RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 SMKR1H3BMG3 65 aa6.38□□□□□ -1.39
CMTM3-209ENST00000565003 RPL23P62829 140 aaKnown RBP6.38□□□□□ -1.39
CMTM3-209ENST00000565003 SRSF3P84103 164 aaKnown RBP6.38□□□□□ -1.39
CMTM3-209ENST00000565003 NUP35Q8NFH5 326 aa6.38□□□□□ -1.39
CMTM3-209ENST00000565003 OR5A1Q8NGJ0 315 aa6.38□□□□□ -1.39
CMTM3-209ENST00000565003 MRAP2Q96G30 205 aa6.38□□□□□ -1.39
CMTM3-209ENST00000565003 A0A087WYN8 130 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
CMTM3-209ENST00000565003 TRBV27A0A0K0K1C4 114 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 S100A6P06703 90 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 XCL1P47992 114 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 TMEM241Q24JQ0 296 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 SLC7A5P1Q8MH63 180 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 TMEM101Q96IK0 257 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 BTF3L4Q96K17 158 aa6.37□□□□□ -1.39
CMTM3-209ENST00000565003 C7orf77A4D0Y5 90 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 CCL25O15444 150 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 OXTP01178 125 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 COX6A2Q02221 97 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 RIGQ13278 110 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 ADIRFQ15847 76 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 FAM74A3Q4VXF1 159 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
CMTM3-209ENST00000565003 NRACQ8N912 160 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 CDC42SE2Q9NRR3 84 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 NAT8BQ9UHF3 227 aa6.36□□□□□ -1.39
CMTM3-209ENST00000565003 SMIM27A0A1W2PRY6 76 aa6.35□□□□□ -1.39
CMTM3-209ENST00000565003 SUMO2P61956 95 aaKnown RBP6.35□□□□□ -1.39
CMTM3-209ENST00000565003 PRSS3P2Q8NHM4 247 aa6.35□□□□□ -1.39
CMTM3-209ENST00000565003 DPH3Q96FX2 82 aa6.35□□□□□ -1.39
CMTM3-209ENST00000565003 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
CMTM3-209ENST00000565003 NAT8Q9UHE5 227 aa6.35□□□□□ -1.39
CMTM3-209ENST00000565003 FAT3Q8TDW7 4589 aa6.35□□□□□ -1.39
CMTM3-209ENST00000565003 IGKV2-24A0A0C4DH68 120 aa6.34□□□□□ -1.39
CMTM3-209ENST00000565003 VCYO14598 125 aa6.34□□□□□ -1.39
CMTM3-209ENST00000565003 FCER1GP30273 86 aa6.34□□□□□ -1.39
CMTM3-209ENST00000565003 FAM104BQ5XKR9 115 aa6.34□□□□□ -1.39
CMTM3-209ENST00000565003 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
CMTM3-209ENST00000565003 LINC00526Q96FQ7 95 aa6.34□□□□□ -1.39
CMTM3-209ENST00000565003 A0A096LNI7 61 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 IGHV1-58A0A0C4DH39 117 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 PPP1R17O96001 155 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 CAMPP49913 170 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 PEA15Q15121 130 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 SS18Q15532 418 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 MRPL51Q4U2R6 128 aaKnown RBP6.33□□□□□ -1.4
CMTM3-209ENST00000565003 RNASE13Q5GAN3 156 aaKnown RBP6.33□□□□□ -1.4
CMTM3-209ENST00000565003 CD164L2Q6UWJ8 174 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
CMTM3-209ENST00000565003 PHOX2AO14813 284 aa6.32□□□□□ -1.4
CMTM3-209ENST00000565003 Q6ZUT4 128 aa6.32□□□□□ -1.4
CMTM3-209ENST00000565003 KIR2DL4Q99706 377 aa6.32□□□□□ -1.4
CMTM3-209ENST00000565003 CSDC2Q9Y534 153 aaKnown RBP6.32□□□□□ -1.4
CMTM3-209ENST00000565003 TRBV24-1A0A075B6N3 115 aa6.31□□□□□ -1.4
CMTM3-209ENST00000565003 A0A1B0GW15 77 aa6.31□□□□□ -1.4
CMTM3-209ENST00000565003 PPP1R2P9O14990 202 aa6.31□□□□□ -1.4
CMTM3-209ENST00000565003 MRPL54Q6P161 138 aaKnown RBP6.31□□□□□ -1.4
CMTM3-209ENST00000565003 STPG4Q8N801 248 aa6.31□□□□□ -1.4
CMTM3-209ENST00000565003 CARD19Q96LW7 228 aa6.31□□□□□ -1.4
CMTM3-209ENST00000565003 SMDT1Q9H4I9 107 aa6.31□□□□□ -1.4
CMTM3-209ENST00000565003 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
CMTM3-209ENST00000565003 TRAV13-1A0A0B4J241 112 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 A0A1B0GXF2 115 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 LINC00862A6NCI5 91 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 CKS2P33552 79 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 HBBP68871 147 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 SERTAD4-AS1Q5TG53 156 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 Q6ZRU5 148 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 C20orf78Q9BR46 151 aa6.3□□□□□ -1.4
CMTM3-209ENST00000565003 C1orf196B1AJZ1 125 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 D6R8Y8 96 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 ZNF561-AS1K7EIQ3 104 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
CMTM3-209ENST00000565003 RPL32P62910 135 aaKnown RBP6.29□□□□□ -1.4
CMTM3-209ENST00000565003 PRR3P79522 188 aaKnown RBP6.29□□□□□ -1.4
CMTM3-209ENST00000565003 SYCNQ0VAF6 134 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 C7orf33Q8WU49 177 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 FAM104AQ969W3 186 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 SMIM2Q9BVW6 85 aa6.29□□□□□ -1.4
CMTM3-209ENST00000565003 IGLV4-69A0A075B6H9 119 aa6.28□□□□□ -1.4
CMTM3-209ENST00000565003 COX7A2LO14548 114 aa6.28□□□□□ -1.4
CMTM3-209ENST00000565003 NPYP01303 97 aa6.28□□□□□ -1.4
CMTM3-209ENST00000565003 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
CMTM3-209ENST00000565003 TMEM18Q96B42 140 aa6.28□□□□□ -1.4
CMTM3-209ENST00000565003 F8W036 122 aa6.27□□□□□ -1.41
CMTM3-209ENST00000565003 TCAPO15273 167 aa6.27□□□□□ -1.41
CMTM3-209ENST00000565003 S100A8P05109 93 aa6.27□□□□□ -1.41
CMTM3-209ENST00000565003 MALP21145 153 aa6.27□□□□□ -1.41
CMTM3-209ENST00000565003 C5orf38Q86SI9 138 aa6.27□□□□□ -1.41
CMTM3-209ENST00000565003 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
CMTM3-209ENST00000565003 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
CMTM3-209ENST00000565003 PTTG1IPP53801 180 aa6.26□□□□□ -1.41
CMTM3-209ENST00000565003 OPRPNQ99935 248 aaPredicted RBP6.26□□□□□ -1.41
CMTM3-209ENST00000565003 SPANXA1Q9NS26 97 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms