RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PMCHP20382 165 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 LINC01620Q4KN68 170 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 LINC01551Q86U37 167 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 TSKUQ8WUA8 353 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 BTF3L4Q96K17 158 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 CHAC1Q9BUX1 264 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 SDHAF1A6NFY7 115 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 H7C423 109 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 I3L3M4 83 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 PPP1R17O96001 155 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 APCSP02743 223 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 TMEM241Q24JQ0 296 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 RNASEKQ6P5S7 137 aaKnown RBP4.79□□□□□ -1.64
SCFD1-222ENST00000556768 Q6ZSA8 131 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 Q75L30 129 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 DEFB104AQ8WTQ1 72 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 DPH3Q96FX2 82 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 TMEM101Q96IK0 257 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 OSTCQ9NRP0 149 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 PAM16Q9Y3D7 125 aa4.79□□□□□ -1.64
SCFD1-222ENST00000556768 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 hDV102S1A0JD36 115 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 RIGQ13278 110 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 PEA15Q15121 130 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 C20orf203Q8NBC4 194 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 TMEM191AQ9H0A3 160 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 SMDT1Q9H4I9 107 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 ST20Q9HBF5 79 aa4.78□□□□□ -1.64
SCFD1-222ENST00000556768 DMBT1Q9UGM3 2413 aaPredicted RBP4.78□□□□□ -1.65
SCFD1-222ENST00000556768 IGLV4-60A0A075B6I1 120 aa4.77□□□□□ -1.65
SCFD1-222ENST00000556768 PRSS1P07477 247 aa4.77□□□□□ -1.65
SCFD1-222ENST00000556768 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
SCFD1-222ENST00000556768 SMAGPQ0VAQ4 97 aa4.77□□□□□ -1.65
SCFD1-222ENST00000556768 PAPPA-AS1Q5QFB9 102 aa4.77□□□□□ -1.65
SCFD1-222ENST00000556768 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
SCFD1-222ENST00000556768 HERC1Q15751 4861 aa4.77□□□□□ -1.65
SCFD1-222ENST00000556768 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
SCFD1-222ENST00000556768 IGKV3OR2-268A0A0C4DH90 116 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 SRP19P09132 144 aaKnown RBP4.76□□□□□ -1.65
SCFD1-222ENST00000556768 ZNF25P17030 456 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-222ENST00000556768 ADIRFQ15847 76 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 C9orf163Q8N9P6 203 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 MRAP2Q96G30 205 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 NAT8BQ9UHF3 227 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 TRBV6-5A0A0K0K1A5 114 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 A0A1B0GVG6 124 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 FGF6P10767 208 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 FCER1GP30273 86 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 NAT8Q9UHE5 227 aa4.76□□□□□ -1.65
SCFD1-222ENST00000556768 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-222ENST00000556768 A0A1B0GW15 77 aa4.75□□□□□ -1.65
SCFD1-222ENST00000556768 IGKV2-29A2NJV5 120 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-222ENST00000556768 S100A8P05109 93 aa4.75□□□□□ -1.65
SCFD1-222ENST00000556768 CNBPP62633 177 aaKnown RBP4.75□□□□□ -1.65
SCFD1-222ENST00000556768 NUP35Q8NFH5 326 aa4.75□□□□□ -1.65
SCFD1-222ENST00000556768 OR5A1Q8NGJ0 315 aa4.75□□□□□ -1.65
SCFD1-222ENST00000556768 ISOC2Q96AB3 205 aa4.75□□□□□ -1.65
SCFD1-222ENST00000556768 KIR2DL4Q99706 377 aa4.75□□□□□ -1.65
SCFD1-222ENST00000556768 IGHV3-64A0A075B6Q5 118 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 RAB4AP20338 218 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 RAB14P61106 215 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 AMN1Q8IY45 258 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 V9GYV3 84 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 TRBV27A0A0K0K1C4 114 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 C7orf77A4D0Y5 90 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 LINC00862A6NCI5 91 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 F8W036 122 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 PPP1R2P9O14990 202 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 TCAPO15273 167 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 RPL23P62829 140 aaKnown RBP4.74□□□□□ -1.65
SCFD1-222ENST00000556768 SS18Q15532 418 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 KRTAP26-1Q6PEX3 210 aa4.74□□□□□ -1.65
SCFD1-222ENST00000556768 CHCHD10Q8WYQ3 142 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-222ENST00000556768 CKS2P33552 79 aa4.73□□□□□ -1.65
SCFD1-222ENST00000556768 RPS10P46783 165 aaKnown RBP4.73□□□□□ -1.65
SCFD1-222ENST00000556768 POLR2KP53803 58 aaKnown RBP4.73□□□□□ -1.65
SCFD1-222ENST00000556768 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SCFD1-222ENST00000556768 PKIGQ9Y2B9 76 aa4.73□□□□□ -1.65
SCFD1-222ENST00000556768 SMIM27A0A1W2PRY6 76 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 XCL1P47992 114 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 FAM104BQ5XKR9 115 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 SDIM1Q6ZPB5 146 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 ZNF664Q8N3J9 261 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 RNF185Q96GF1 192 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 TMEM242Q9NWH2 141 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 FLG2Q5D862 2391 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-222ENST00000556768 C1orf196B1AJZ1 125 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 F8WDY8 70 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 CCL25O15444 150 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 TSHBP01222 138 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 ESDP10768 282 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 MRPL52Q86TS9 123 aaKnown RBP4.72□□□□□ -1.65
SCFD1-222ENST00000556768 C20orf78Q9BR46 151 aa4.72□□□□□ -1.65
SCFD1-222ENST00000556768 LINC00959A0A1B0GUT2 108 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms