RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 FAM231DQ6ZW35 169 aa12.53□□□□□ -0.4
COTL1-204ENST00000564662 LINC01600Q96MT4 127 aa12.53□□□□□ -0.4
COTL1-204ENST00000564662 LINC00474Q9P2X8 69 aa12.53□□□□□ -0.4
COTL1-204ENST00000564662 TNXBP22105 4242 aa12.51□□□□□ -0.41
COTL1-204ENST00000564662 SS18Q15532 418 aa12.51□□□□□ -0.41
COTL1-204ENST00000564662 CT83Q5H943 113 aa12.51□□□□□ -0.41
COTL1-204ENST00000564662 ALKAL2Q6UX46 152 aa12.5□□□□□ -0.41
COTL1-204ENST00000564662 hCG_2014768A0A024R1R8 64 aa12.49□□□□□ -0.41
COTL1-204ENST00000564662 C7orf77A4D0Y5 90 aa12.49□□□□□ -0.41
COTL1-204ENST00000564662 ZNF561-AS1K7EIQ3 104 aa12.49□□□□□ -0.41
COTL1-204ENST00000564662 SYCNQ0VAF6 134 aa12.49□□□□□ -0.41
COTL1-204ENST00000564662 MRPL52Q86TS9 123 aaKnown RBP12.49□□□□□ -0.41
COTL1-204ENST00000564662 CDC42SE2Q9NRR3 84 aa12.49□□□□□ -0.41
COTL1-204ENST00000564662 HIGD1CA8MV81 97 aa12.48□□□□□ -0.41
COTL1-204ENST00000564662 CD164L2Q6UWJ8 174 aa12.48□□□□□ -0.41
COTL1-204ENST00000564662 ZNF664Q8N3J9 261 aa12.48□□□□□ -0.41
COTL1-204ENST00000564662 A0A0J9YXV3 536 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 CAMPP49913 170 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 POLR2KP53803 58 aaKnown RBP12.47□□□□□ -0.41
COTL1-204ENST00000564662 BLOC1S1P78537 153 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 REG3GQ6UW15 175 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 SPINK6Q6UWN8 80 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 AMN1Q8IY45 258 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 SMIM7Q9BQ49 75 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 TMEM191AQ9H0A3 160 aa12.47□□□□□ -0.41
COTL1-204ENST00000564662 TRBV27A0A0K0K1C4 114 aa12.46□□□□□ -0.41
COTL1-204ENST00000564662 TSKUQ8WUA8 353 aa12.46□□□□□ -0.41
COTL1-204ENST00000564662 RAB4AP20338 218 aa12.45□□□□□ -0.42
COTL1-204ENST00000564662 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
COTL1-204ENST00000564662 RNASE13Q5GAN3 156 aaKnown RBP12.45□□□□□ -0.42
COTL1-204ENST00000564662 Q6ZRP5 223 aa12.45□□□□□ -0.42
COTL1-204ENST00000564662 FAM210AQ96ND0 272 aa12.45□□□□□ -0.42
COTL1-204ENST00000564662 IGLV4-69A0A075B6H9 119 aa12.44□□□□□ -0.42
COTL1-204ENST00000564662 SMKR1H3BMG3 65 aa12.44□□□□□ -0.42
COTL1-204ENST00000564662 MALP21145 153 aa12.44□□□□□ -0.42
COTL1-204ENST00000564662 FCER1GP30273 86 aa12.44□□□□□ -0.42
COTL1-204ENST00000564662 PTTG1IPP53801 180 aa12.44□□□□□ -0.42
COTL1-204ENST00000564662 LINC01551Q86U37 167 aa12.44□□□□□ -0.42
COTL1-204ENST00000564662 LOC107984640A0A0U1RRK4 108 aa12.43□□□□□ -0.42
COTL1-204ENST00000564662 ISOC2Q96AB3 205 aa12.43□□□□□ -0.42
COTL1-204ENST00000564662 EIF5A2Q9GZV4 153 aaKnown RBP12.43□□□□□ -0.42
COTL1-204ENST00000564662 COX7A2LO14548 114 aa12.42□□□□□ -0.42
COTL1-204ENST00000564662 ZNF727A8MUV8 499 aa12.41□□□□□ -0.42
COTL1-204ENST00000564662 C1orf196B1AJZ1 125 aa12.41□□□□□ -0.42
COTL1-204ENST00000564662 CAMK2N2Q96S95 79 aa12.41□□□□□ -0.42
COTL1-204ENST00000564662 UBE2D4Q9Y2X8 147 aa12.41□□□□□ -0.42
COTL1-204ENST00000564662 SRSF9Q13242 221 aaKnown RBP eCLIP12.4□□□□□ -0.42
COTL1-204ENST00000564662 AKAP14Q86UN6 197 aa12.4□□□□□ -0.42
COTL1-204ENST00000564662 NUP35Q8NFH5 326 aa12.4□□□□□ -0.42
COTL1-204ENST00000564662 OSTCQ9NRP0 149 aa12.4□□□□□ -0.42
COTL1-204ENST00000564662 LRP2P98164 4655 aa12.4□□□□□ -0.43
COTL1-204ENST00000564662 TRAV13-1A0A0B4J241 112 aa12.39□□□□□ -0.43
COTL1-204ENST00000564662 VCYO14598 125 aa12.39□□□□□ -0.43
COTL1-204ENST00000564662 KRTAP10-8P60410 259 aa12.39□□□□□ -0.43
COTL1-204ENST00000564662 SUMO2P61956 95 aaKnown RBP12.39□□□□□ -0.43
COTL1-204ENST00000564662 Q6ZUT4 128 aa12.39□□□□□ -0.43
COTL1-204ENST00000564662 APOMO95445 188 aa12.38□□□□□ -0.43
COTL1-204ENST00000564662 RPL18AQ02543 176 aaKnown RBP12.38□□□□□ -0.43
COTL1-204ENST00000564662 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
COTL1-204ENST00000564662 RIGQ13278 110 aa12.38□□□□□ -0.43
COTL1-204ENST00000564662 NRACQ8N912 160 aa12.38□□□□□ -0.43
COTL1-204ENST00000564662 KIR2DL4Q99706 377 aa12.38□□□□□ -0.43
COTL1-204ENST00000564662 CSDC2Q9Y534 153 aaKnown RBP12.38□□□□□ -0.43
COTL1-204ENST00000564662 V9GYV3 84 aa12.38□□□□□ -0.43
COTL1-204ENST00000564662 A0A1W2PNN7 141 aa12.37□□□□□ -0.43
COTL1-204ENST00000564662 C5orf38Q86SI9 138 aa12.37□□□□□ -0.43
COTL1-204ENST00000564662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.36□□□□□ -0.43
COTL1-204ENST00000564662 PPP1R17O96001 155 aa12.36□□□□□ -0.43
COTL1-204ENST00000564662 RNF213Q63HN8 5207 aa12.35□□□□□ -0.43
COTL1-204ENST00000564662 A0A1B0GVG6 124 aa12.35□□□□□ -0.43
COTL1-204ENST00000564662 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
COTL1-204ENST00000564662 SPAG11BQ08648 103 aa12.35□□□□□ -0.43
COTL1-204ENST00000564662 C9orf116Q5BN46 136 aaPredicted RBP12.35□□□□□ -0.43
COTL1-204ENST00000564662 PPP1R2P9O14990 202 aa12.34□□□□□ -0.43
COTL1-204ENST00000564662 MT-ND6P03923 174 aa12.34□□□□□ -0.43
COTL1-204ENST00000564662 C2orf48Q96LS8 159 aa12.34□□□□□ -0.43
COTL1-204ENST00000564662 OPRPNQ99935 248 aaPredicted RBP12.34□□□□□ -0.43
COTL1-204ENST00000564662 PSORS1C2Q9UIG4 136 aa12.34□□□□□ -0.43
COTL1-204ENST00000564662 MRPL51Q4U2R6 128 aaKnown RBP12.33□□□□□ -0.44
COTL1-204ENST00000564662 TMEM18Q96B42 140 aa12.33□□□□□ -0.44
COTL1-204ENST00000564662 NAT8BQ9UHF3 227 aa12.33□□□□□ -0.44
COTL1-204ENST00000564662 TIMM21Q9BVV7 248 aa12.32□□□□□ -0.44
COTL1-204ENST00000564662 RPL39P62891 51 aaKnown RBP12.31□□□□□ -0.44
COTL1-204ENST00000564662 FAM104BQ5XKR9 115 aa12.31□□□□□ -0.44
COTL1-204ENST00000564662 PHF5AQ7RTV0 110 aaKnown RBP12.31□□□□□ -0.44
COTL1-204ENST00000564662 ADIRFQ15847 76 aa12.3□□□□□ -0.44
COTL1-204ENST00000564662 C1orf137Q5JT78 98 aa12.3□□□□□ -0.44
COTL1-204ENST00000564662 OR10D4PQ8NGN7 298 aa12.3□□□□□ -0.44
COTL1-204ENST00000564662 ORAOV1Q8WV07 137 aa12.3□□□□□ -0.44
COTL1-204ENST00000564662 RPL23P62829 140 aaKnown RBP12.29□□□□□ -0.44
COTL1-204ENST00000564662 TMEM241Q24JQ0 296 aa12.29□□□□□ -0.44
COTL1-204ENST00000564662 FAM74A3Q4VXF1 159 aa12.28□□□□□ -0.44
COTL1-204ENST00000564662 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
COTL1-204ENST00000564662 CKS2P33552 79 aa12.27□□□□□ -0.45
COTL1-204ENST00000564662 RNF151Q2KHN1 245 aa12.27□□□□□ -0.45
COTL1-204ENST00000564662 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
COTL1-204ENST00000564662 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
COTL1-204ENST00000564662 LINC00862A6NCI5 91 aa12.26□□□□□ -0.45
COTL1-204ENST00000564662 TNFRSF6BO95407 300 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms