RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
TPM1-230ENST00000561266 MRPL52Q86TS9 123 aaKnown RBP9.06□□□□□ -0.96
TPM1-230ENST00000561266 ORMDL3Q8N138 153 aa9.06□□□□□ -0.96
TPM1-230ENST00000561266 CDC42SE2Q9NRR3 84 aa9.06□□□□□ -0.96
TPM1-230ENST00000561266 PPBPP02775 128 aa9.05□□□□□ -0.96
TPM1-230ENST00000561266 FCER1GP30273 86 aa9.05□□□□□ -0.96
TPM1-230ENST00000561266 KIAA1644Q3SXP7 199 aa9.05□□□□□ -0.96
TPM1-230ENST00000561266 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
TPM1-230ENST00000561266 UBE2D4Q9Y2X8 147 aa9.05□□□□□ -0.96
TPM1-230ENST00000561266 TRAV8-4A0A0B4J246 113 aa9.04□□□□□ -0.96
TPM1-230ENST00000561266 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
TPM1-230ENST00000561266 PHOX2AO14813 284 aa9.04□□□□□ -0.96
TPM1-230ENST00000561266 ZNF25P17030 456 aaPredicted RBP9.04□□□□□ -0.96
TPM1-230ENST00000561266 OR5A1Q8NGJ0 315 aa9.04□□□□□ -0.96
TPM1-230ENST00000561266 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
TPM1-230ENST00000561266 KIR2DL4Q99706 377 aa9.04□□□□□ -0.96
TPM1-230ENST00000561266 LOC389332A0A1B0GUA5 103 aa9.03□□□□□ -0.96
TPM1-230ENST00000561266 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
TPM1-230ENST00000561266 PRSS47A8MTI9 375 aa9.03□□□□□ -0.96
TPM1-230ENST00000561266 SLPIP03973 132 aa9.03□□□□□ -0.96
TPM1-230ENST00000561266 OPRPNQ99935 248 aaPredicted RBP9.03□□□□□ -0.96
TPM1-230ENST00000561266 RPS10P5Q9NQ39 176 aa9.03□□□□□ -0.96
TPM1-230ENST00000561266 FOXI1Q12951 378 aa9.02□□□□□ -0.97
TPM1-230ENST00000561266 Q6ZUT4 128 aa9.02□□□□□ -0.97
TPM1-230ENST00000561266 ZNF664Q8N3J9 261 aa9.02□□□□□ -0.97
TPM1-230ENST00000561266 C15orf56Q8N910 161 aa9.02□□□□□ -0.97
TPM1-230ENST00000561266 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
TPM1-230ENST00000561266 APOC3P02656 99 aa9.01□□□□□ -0.97
TPM1-230ENST00000561266 RHEBQ15382 184 aa9.01□□□□□ -0.97
TPM1-230ENST00000561266 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
TPM1-230ENST00000561266 CCL25O15444 150 aa9□□□□□ -0.97
TPM1-230ENST00000561266 Q6ZSA8 131 aa9□□□□□ -0.97
TPM1-230ENST00000561266 SLC7A5P1Q8MH63 180 aa9□□□□□ -0.97
TPM1-230ENST00000561266 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
TPM1-230ENST00000561266 CSDC2Q9Y534 153 aaKnown RBP9□□□□□ -0.97
TPM1-230ENST00000561266 FAT1Q14517 4588 aa8.99□□□□□ -0.97
TPM1-230ENST00000561266 TGIF2-C20orf24A0A0A6YYL0 155 aa8.99□□□□□ -0.97
TPM1-230ENST00000561266 XCL1P47992 114 aa8.99□□□□□ -0.97
TPM1-230ENST00000561266 Q8N8P6 123 aa8.99□□□□□ -0.97
TPM1-230ENST00000561266 MAP1LC3AQ9H492 121 aa8.99□□□□□ -0.97
TPM1-230ENST00000561266 LAMTOR2Q9Y2Q5 125 aa8.99□□□□□ -0.97
TPM1-230ENST00000561266 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
TPM1-230ENST00000561266 C14orf177Q52M58 125 aa8.98□□□□□ -0.97
TPM1-230ENST00000561266 DGAT2L7PQ6IED9 249 aa8.98□□□□□ -0.97
TPM1-230ENST00000561266 Q8N1X5 172 aa8.98□□□□□ -0.97
TPM1-230ENST00000561266 GNB1LQ9BYB4 327 aa8.98□□□□□ -0.97
TPM1-230ENST00000561266 hDV102S1A0JD36 115 aa8.97□□□□□ -0.97
TPM1-230ENST00000561266 S100PP25815 95 aa8.97□□□□□ -0.97
TPM1-230ENST00000561266 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
TPM1-230ENST00000561266 HIGD2BQ4VC39 106 aa8.97□□□□□ -0.97
TPM1-230ENST00000561266 TRAV13-1A0A0B4J241 112 aa8.96□□□□□ -0.98
TPM1-230ENST00000561266 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.98
TPM1-230ENST00000561266 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
TPM1-230ENST00000561266 YPEL4Q96NS1 127 aa8.96□□□□□ -0.98
TPM1-230ENST00000561266 ALKBH7Q9BT30 221 aaPredicted RBP8.96□□□□□ -0.98
TPM1-230ENST00000561266 PANO1I0J062 215 aa8.95□□□□□ -0.98
TPM1-230ENST00000561266 RAB5AP20339 215 aa8.95□□□□□ -0.98
TPM1-230ENST00000561266 SS18Q15532 418 aa8.95□□□□□ -0.98
TPM1-230ENST00000561266 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
TPM1-230ENST00000561266 TMEM18Q96B42 140 aa8.95□□□□□ -0.98
TPM1-230ENST00000561266 MRPL18Q9H0U6 180 aaKnown RBP8.95□□□□□ -0.98
TPM1-230ENST00000561266 SPANXA1Q9NS26 97 aa8.95□□□□□ -0.98
TPM1-230ENST00000561266 ABCA13Q86UQ4 5058 aa8.95□□□□□ -0.98
TPM1-230ENST00000561266 IGLV4-3A0A075B6K6 122 aa8.94□□□□□ -0.98
TPM1-230ENST00000561266 SNAPINO95295 136 aa8.94□□□□□ -0.98
TPM1-230ENST00000561266 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
TPM1-230ENST00000561266 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
TPM1-230ENST00000561266 CD164L2Q6UWJ8 174 aa8.94□□□□□ -0.98
TPM1-230ENST00000561266 SVBPQ8N300 66 aa8.94□□□□□ -0.98
TPM1-230ENST00000561266 FABP9Q0Z7S8 132 aa8.93□□□□□ -0.98
TPM1-230ENST00000561266 C2orf66Q6UXQ4 117 aa8.93□□□□□ -0.98
TPM1-230ENST00000561266 SDIM1Q6ZPB5 146 aa8.93□□□□□ -0.98
TPM1-230ENST00000561266 SCXQ7RTU7 201 aa8.93□□□□□ -0.98
TPM1-230ENST00000561266 VPS13BQ7Z7G8 4022 aa8.93□□□□□ -0.98
TPM1-230ENST00000561266 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
TPM1-230ENST00000561266 C1orf196B1AJZ1 125 aa8.92□□□□□ -0.98
TPM1-230ENST00000561266 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
TPM1-230ENST00000561266 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
TPM1-230ENST00000561266 NXT2Q9NPJ8 142 aaKnown RBP8.92□□□□□ -0.98
TPM1-230ENST00000561266 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
TPM1-230ENST00000561266 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
TPM1-230ENST00000561266 PCLOQ9Y6V0 5065 aa8.91□□□□□ -0.98
TPM1-230ENST00000561266 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
TPM1-230ENST00000561266 COX6A2Q02221 97 aa8.91□□□□□ -0.98
TPM1-230ENST00000561266 NDUFA5Q16718 116 aa8.91□□□□□ -0.98
TPM1-230ENST00000561266 CIRBP-AS1Q8TBR5 109 aa8.91□□□□□ -0.98
TPM1-230ENST00000561266 URB1-AS1Q96HZ7 61 aa8.91□□□□□ -0.98
TPM1-230ENST00000561266 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
TPM1-230ENST00000561266 SMAGPQ0VAQ4 97 aa8.9□□□□□ -0.98
TPM1-230ENST00000561266 COX19Q49B96 90 aa8.9□□□□□ -0.98
TPM1-230ENST00000561266 CFAP161Q6P656 301 aa8.9□□□□□ -0.98
TPM1-230ENST00000561266 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
TPM1-230ENST00000561266 CHAC1Q9BUX1 264 aa8.9□□□□□ -0.98
TPM1-230ENST00000561266 IGHV1-58A0A0C4DH39 117 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 IFITM10A6NMD0 228 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 MT-ND6P03923 174 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 CHTF8P0CG12 524 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 ORMDL2Q53FV1 153 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 Q5VSD8 79 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 TMEM141Q96I45 108 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms