RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ZNF22P17026 224 aaPredicted RBP3.82□□□□□ -1.8
CAPN3-211ENST00000562199 CRIP1P50238 77 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 PDE6HQ13956 83 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 HCP5Q6MZN7 132 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 DPM3Q9P2X0 92 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 SZT2Q5T011 3432 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 F8WEM9 126 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 MIFP14174 115 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 FXYD7P58549 80 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 PRR4Q16378 134 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 CASC10Q5T4H9 136 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 LYZL1Q6UWQ5 148 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 Q6ZRP5 223 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 ZFAND2AQ8N6M9 145 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 SMCR5Q8TEV8 140 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 PRO1854Q9UHT4 67 aa3.81□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV3-21A0A0B4J1V1 117 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV3-35A0A0C4DH35 117 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 LINC01549A6NIU2 74 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 HCG22E2RYF7 251 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 K7EIM0 57 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 IGKV1-17P01599 117 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 IGLV1-51P01701 117 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV1-8P0DP01 117 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 FCER1GP30273 86 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 Q8N6K4 173 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 RNF5Q99942 180 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 CNFNQ9BYD5 112 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 KAAG1Q9UBP8 84 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 PRR14LQ5THK1 2151 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 NACAE9PAV3 2078 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 CACNA1GO43497 2377 aa3.8□□□□□ -1.8
CAPN3-211ENST00000562199 SPTBN5Q9NRC6 3674 aaKnown RBP3.79□□□□□ -1.8
CAPN3-211ENST00000562199 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 B4DSR2 109 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV3-11P01762 117 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV3-30-3P0DP02 117 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 C9orf116Q5BN46 136 aaPredicted RBP3.79□□□□□ -1.8
CAPN3-211ENST00000562199 C2orf82Q6UX34 121 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 LYPD2Q6UXB3 125 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 Q8N814 137 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 SPTSSBQ8NFR3 76 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 FDCSPQ8NFU4 85 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 UBE2D4Q9Y2X8 147 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 FAM215AQ9Y5M1 114 aa3.79□□□□□ -1.8
CAPN3-211ENST00000562199 XIRP2A4UGR9 3374 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 IGLV2-18A0A075B6J9 118 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV4-4A0A075B6R2 117 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV1-3A0A0C4DH29 117 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 TRBV10-3A0A0K0K1G6 114 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 hDV103S1A0JD37 113 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 M0R3E3 92 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 IGLV1-47P01700 117 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 CMC4P56277 68 aaPredicted RBP3.78□□□□□ -1.8
CAPN3-211ENST00000562199 ATP5EP2Q5VTU8 51 aa3.78□□□□□ -1.8
CAPN3-211ENST00000562199 DNAJC13O75165 2243 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 IGKV2-40A0A087WW87 121 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-211ENST00000562199 NDUFA3O95167 84 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 IGKV2D-40P01614 121 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-211ENST00000562199 APELAP0DMC3 54 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 PLNP26678 52 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 Q5VV11 94 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 PRO3102Q9H379 93 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 C8orf17Q9NRJ1 99 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 PCNX2A6NKB5 2137 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 PLXNB1O43157 2135 aa3.77□□□□□ -1.81
CAPN3-211ENST00000562199 IGLV11-55A0A075B6I3 123 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 TRAV12-1A0A0B4J245 112 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 ERC2-IT1O76042 136 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 SFTA2Q6UW10 78 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 NPBQ8NG41 125 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 CAMK2N2Q96S95 79 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 LINC00467Q9BRT7 94 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 CNTRLQ7Z7A1 2325 aa3.76□□□□□ -1.81
CAPN3-211ENST00000562199 IGHV4-30-2A0A087WSY4 118 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 SDHAF1A6NFY7 115 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
CAPN3-211ENST00000562199 F8VRH5 84 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 IGHV1-69P01742 117 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 PROK1P58294 105 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 MIAQ16674 131 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 DYNAPQ8N1N2 210 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 C20orf203Q8NBC4 194 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 Q8TAT8 98 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 TNCP24821 2201 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 CACNA1DQ01668 2161 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 MED13Q9UHV7 2174 aa3.75□□□□□ -1.81
CAPN3-211ENST00000562199 USP34Q70CQ2 3546 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 IGHV4OR15-8A0A075B7B6 117 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 TRAV40A0A0B4J280 105 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 IGHV7-4-1A0A0J9YVY3 117 aa3.74□□□□□ -1.81
CAPN3-211ENST00000562199 K7EMI3 77 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms