RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TSHBP01222 138 aa9.9□□□□□ -0.82
SCFD1-224ENST00000557713 CARD19Q96LW7 228 aa9.9□□□□□ -0.82
SCFD1-224ENST00000557713 PKIGQ9Y2B9 76 aa9.9□□□□□ -0.82
SCFD1-224ENST00000557713 REG3GQ6UW15 175 aa9.89□□□□□ -0.83
SCFD1-224ENST00000557713 FAM231DQ6ZW35 169 aa9.89□□□□□ -0.83
SCFD1-224ENST00000557713 SLC51BQ86UW2 128 aa9.89□□□□□ -0.83
SCFD1-224ENST00000557713 FAM210AQ96ND0 272 aa9.89□□□□□ -0.83
SCFD1-224ENST00000557713 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
SCFD1-224ENST00000557713 A8MWL6 223 aa9.88□□□□□ -0.83
SCFD1-224ENST00000557713 POLR2KP53803 58 aaKnown RBP9.88□□□□□ -0.83
SCFD1-224ENST00000557713 SYCNQ0VAF6 134 aa9.88□□□□□ -0.83
SCFD1-224ENST00000557713 SS18Q15532 418 aa9.88□□□□□ -0.83
SCFD1-224ENST00000557713 CD164L2Q6UWJ8 174 aa9.88□□□□□ -0.83
SCFD1-224ENST00000557713 Q6ZRP5 223 aa9.88□□□□□ -0.83
SCFD1-224ENST00000557713 MRPL52Q86TS9 123 aaKnown RBP9.88□□□□□ -0.83
SCFD1-224ENST00000557713 ST20Q9HBF5 79 aa9.88□□□□□ -0.83
SCFD1-224ENST00000557713 TMEM242Q9NWH2 141 aa9.88□□□□□ -0.83
SCFD1-224ENST00000557713 ZNF664Q8N3J9 261 aa9.87□□□□□ -0.83
SCFD1-224ENST00000557713 MRAP2Q96G30 205 aa9.87□□□□□ -0.83
SCFD1-224ENST00000557713 TMEM250H0YL14 139 aa9.86□□□□□ -0.83
SCFD1-224ENST00000557713 ZNF561-AS1K7EIQ3 104 aa9.86□□□□□ -0.83
SCFD1-224ENST00000557713 CT83Q5H943 113 aa9.86□□□□□ -0.83
SCFD1-224ENST00000557713 TCTE3Q8IZS6 198 aa9.86□□□□□ -0.83
SCFD1-224ENST00000557713 TRBV27A0A0K0K1C4 114 aa9.85□□□□□ -0.83
SCFD1-224ENST00000557713 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
SCFD1-224ENST00000557713 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
SCFD1-224ENST00000557713 RAB4AP20338 218 aa9.84□□□□□ -0.83
SCFD1-224ENST00000557713 CAMPP49913 170 aa9.84□□□□□ -0.83
SCFD1-224ENST00000557713 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
SCFD1-224ENST00000557713 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
SCFD1-224ENST00000557713 BORCS7Q96B45 105 aa9.83□□□□□ -0.84
SCFD1-224ENST00000557713 A0A1B0GUT8 65 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 A0A1W2PNN7 141 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 C7orf77A4D0Y5 90 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 C1orf196B1AJZ1 125 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 GAGE2BQ13066 116 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 NUP35Q8NFH5 326 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 TSKUQ8WUA8 353 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 ISOC2Q96AB3 205 aa9.82□□□□□ -0.84
SCFD1-224ENST00000557713 HIGD1CA8MV81 97 aa9.81□□□□□ -0.84
SCFD1-224ENST00000557713 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
SCFD1-224ENST00000557713 CSDC2Q9Y534 153 aaKnown RBP9.81□□□□□ -0.84
SCFD1-224ENST00000557713 COX7A2LO14548 114 aa9.8□□□□□ -0.84
SCFD1-224ENST00000557713 VCYO14598 125 aa9.8□□□□□ -0.84
SCFD1-224ENST00000557713 MALP21145 153 aa9.8□□□□□ -0.84
SCFD1-224ENST00000557713 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
SCFD1-224ENST00000557713 CEBPGP53567 150 aa9.79□□□□□ -0.84
SCFD1-224ENST00000557713 LINC01551Q86U37 167 aa9.79□□□□□ -0.84
SCFD1-224ENST00000557713 C2orf48Q96LS8 159 aa9.79□□□□□ -0.84
SCFD1-224ENST00000557713 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
SCFD1-224ENST00000557713 SMKR1H3BMG3 65 aa9.78□□□□□ -0.84
SCFD1-224ENST00000557713 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
SCFD1-224ENST00000557713 APOMO95445 188 aa9.78□□□□□ -0.84
SCFD1-224ENST00000557713 FCER1GP30273 86 aa9.78□□□□□ -0.84
SCFD1-224ENST00000557713 NRACQ8N912 160 aa9.78□□□□□ -0.84
SCFD1-224ENST00000557713 CAMK2N2Q96S95 79 aa9.78□□□□□ -0.84
SCFD1-224ENST00000557713 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
SCFD1-224ENST00000557713 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
SCFD1-224ENST00000557713 C9orf116Q5BN46 136 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-224ENST00000557713 RNASE13Q5GAN3 156 aaKnown RBP9.77□□□□□ -0.85
SCFD1-224ENST00000557713 ALKAL2Q6UX46 152 aa9.77□□□□□ -0.85
SCFD1-224ENST00000557713 SMIM7Q9BQ49 75 aa9.77□□□□□ -0.85
SCFD1-224ENST00000557713 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
SCFD1-224ENST00000557713 PPP1R17O96001 155 aa9.76□□□□□ -0.85
SCFD1-224ENST00000557713 SUMO2P61956 95 aaKnown RBP9.76□□□□□ -0.85
SCFD1-224ENST00000557713 SMAGPQ0VAQ4 97 aa9.76□□□□□ -0.85
SCFD1-224ENST00000557713 C5orf38Q86SI9 138 aa9.76□□□□□ -0.85
SCFD1-224ENST00000557713 RIGQ13278 110 aa9.75□□□□□ -0.85
SCFD1-224ENST00000557713 RNF151Q2KHN1 245 aa9.75□□□□□ -0.85
SCFD1-224ENST00000557713 TIMM21Q9BVV7 248 aa9.75□□□□□ -0.85
SCFD1-224ENST00000557713 V9GYV3 84 aa9.75□□□□□ -0.85
SCFD1-224ENST00000557713 MT-ND6P03923 174 aa9.74□□□□□ -0.85
SCFD1-224ENST00000557713 PHF5AQ7RTV0 110 aaKnown RBP9.74□□□□□ -0.85
SCFD1-224ENST00000557713 KIR2DL4Q99706 377 aa9.74□□□□□ -0.85
SCFD1-224ENST00000557713 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-224ENST00000557713 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
SCFD1-224ENST00000557713 LPAP08519 4548 aa9.74□□□□□ -0.85
SCFD1-224ENST00000557713 ZNF727A8MUV8 499 aa9.73□□□□□ -0.85
SCFD1-224ENST00000557713 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
SCFD1-224ENST00000557713 C1orf137Q5JT78 98 aa9.73□□□□□ -0.85
SCFD1-224ENST00000557713 Q6ZUT4 128 aa9.73□□□□□ -0.85
SCFD1-224ENST00000557713 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
SCFD1-224ENST00000557713 SRP19P09132 144 aaKnown RBP9.72□□□□□ -0.85
SCFD1-224ENST00000557713 SPAG11BQ08648 103 aa9.72□□□□□ -0.85
SCFD1-224ENST00000557713 MRPL51Q4U2R6 128 aaKnown RBP9.72□□□□□ -0.85
SCFD1-224ENST00000557713 OR10D4PQ8NGN7 298 aa9.72□□□□□ -0.85
SCFD1-224ENST00000557713 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
SCFD1-224ENST00000557713 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.86
SCFD1-224ENST00000557713 TMEM18Q96B42 140 aa9.71□□□□□ -0.86
SCFD1-224ENST00000557713 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.86
SCFD1-224ENST00000557713 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
SCFD1-224ENST00000557713 C20orf78Q9BR46 151 aa9.7□□□□□ -0.86
SCFD1-224ENST00000557713 NAT8BQ9UHF3 227 aa9.7□□□□□ -0.86
SCFD1-224ENST00000557713 IGHV3OR16-9A0A0B4J2B5 98 aa9.69□□□□□ -0.86
SCFD1-224ENST00000557713 LINC00862A6NCI5 91 aa9.69□□□□□ -0.86
SCFD1-224ENST00000557713 F8WDY8 70 aa9.69□□□□□ -0.86
SCFD1-224ENST00000557713 IGLV7-43P04211 117 aa9.69□□□□□ -0.86
SCFD1-224ENST00000557713 RPL32P62910 135 aaKnown RBP9.69□□□□□ -0.86
SCFD1-224ENST00000557713 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
SCFD1-224ENST00000557713 TMEM241Q24JQ0 296 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms