RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 TAGLN2P37802 199 aaKnown RBP7.31□□□□□ -1.24
USP3-214ENST00000559718 A0A096LNI7 61 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 H7C423 109 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 GATCO43716 136 aaKnown RBP7.3□□□□□ -1.24
USP3-214ENST00000559718 XCL1P47992 114 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 SMIM15Q7Z3B0 74 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 STPG4Q8N801 248 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 LYPD6BQ8NI32 183 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 C7orf33Q8WU49 177 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
USP3-214ENST00000559718 TSHBP01222 138 aa7.29□□□□□ -1.24
USP3-214ENST00000559718 PMCHP20382 165 aa7.29□□□□□ -1.24
USP3-214ENST00000559718 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
USP3-214ENST00000559718 ODF1Q14990 250 aa7.29□□□□□ -1.24
USP3-214ENST00000559718 OR5A1Q8NGJ0 315 aa7.29□□□□□ -1.24
USP3-214ENST00000559718 TMEM242Q9NWH2 141 aa7.29□□□□□ -1.24
USP3-214ENST00000559718 TNXBP22105 4242 aa7.29□□□□□ -1.24
USP3-214ENST00000559718 TRBV6-5A0A0K0K1A5 114 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 LINC00959A0A1B0GUT2 108 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 A8MWL6 223 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 I3L3M4 83 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 CCL25O15444 150 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 ESDP10768 282 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 CEBPGP53567 150 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 TEX261Q6UWH6 196 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 ALKAL2Q6UX46 152 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 FAM231DQ6ZW35 169 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 KRTAP4-2Q9BYR5 136 aa7.28□□□□□ -1.24
USP3-214ENST00000559718 TMEM250H0YL14 139 aa7.27□□□□□ -1.25
USP3-214ENST00000559718 ZNF25P17030 456 aaPredicted RBP7.27□□□□□ -1.25
USP3-214ENST00000559718 BTF3L4Q96K17 158 aa7.27□□□□□ -1.25
USP3-214ENST00000559718 IGHV1-58A0A0C4DH39 117 aa7.26□□□□□ -1.25
USP3-214ENST00000559718 LINC00310P59036 64 aa7.26□□□□□ -1.25
USP3-214ENST00000559718 TMEM101Q96IK0 257 aa7.26□□□□□ -1.25
USP3-214ENST00000559718 ST20Q9HBF5 79 aa7.26□□□□□ -1.25
USP3-214ENST00000559718 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 RAB4AP20338 218 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 POLR2KP53803 58 aaKnown RBP7.25□□□□□ -1.25
USP3-214ENST00000559718 BLOC1S1P78537 153 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 CT83Q5H943 113 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 AMN1Q8IY45 258 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 MRAP2Q96G30 205 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 CDC42SE2Q9NRR3 84 aa7.25□□□□□ -1.25
USP3-214ENST00000559718 LRP2P98164 4655 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 SMKR1H3BMG3 65 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 SS18Q15532 418 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 MRPL52Q86TS9 123 aaKnown RBP7.24□□□□□ -1.25
USP3-214ENST00000559718 LINC01551Q86U37 167 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 TSKUQ8WUA8 353 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 BORCS7Q96B45 105 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 TMEM191AQ9H0A3 160 aa7.24□□□□□ -1.25
USP3-214ENST00000559718 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
USP3-214ENST00000559718 C7orf77A4D0Y5 90 aa7.23□□□□□ -1.25
USP3-214ENST00000559718 SYCNQ0VAF6 134 aa7.23□□□□□ -1.25
USP3-214ENST00000559718 RNASE13Q5GAN3 156 aaKnown RBP7.23□□□□□ -1.25
USP3-214ENST00000559718 CD164L2Q6UWJ8 174 aa7.23□□□□□ -1.25
USP3-214ENST00000559718 ZNF664Q8N3J9 261 aa7.23□□□□□ -1.25
USP3-214ENST00000559718 SMIM7Q9BQ49 75 aa7.23□□□□□ -1.25
USP3-214ENST00000559718 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
USP3-214ENST00000559718 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
USP3-214ENST00000559718 LINC00474Q9P2X8 69 aa7.22□□□□□ -1.25
USP3-214ENST00000559718 hCG_2014768A0A024R1R8 64 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 IGLV4-69A0A075B6H9 119 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 A0A0J9YXV3 536 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 ZNF727A8MUV8 499 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 CAMPP49913 170 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 PTTG1IPP53801 180 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 GAGE2BQ13066 116 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 AKAP14Q86UN6 197 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 NRACQ8N912 160 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 OSTCQ9NRP0 149 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 V9GYV3 84 aa7.21□□□□□ -1.26
USP3-214ENST00000559718 VCYO14598 125 aa7.2□□□□□ -1.26
USP3-214ENST00000559718 SRP19P09132 144 aaKnown RBP7.2□□□□□ -1.26
USP3-214ENST00000559718 FCER1GP30273 86 aa7.2□□□□□ -1.26
USP3-214ENST00000559718 SRSF9Q13242 221 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP3-214ENST00000559718 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
USP3-214ENST00000559718 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
USP3-214ENST00000559718 UBE2D4Q9Y2X8 147 aa7.2□□□□□ -1.26
USP3-214ENST00000559718 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 C1orf196B1AJZ1 125 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 COX7A2LO14548 114 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 MALP21145 153 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 SUMO2P61956 95 aaKnown RBP7.19□□□□□ -1.26
USP3-214ENST00000559718 RIGQ13278 110 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 Q6ZRP5 223 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 Q6ZUT4 128 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 C5orf38Q86SI9 138 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 FAM210AQ96ND0 272 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
USP3-214ENST00000559718 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
USP3-214ENST00000559718 KRTAP4-11Q9BYQ6 195 aa7.18□□□□□ -1.26
USP3-214ENST00000559718 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
USP3-214ENST00000559718 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.17□□□□□ -1.26
USP3-214ENST00000559718 REG3GQ6UW15 175 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms