RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CACNA1BQ00975 2339 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 IBA57-AS1B1ANH7 110 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 PAX4O43316 350 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 TSHBP01222 138 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 INSP01308 110 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 TRBV12-3P01733 135 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV4-38-2P0DP08 117 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 CD28P10747 220 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 XCL1P47992 114 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 FP248Q71RG6 208 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-207ENST00000558335 AMELXQ99217 191 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 TM2D3Q9BRN9 247 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 TTTY13Q9BZ97 58 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 XCL2Q9UBD3 114 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 FRYQ5TBA9 3013 aa4.03□□□□□ -1.76
GABPB1-207ENST00000558335 AGRNO00468 2067 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 DSPP15924 2871 aaKnown RBP4.02□□□□□ -1.77
GABPB1-207ENST00000558335 TPRP12270 2363 aaKnown RBP4.02□□□□□ -1.77
GABPB1-207ENST00000558335 IGKV3-7A0A075B6H7 116 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 A0A087WWL8 130 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 TRAV13-2A0A0B4J235 113 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 A0A1W2PPR1 153 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 F6UB75 175 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 ZNF22P17026 224 aaPredicted RBP4.02□□□□□ -1.77
GABPB1-207ENST00000558335 GNLYP22749 145 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 BLCAPP62952 87 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 RBM3P98179 157 aaKnown RBP4.02□□□□□ -1.77
GABPB1-207ENST00000558335 Q6YL49 198 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
GABPB1-207ENST00000558335 PTPRQQ9UMZ3 2332 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 ARHGAP32A7KAX9 2087 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 IGLV4-3A0A075B6K6 122 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 IGHV3OR16-10A0A075B7F0 116 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 IGHV4-30-2A0A087WSY4 118 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 ERC2-IT1O76042 136 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 IGHV3-53P01767 116 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 RPL39P62891 51 aaKnown RBP4.01□□□□□ -1.77
GABPB1-207ENST00000558335 MIAQ16674 131 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 SERTAD4-AS1Q5TG53 156 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 Q8N2B8 174 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 KLHL30-AS1Q8NEE0 82 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 C4orf3Q8WVX3 66 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 NDUFA12Q9UI09 145 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 ICOSQ9Y6W8 199 aa4.01□□□□□ -1.77
GABPB1-207ENST00000558335 PTPRZ1P23471 2315 aaPredicted RBP4.01□□□□□ -1.77
GABPB1-207ENST00000558335 H7BZZ5 65 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 NDUFA1O15239 70 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 PRSS2P07478 247 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 IGHV3-30-3P0DP02 117 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 PRB4P10163 310 aaPredicted RBP4□□□□□ -1.77
GABPB1-207ENST00000558335 RPL36AP83881 106 aaKnown RBP4□□□□□ -1.77
GABPB1-207ENST00000558335 FHL2Q14192 279 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 SPINK13Q1W4C9 94 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 DEFB112Q30KQ8 113 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 MUSTN1Q8IVN3 82 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 RPL36ALQ969Q0 106 aaKnown RBP4□□□□□ -1.77
GABPB1-207ENST00000558335 UBE2D4Q9Y2X8 147 aa4□□□□□ -1.77
GABPB1-207ENST00000558335 DMDP11532 3685 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 WNK2Q9Y3S1 2297 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 A0A0J9YXV3 536 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 C19orf84I3L1E1 186 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 TRIAP1O43715 76 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 IGHV4-59P01825 116 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 Q1T7F1 81 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 MUC4Q99102 2169 aa3.99□□□□□ -1.77
GABPB1-207ENST00000558335 ABCA4P78363 2273 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 TTC28Q96AY4 2481 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 GVINP1Q7Z2Y8 2422 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 DNAL4O96015 105 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 FSHBP01225 129 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 GHRHP01286 108 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 APOC4P55056 127 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 DEFB131AP59861 70 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 UBE2BP63146 152 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 PHF5AQ7RTV0 110 aaKnown RBP3.98□□□□□ -1.77
GABPB1-207ENST00000558335 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 ZNF702PQ9H963 129 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 TLN1Q9Y490 2541 aaKnown RBP3.98□□□□□ -1.77
GABPB1-207ENST00000558335 RIF1Q5UIP0 2472 aaKnown RBP3.98□□□□□ -1.77
GABPB1-207ENST00000558335 NBEAQ8NFP9 2946 aa3.98□□□□□ -1.77
GABPB1-207ENST00000558335 ZFHX2Q9C0A1 2572 aaPredicted RBP3.97□□□□□ -1.77
GABPB1-207ENST00000558335 IGKV3-20P01619 116 aa3.97□□□□□ -1.77
GABPB1-207ENST00000558335 TSPEAR-AS2P59090 65 aa3.97□□□□□ -1.77
GABPB1-207ENST00000558335 ESRGQ1W209 222 aa3.97□□□□□ -1.77
GABPB1-207ENST00000558335 Q6ZS46 218 aa3.97□□□□□ -1.77
GABPB1-207ENST00000558335 TMEM61Q8N0U2 210 aa3.97□□□□□ -1.77
GABPB1-207ENST00000558335 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
GABPB1-207ENST00000558335 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
GABPB1-207ENST00000558335 COX7A2LO14548 114 aa3.96□□□□□ -1.78
GABPB1-207ENST00000558335 BAALC-AS2P0C853 105 aa3.96□□□□□ -1.78
GABPB1-207ENST00000558335 LYPD5Q6UWN5 251 aa3.96□□□□□ -1.78
GABPB1-207ENST00000558335 C16orf74Q96GX8 76 aa3.96□□□□□ -1.78
GABPB1-207ENST00000558335 CHCHD7Q9BUK0 85 aa3.96□□□□□ -1.78
GABPB1-207ENST00000558335 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
GABPB1-207ENST00000558335 C11orf68Q9H3H3 251 aaKnown RBP3.96□□□□□ -1.78
GABPB1-207ENST00000558335 MAP6D1Q9H9H5 199 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms