Z4Y8 100 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 RPS10P5Q9NQ39 176 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 CDC42SE2Q9NRR3 84 aa5.34□□□□□ -1.55
CAPN3-213ENST00000565173 IGHV1-58A0A0C4DH39 117 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 A0A1B0GXF2 115 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 RAB4AP20338 218 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 S100PP25815 95 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
CAPN3-213ENST00000565173 SVBPQ8N300 66 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 MRAP2Q96G30 205 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 BTF3L4Q96K17 158 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 IMMP2LQ96T52 175 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
CAPN3-213ENST00000565173 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 TRBV27A0A0K0K1C4 114 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 SMKR1H3BMG3 65 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 SNAPINO95295 136 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 MRPL51Q4U2R6 128 aaKnown RBP5.32□□□□□ -1.56
CAPN3-213ENST00000565173 FAM104BQ5XKR9 115 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 CD164L2Q6UWJ8 174 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 SPINK6Q6UWN8 80 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 ZNF664Q8N3J9 261 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 TMEM101Q96IK0 257 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 CARD19Q96LW7 228 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 ST20Q9HBF5 79 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 TMEM242Q9NWH2 141 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 LPAP08519 4548 aa5.32□□□□□ -1.56
CAPN3-213ENST00000565173 CKS2P33552 79 aa5.31□□□□□ -1.56
CAPN3-213ENST00000565173 SYCNQ0VAF6 134 aa5.31□□□□□ -1.56
CAPN3-213ENST00000565173 SS18Q15532 418 aa5.31□□□□□ -1.56
CAPN3-213ENST00000565173 TRAV9-1A0A075B6T8 112 aa5.3□□□□□ -1.56
CAPN3-213ENST00000565173 A0A1W2PNN7 141 aa5.3□□□□□ -1.56
CAPN3-213ENST00000565173 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
CAPN3-213ENST00000565173 PPP1R17O96001 155 aa5.3□□□□□ -1.56
CAPN3-213ENST00000565173 PTTG1IPP53801 180 aa5.3□□□□□ -1.56
CAPN3-213ENST00000565173 Q6ZRP5 223 aa5.3□□□□□ -1.56
CAPN3-213ENST00000565173 CSDC2Q9Y534 153 aaKnown RBP5.3□□□□□ -1.56
CAPN3-213ENST00000565173 IGLV4-69A0A075B6H9 119 aa5.29□□□□□ -1.56
CAPN3-213ENST00000565173 D6R8Y8 96 aa5.29□□□□□ -1.56
CAPN3-213ENST00000565173 VCYO14598 125 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms