RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
SF3B3-203ENST00000562874 C9JQL5 133 aa9.99□□□□□ -0.81
SF3B3-203ENST00000562874 CCL25O15444 150 aa9.99□□□□□ -0.81
SF3B3-203ENST00000562874 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
SF3B3-203ENST00000562874 POLR2KP53803 58 aaKnown RBP9.99□□□□□ -0.81
SF3B3-203ENST00000562874 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
SF3B3-203ENST00000562874 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
SF3B3-203ENST00000562874 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-203ENST00000562874 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
SF3B3-203ENST00000562874 C7orf77A4D0Y5 90 aa9.98□□□□□ -0.81
SF3B3-203ENST00000562874 SRSF3P84103 164 aaKnown RBP9.98□□□□□ -0.81
SF3B3-203ENST00000562874 PRSS3P2Q8NHM4 247 aa9.98□□□□□ -0.81
SF3B3-203ENST00000562874 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
SF3B3-203ENST00000562874 OXTP01178 125 aa9.97□□□□□ -0.81
SF3B3-203ENST00000562874 RIGQ13278 110 aa9.97□□□□□ -0.81
SF3B3-203ENST00000562874 TMEM241Q24JQ0 296 aa9.97□□□□□ -0.81
SF3B3-203ENST00000562874 RNASE13Q5GAN3 156 aaKnown RBP9.97□□□□□ -0.81
SF3B3-203ENST00000562874 MAJINQ3KP22 176 aa9.96□□□□□ -0.82
SF3B3-203ENST00000562874 NRACQ8N912 160 aa9.96□□□□□ -0.82
SF3B3-203ENST00000562874 NAT8BQ9UHF3 227 aa9.96□□□□□ -0.82
SF3B3-203ENST00000562874 A0A096LNI7 61 aa9.95□□□□□ -0.82
SF3B3-203ENST00000562874 PHOX2AO14813 284 aa9.95□□□□□ -0.82
SF3B3-203ENST00000562874 FCER1GP30273 86 aa9.95□□□□□ -0.82
SF3B3-203ENST00000562874 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
SF3B3-203ENST00000562874 NAT8Q9UHE5 227 aa9.95□□□□□ -0.82
SF3B3-203ENST00000562874 CAMPP49913 170 aa9.94□□□□□ -0.82
SF3B3-203ENST00000562874 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
SF3B3-203ENST00000562874 MRPL51Q4U2R6 128 aaKnown RBP9.94□□□□□ -0.82
SF3B3-203ENST00000562874 FAM74A3Q4VXF1 159 aa9.94□□□□□ -0.82
SF3B3-203ENST00000562874 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
SF3B3-203ENST00000562874 PLAC8Q9NZF1 115 aa9.94□□□□□ -0.82
SF3B3-203ENST00000562874 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
SF3B3-203ENST00000562874 SS18Q15532 418 aa9.93□□□□□ -0.82
SF3B3-203ENST00000562874 Q6ZUT4 128 aa9.93□□□□□ -0.82
SF3B3-203ENST00000562874 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
SF3B3-203ENST00000562874 FAM104BQ5XKR9 115 aa9.92□□□□□ -0.82
SF3B3-203ENST00000562874 MRPL54Q6P161 138 aaKnown RBP9.92□□□□□ -0.82
SF3B3-203ENST00000562874 STPG4Q8N801 248 aa9.92□□□□□ -0.82
SF3B3-203ENST00000562874 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
SF3B3-203ENST00000562874 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
SF3B3-203ENST00000562874 SMIM27A0A1W2PRY6 76 aa9.91□□□□□ -0.82
SF3B3-203ENST00000562874 VCYO14598 125 aa9.91□□□□□ -0.82
SF3B3-203ENST00000562874 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
SF3B3-203ENST00000562874 PEA15Q15121 130 aa9.9□□□□□ -0.82
SF3B3-203ENST00000562874 C7orf33Q8WU49 177 aa9.9□□□□□ -0.82
SF3B3-203ENST00000562874 KIR2DL4Q99706 377 aa9.9□□□□□ -0.82
SF3B3-203ENST00000562874 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
SF3B3-203ENST00000562874 PPP1R2P9O14990 202 aa9.89□□□□□ -0.83
SF3B3-203ENST00000562874 D6R8Y8 96 aa9.88□□□□□ -0.83
SF3B3-203ENST00000562874 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
SF3B3-203ENST00000562874 PPP1R17O96001 155 aa9.88□□□□□ -0.83
SF3B3-203ENST00000562874 CKS2P33552 79 aa9.88□□□□□ -0.83
SF3B3-203ENST00000562874 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
SF3B3-203ENST00000562874 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
SF3B3-203ENST00000562874 NPYP01303 97 aa9.87□□□□□ -0.83
SF3B3-203ENST00000562874 MT1HL1P0DM35 61 aa9.87□□□□□ -0.83
SF3B3-203ENST00000562874 MALP21145 153 aa9.87□□□□□ -0.83
SF3B3-203ENST00000562874 PRR3P79522 188 aaKnown RBP9.87□□□□□ -0.83
SF3B3-203ENST00000562874 SYCNQ0VAF6 134 aa9.87□□□□□ -0.83
SF3B3-203ENST00000562874 SERTAD4-AS1Q5TG53 156 aa9.87□□□□□ -0.83
SF3B3-203ENST00000562874 COX7A2LO14548 114 aa9.86□□□□□ -0.83
SF3B3-203ENST00000562874 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
SF3B3-203ENST00000562874 HBBP68871 147 aa9.86□□□□□ -0.83
SF3B3-203ENST00000562874 Q6ZRU5 148 aa9.86□□□□□ -0.83
SF3B3-203ENST00000562874 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
SF3B3-203ENST00000562874 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
SF3B3-203ENST00000562874 HMCN2Q8NDA2 5059 aa9.86□□□□□ -0.83
SF3B3-203ENST00000562874 A0A1B0GXF2 115 aa9.85□□□□□ -0.83
SF3B3-203ENST00000562874 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
SF3B3-203ENST00000562874 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
SF3B3-203ENST00000562874 PLA2G2DQ9UNK4 145 aa9.85□□□□□ -0.83
SF3B3-203ENST00000562874 CSDC2Q9Y534 153 aaKnown RBP9.85□□□□□ -0.83
SF3B3-203ENST00000562874 TRBV24-1A0A075B6N3 115 aa9.84□□□□□ -0.83
SF3B3-203ENST00000562874 A0A1B0GW15 77 aa9.84□□□□□ -0.83
SF3B3-203ENST00000562874 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
SF3B3-203ENST00000562874 TCAPO15273 167 aa9.84□□□□□ -0.83
SF3B3-203ENST00000562874 SMAGPQ0VAQ4 97 aa9.84□□□□□ -0.83
SF3B3-203ENST00000562874 GAGE2BQ13066 116 aa9.84□□□□□ -0.83
SF3B3-203ENST00000562874 TMEM18Q96B42 140 aa9.84□□□□□ -0.83
SF3B3-203ENST00000562874 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-203ENST00000562874 FAM104AQ969W3 186 aa9.83□□□□□ -0.84
SF3B3-203ENST00000562874 CAMK2N2Q96S95 79 aa9.83□□□□□ -0.84
SF3B3-203ENST00000562874 TIMM21Q9BVV7 248 aa9.83□□□□□ -0.84
SF3B3-203ENST00000562874 SMDT1Q9H4I9 107 aa9.83□□□□□ -0.84
SF3B3-203ENST00000562874 F8W036 122 aa9.82□□□□□ -0.84
SF3B3-203ENST00000562874 S100A8P05109 93 aa9.82□□□□□ -0.84
SF3B3-203ENST00000562874 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
SF3B3-203ENST00000562874 RPL32P62910 135 aaKnown RBP9.82□□□□□ -0.84
SF3B3-203ENST00000562874 SPAG11BQ08648 103 aa9.82□□□□□ -0.84
SF3B3-203ENST00000562874 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
SF3B3-203ENST00000562874 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
SF3B3-203ENST00000562874 RPL18AQ02543 176 aaKnown RBP9.81□□□□□ -0.84
SF3B3-203ENST00000562874 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
SF3B3-203ENST00000562874 A0A0J9YXV3 536 aa9.8□□□□□ -0.84
SF3B3-203ENST00000562874 TNXBP22105 4242 aa9.8□□□□□ -0.84
SF3B3-203ENST00000562874 IFITM10A6NMD0 228 aa9.79□□□□□ -0.84
SF3B3-203ENST00000562874 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-203ENST00000562874 ODF1Q14990 250 aa9.79□□□□□ -0.84
SF3B3-203ENST00000562874 ORMDL3Q8N138 153 aa9.79□□□□□ -0.84
SF3B3-203ENST00000562874 ORAOV1Q8WV07 137 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms