RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FAM104AQ969W3 186 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 MIEN1Q9BRT3 115 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 CST9LQ9H4G1 147 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
TPM1-219ENST00000559397 IGLL5B9A064 214 aa11.48□□□□□ -0.57
TPM1-219ENST00000559397 H3BNG1 76 aa11.48□□□□□ -0.57
TPM1-219ENST00000559397 PLNP26678 52 aa11.48□□□□□ -0.57
TPM1-219ENST00000559397 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
TPM1-219ENST00000559397 UBE2D4Q9Y2X8 147 aa11.48□□□□□ -0.57
TPM1-219ENST00000559397 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
TPM1-219ENST00000559397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
TPM1-219ENST00000559397 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
TPM1-219ENST00000559397 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
TPM1-219ENST00000559397 ANKRD39Q53RE8 183 aa11.46□□□□□ -0.57
TPM1-219ENST00000559397 ZC2HC1BQ5TFG8 222 aa11.46□□□□□ -0.57
TPM1-219ENST00000559397 STPG4Q8N801 248 aa11.46□□□□□ -0.57
TPM1-219ENST00000559397 KLK5Q9Y337 293 aaPredicted RBP11.46□□□□□ -0.57
TPM1-219ENST00000559397 GYPEP15421 78 aa11.46□□□□□ -0.58
TPM1-219ENST00000559397 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.58
TPM1-219ENST00000559397 AMELXQ99217 191 aa11.46□□□□□ -0.58
TPM1-219ENST00000559397 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.58
TPM1-219ENST00000559397 C3orf84H3BNL1 204 aa11.45□□□□□ -0.58
TPM1-219ENST00000559397 C14orf144Q96I85 54 aa11.45□□□□□ -0.58
TPM1-219ENST00000559397 ALMS1Q8TCU4 4167 aa11.44□□□□□ -0.58
TPM1-219ENST00000559397 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
TPM1-219ENST00000559397 A0A096LPF7 62 aa11.44□□□□□ -0.58
TPM1-219ENST00000559397 MRPS36P82909 103 aaKnown RBP11.44□□□□□ -0.58
TPM1-219ENST00000559397 TMEM97Q5BJF2 176 aa11.44□□□□□ -0.58
TPM1-219ENST00000559397 MRPL52Q86TS9 123 aaKnown RBP11.44□□□□□ -0.58
TPM1-219ENST00000559397 APLNQ9ULZ1 77 aa11.44□□□□□ -0.58
TPM1-219ENST00000559397 CASC10Q5T4H9 136 aa11.43□□□□□ -0.58
TPM1-219ENST00000559397 C15orf53Q8NAA6 179 aa11.43□□□□□ -0.58
TPM1-219ENST00000559397 TMEM243Q9BU79 118 aa11.43□□□□□ -0.58
TPM1-219ENST00000559397 VCX2Q9H322 139 aa11.43□□□□□ -0.58
TPM1-219ENST00000559397 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
TPM1-219ENST00000559397 ATP6V0E2Q8NHE4 81 aa11.43□□□□□ -0.58
TPM1-219ENST00000559397 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
TPM1-219ENST00000559397 TRBV25-1A0A075B6N4 114 aa11.42□□□□□ -0.58
TPM1-219ENST00000559397 TRBV6-8A0A0A6YYG3 113 aa11.42□□□□□ -0.58
TPM1-219ENST00000559397 H7C423 109 aa11.42□□□□□ -0.58
TPM1-219ENST00000559397 TCTAP57738 103 aa11.42□□□□□ -0.58
TPM1-219ENST00000559397 MRPL23Q16540 153 aaKnown RBP11.42□□□□□ -0.58
TPM1-219ENST00000559397 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
TPM1-219ENST00000559397 COX8AP10176 69 aa11.41□□□□□ -0.58
TPM1-219ENST00000559397 FGF6P10767 208 aa11.41□□□□□ -0.58
TPM1-219ENST00000559397 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
TPM1-219ENST00000559397 TENM2Q9NT68 2774 aa11.41□□□□□ -0.58
TPM1-219ENST00000559397 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
TPM1-219ENST00000559397 Q6ZUT4 128 aa11.4□□□□□ -0.58
TPM1-219ENST00000559397 SLC25A34Q6PIV7 304 aa11.4□□□□□ -0.59
TPM1-219ENST00000559397 SACSQ9NZJ4 4579 aa11.39□□□□□ -0.59
TPM1-219ENST00000559397 DNAH6Q9C0G6 4158 aa11.39□□□□□ -0.59
TPM1-219ENST00000559397 IGKV2D-26A0A0A0MRZ7 120 aa11.38□□□□□ -0.59
TPM1-219ENST00000559397 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
TPM1-219ENST00000559397 DLEU1O43261 78 aa11.37□□□□□ -0.59
TPM1-219ENST00000559397 SH2D6Q7Z4S9 175 aa11.37□□□□□ -0.59
TPM1-219ENST00000559397 BOD1L2Q8IYS8 172 aa11.37□□□□□ -0.59
TPM1-219ENST00000559397 UBE2L6O14933 153 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 ZNF25P17030 456 aaPredicted RBP11.36□□□□□ -0.59
TPM1-219ENST00000559397 RNASE13Q5GAN3 156 aaKnown RBP11.36□□□□□ -0.59
TPM1-219ENST00000559397 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 A0A0J9YXV3 536 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 HNRNPA3P51991 378 aaKnown RBP11.36□□□□□ -0.59
TPM1-219ENST00000559397 ESRGQ1W209 222 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 LYPD5Q6UWN5 251 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 C2orf88Q9BSF0 95 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 TP73-AS1Q9UF72 201 aa11.36□□□□□ -0.59
TPM1-219ENST00000559397 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
TPM1-219ENST00000559397 E9PLD3 99 aa11.35□□□□□ -0.59
TPM1-219ENST00000559397 NMUP48645 174 aa11.35□□□□□ -0.59
TPM1-219ENST00000559397 UBE2D1P51668 147 aa11.35□□□□□ -0.59
TPM1-219ENST00000559397 PCP2Q8IVA1 136 aa11.35□□□□□ -0.59
TPM1-219ENST00000559397 GAGE6Q13070 117 aa11.34□□□□□ -0.59
TPM1-219ENST00000559397 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
TPM1-219ENST00000559397 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
TPM1-219ENST00000559397 KMT2AQ03164 3969 aa11.34□□□□□ -0.59
TPM1-219ENST00000559397 TINCRA0A1B0GVN0 87 aa11.33□□□□□ -0.6
TPM1-219ENST00000559397 ZNF22P17026 224 aaPredicted RBP11.33□□□□□ -0.6
TPM1-219ENST00000559397 TIRAPP58753 221 aa11.33□□□□□ -0.6
TPM1-219ENST00000559397 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
TPM1-219ENST00000559397 TMEM101Q96IK0 257 aa11.33□□□□□ -0.6
TPM1-219ENST00000559397 CTAG1AP78358 180 aa11.33□□□□□ -0.6
TPM1-219ENST00000559397 HERVK_113P61574 105 aa11.32□□□□□ -0.6
TPM1-219ENST00000559397 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
TPM1-219ENST00000559397 C2orf91Q6ZV80 131 aa11.32□□□□□ -0.6
TPM1-219ENST00000559397 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
TPM1-219ENST00000559397 CCL18P55774 89 aa11.31□□□□□ -0.6
TPM1-219ENST00000559397 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 SIVA1O15304 175 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 HYDINQ4G0P3 5121 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 IGLV4-60A0A075B6I1 120 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 IGLV5-45A0A087WSX0 123 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 LELP1Q5T871 98 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
TPM1-219ENST00000559397 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
TPM1-219ENST00000559397 SNHG12Q9BXW3 62 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms