RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 C7orf77A4D0Y5 90 aa10.84□□□□□ -0.67
LRRC28-210ENST00000558879 SMKR1H3BMG3 65 aa10.84□□□□□ -0.67
LRRC28-210ENST00000558879 J3QL48 77 aa10.84□□□□□ -0.67
LRRC28-210ENST00000558879 CFAP161Q6P656 301 aa10.84□□□□□ -0.67
LRRC28-210ENST00000558879 SPACA4Q8TDM5 124 aa10.84□□□□□ -0.67
LRRC28-210ENST00000558879 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
LRRC28-210ENST00000558879 LRP1Q07954 4544 aaKnown RBP10.84□□□□□ -0.67
LRRC28-210ENST00000558879 LINC00959A0A1B0GUT2 108 aa10.83□□□□□ -0.68
LRRC28-210ENST00000558879 TMEM101Q96IK0 257 aa10.83□□□□□ -0.68
LRRC28-210ENST00000558879 PPP1R17O96001 155 aa10.82□□□□□ -0.68
LRRC28-210ENST00000558879 CHTF8P0CG12 524 aa10.82□□□□□ -0.68
LRRC28-210ENST00000558879 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
LRRC28-210ENST00000558879 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
LRRC28-210ENST00000558879 PEA15Q15121 130 aa10.82□□□□□ -0.68
LRRC28-210ENST00000558879 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
LRRC28-210ENST00000558879 FAM104BQ5XKR9 115 aa10.82□□□□□ -0.68
LRRC28-210ENST00000558879 CDC42SE2Q9NRR3 84 aa10.82□□□□□ -0.68
LRRC28-210ENST00000558879 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
LRRC28-210ENST00000558879 CCL25O15444 150 aa10.81□□□□□ -0.68
LRRC28-210ENST00000558879 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
LRRC28-210ENST00000558879 A0A087WYN8 130 aa10.8□□□□□ -0.68
LRRC28-210ENST00000558879 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
LRRC28-210ENST00000558879 A0A1B0GW15 77 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 VCYO14598 125 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 PPP1R2P9O14990 202 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 OXTP01178 125 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 XCL1P47992 114 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 ZNF664Q8N3J9 261 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 PLAC8Q9NZF1 115 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
LRRC28-210ENST00000558879 TRBV24-1A0A075B6N3 115 aa10.78□□□□□ -0.68
LRRC28-210ENST00000558879 A0A1B0GXF2 115 aa10.78□□□□□ -0.68
LRRC28-210ENST00000558879 LINC00862A6NCI5 91 aa10.78□□□□□ -0.68
LRRC28-210ENST00000558879 RPL32P62910 135 aaKnown RBP10.78□□□□□ -0.68
LRRC28-210ENST00000558879 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.69
LRRC28-210ENST00000558879 FCER1GP30273 86 aa10.77□□□□□ -0.69
LRRC28-210ENST00000558879 CAMPP49913 170 aa10.77□□□□□ -0.69
LRRC28-210ENST00000558879 COX6A2Q02221 97 aa10.77□□□□□ -0.69
LRRC28-210ENST00000558879 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
LRRC28-210ENST00000558879 KIR2DL4Q99706 377 aa10.77□□□□□ -0.69
LRRC28-210ENST00000558879 C20orf78Q9BR46 151 aa10.77□□□□□ -0.69
LRRC28-210ENST00000558879 HBBP68871 147 aa10.76□□□□□ -0.69
LRRC28-210ENST00000558879 SS18Q15532 418 aa10.76□□□□□ -0.69
LRRC28-210ENST00000558879 PRSS3P2Q8NHM4 247 aa10.76□□□□□ -0.69
LRRC28-210ENST00000558879 TIMM21Q9BVV7 248 aa10.75□□□□□ -0.69
LRRC28-210ENST00000558879 S100A8P05109 93 aa10.74□□□□□ -0.69
LRRC28-210ENST00000558879 SMAGPQ0VAQ4 97 aa10.74□□□□□ -0.69
LRRC28-210ENST00000558879 MRPL54Q6P161 138 aaKnown RBP10.74□□□□□ -0.69
LRRC28-210ENST00000558879 Q6ZUT4 128 aa10.74□□□□□ -0.69
LRRC28-210ENST00000558879 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
LRRC28-210ENST00000558879 A0A096LNI7 61 aa10.73□□□□□ -0.69
LRRC28-210ENST00000558879 TNFRSF6BO95407 300 aa10.73□□□□□ -0.69
LRRC28-210ENST00000558879 CKS2P33552 79 aa10.73□□□□□ -0.69
LRRC28-210ENST00000558879 CARD19Q96LW7 228 aa10.73□□□□□ -0.69
LRRC28-210ENST00000558879 C1orf196B1AJZ1 125 aa10.72□□□□□ -0.69
LRRC28-210ENST00000558879 D6R8Y8 96 aa10.72□□□□□ -0.69
LRRC28-210ENST00000558879 F8W036 122 aa10.72□□□□□ -0.69
LRRC28-210ENST00000558879 PHOX2AO14813 284 aa10.72□□□□□ -0.69
LRRC28-210ENST00000558879 TCAPO15273 167 aa10.72□□□□□ -0.69
LRRC28-210ENST00000558879 RNASE13Q5GAN3 156 aaKnown RBP10.72□□□□□ -0.69
LRRC28-210ENST00000558879 LINC00526Q96FQ7 95 aa10.72□□□□□ -0.69
LRRC28-210ENST00000558879 IGKV2-24A0A0C4DH68 120 aa10.71□□□□□ -0.69
LRRC28-210ENST00000558879 NPYP01303 97 aa10.71□□□□□ -0.69
LRRC28-210ENST00000558879 MAJINQ3KP22 176 aa10.71□□□□□ -0.69
LRRC28-210ENST00000558879 ATP5L2Q7Z4Y8 100 aa10.71□□□□□ -0.69
LRRC28-210ENST00000558879 FAM104AQ969W3 186 aa10.71□□□□□ -0.69
LRRC28-210ENST00000558879 TMEM18Q96B42 140 aa10.71□□□□□ -0.69
LRRC28-210ENST00000558879 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
LRRC28-210ENST00000558879 PKIGQ9Y2B9 76 aa10.7□□□□□ -0.7
LRRC28-210ENST00000558879 PPBPP02775 128 aa10.69□□□□□ -0.7
LRRC28-210ENST00000558879 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
LRRC28-210ENST00000558879 Q6ZRU5 148 aa10.69□□□□□ -0.7
LRRC28-210ENST00000558879 STPG4Q8N801 248 aa10.69□□□□□ -0.7
LRRC28-210ENST00000558879 DPH3Q96FX2 82 aa10.69□□□□□ -0.7
LRRC28-210ENST00000558879 ZNF561-AS1K7EIQ3 104 aa10.68□□□□□ -0.7
LRRC28-210ENST00000558879 COX7A2LO14548 114 aa10.68□□□□□ -0.7
LRRC28-210ENST00000558879 RAB14P61106 215 aa10.68□□□□□ -0.7
LRRC28-210ENST00000558879 PNRC1Q12796 327 aaPredicted RBP10.68□□□□□ -0.7
LRRC28-210ENST00000558879 SPANXA1Q9NS26 97 aa10.68□□□□□ -0.7
LRRC28-210ENST00000558879 IGLV4-69A0A075B6H9 119 aa10.67□□□□□ -0.7
LRRC28-210ENST00000558879 TRAV13-1A0A0B4J241 112 aa10.67□□□□□ -0.7
LRRC28-210ENST00000558879 ORMDL3Q8N138 153 aa10.67□□□□□ -0.7
LRRC28-210ENST00000558879 C7orf33Q8WU49 177 aa10.67□□□□□ -0.7
LRRC28-210ENST00000558879 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
LRRC28-210ENST00000558879 MT1HL1P0DM35 61 aa10.66□□□□□ -0.7
LRRC28-210ENST00000558879 MALP21145 153 aa10.66□□□□□ -0.7
LRRC28-210ENST00000558879 MRPS36P82909 103 aaKnown RBP10.66□□□□□ -0.7
LRRC28-210ENST00000558879 PRR3P79522 188 aaKnown RBP10.65□□□□□ -0.7
LRRC28-210ENST00000558879 SERTAD4-AS1Q5TG53 156 aa10.65□□□□□ -0.7
LRRC28-210ENST00000558879 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
LRRC28-210ENST00000558879 C5orf38Q86SI9 138 aa10.64□□□□□ -0.71
LRRC28-210ENST00000558879 ANAPC16Q96DE5 110 aa10.64□□□□□ -0.71
LRRC28-210ENST00000558879 C2orf48Q96LS8 159 aa10.64□□□□□ -0.71
LRRC28-210ENST00000558879 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
LRRC28-210ENST00000558879 LOC107984640A0A0U1RRK4 108 aa10.63□□□□□ -0.71
LRRC28-210ENST00000558879 PRSS47A8MTI9 375 aa10.63□□□□□ -0.71
LRRC28-210ENST00000558879 TMEM136Q6ZRR5 245 aa10.63□□□□□ -0.71
LRRC28-210ENST00000558879 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-210ENST00000558879 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
LRRC28-210ENST00000558879 IGHV3OR16-9A0A0B4J2B5 98 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms