RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 OSTCQ9NRP0 149 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 A0A1B0GUT8 65 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 GAGE12HA6NDE8 117 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 A8MWL6 223 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 RAB4AP20338 218 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
TMEM260-209ENST00000556079 Q0VG73 95 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 COTL1Q14019 142 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 ELOBQ15370 118 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 TMEM241Q24JQ0 296 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 HIGD2BQ4VC39 106 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 CIRBP-AS1Q8TBR5 109 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 LINC00526Q96FQ7 95 aa4.11□□□□□ -1.75
TMEM260-209ENST00000556079 TNXBP22105 4242 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 UBE2L6O14933 153 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 SCGB1D1O95968 90 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 APCSP02743 223 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 FGF6P10767 208 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 CAMPP49913 170 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 HNRNPA3P51991 378 aaKnown RBP4.1□□□□□ -1.75
TMEM260-209ENST00000556079 MIAQ16674 131 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 MRPL51Q4U2R6 128 aaKnown RBP4.1□□□□□ -1.75
TMEM260-209ENST00000556079 MRPL54Q6P161 138 aaKnown RBP4.1□□□□□ -1.75
TMEM260-209ENST00000556079 RNASEKQ6P5S7 137 aaKnown RBP4.1□□□□□ -1.75
TMEM260-209ENST00000556079 C15orf56Q8N910 161 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 NRACQ8N912 160 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 NAT8Q9UHE5 227 aa4.1□□□□□ -1.75
TMEM260-209ENST00000556079 hDV102S1A0JD36 115 aa4.09□□□□□ -1.75
TMEM260-209ENST00000556079 PMCHP20382 165 aa4.09□□□□□ -1.75
TMEM260-209ENST00000556079 TMEM97Q5BJF2 176 aa4.09□□□□□ -1.75
TMEM260-209ENST00000556079 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.09□□□□□ -1.75
TMEM260-209ENST00000556079 CHCHD10Q8WYQ3 142 aaPredicted RBP4.09□□□□□ -1.75
TMEM260-209ENST00000556079 CHAC1Q9BUX1 264 aa4.09□□□□□ -1.75
TMEM260-209ENST00000556079 TMEM191AQ9H0A3 160 aa4.09□□□□□ -1.75
TMEM260-209ENST00000556079 ST20Q9HBF5 79 aa4.09□□□□□ -1.75
TMEM260-209ENST00000556079 COX11Q9Y6N1 276 aa4.09□□□□□ -1.75
TMEM260-209ENST00000556079 TRBV6-5A0A0K0K1A5 114 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 A0A1B0GUV1 79 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 SMIM27A0A1W2PRY6 76 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 NPYP01303 97 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 ESDP10768 282 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 XCL1P47992 114 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 POLR2KP53803 58 aaKnown RBP4.08□□□□□ -1.76
TMEM260-209ENST00000556079 IFITM2Q01629 132 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 FAM74A3Q4VXF1 159 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 AMMECR1LQ6DCA0 310 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 SMIM15Q7Z3B0 74 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 BORCS7Q96B45 105 aa4.08□□□□□ -1.76
TMEM260-209ENST00000556079 OPRPNQ99935 248 aaPredicted RBP4.08□□□□□ -1.76
TMEM260-209ENST00000556079 A0A1B0GXF2 115 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 KRTAP29-1A8MX34 341 aaPredicted RBP4.07□□□□□ -1.76
TMEM260-209ENST00000556079 I3L3M4 83 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 CCL25O15444 150 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 ADCYAP1P18509 176 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 PKIAP61925 76 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 RPL39P62891 51 aaKnown RBP4.07□□□□□ -1.76
TMEM260-209ENST00000556079 FOXI1Q12951 378 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 RIGQ13278 110 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 PEA15Q15121 130 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 FAM104BQ5XKR9 115 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 SDIM1Q6ZPB5 146 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 Q6ZUT4 128 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 NAT8BQ9UHF3 227 aa4.07□□□□□ -1.76
TMEM260-209ENST00000556079 TRBV27A0A0K0K1C4 114 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 LINC00959A0A1B0GUT2 108 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 D6R8Y8 96 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 TCAPO15273 167 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 NDUFS6O75380 124 aaKnown RBP4.06□□□□□ -1.76
TMEM260-209ENST00000556079 PTTG1IPP53801 180 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 C14orf177Q52M58 125 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 C9orf163Q8N9P6 203 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 PRSS3P2Q8NHM4 247 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 MRAP2Q96G30 205 aa4.06□□□□□ -1.76
TMEM260-209ENST00000556079 TRAV8-4A0A0B4J246 113 aa4.05□□□□□ -1.76
TMEM260-209ENST00000556079 C7orf77A4D0Y5 90 aa4.05□□□□□ -1.76
TMEM260-209ENST00000556079 FCER1GP30273 86 aa4.05□□□□□ -1.76
TMEM260-209ENST00000556079 SUMO2P61956 95 aaKnown RBP4.05□□□□□ -1.76
TMEM260-209ENST00000556079 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
TMEM260-209ENST00000556079 ZC2HC1BQ5TFG8 222 aa4.05□□□□□ -1.76
TMEM260-209ENST00000556079 OR5A1Q8NGJ0 315 aa4.05□□□□□ -1.76
TMEM260-209ENST00000556079 CDC42SE2Q9NRR3 84 aa4.05□□□□□ -1.76
TMEM260-209ENST00000556079 UBE2D4Q9Y2X8 147 aa4.05□□□□□ -1.76
TMEM260-209ENST00000556079 A0A096LNI7 61 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 TRAV13-1A0A0B4J241 112 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 IGKV2-24A0A0C4DH68 120 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 CKS2P33552 79 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 HBBP68871 147 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 COX6A2Q02221 97 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 MRPL52Q86TS9 123 aaKnown RBP4.04□□□□□ -1.76
TMEM260-209ENST00000556079 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 SMIM2Q9BVW6 85 aa4.04□□□□□ -1.76
TMEM260-209ENST00000556079 IGHV3-64A0A075B6Q5 118 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 A0A087WYN8 130 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
TMEM260-209ENST00000556079 A0A0J9YXV3 536 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 LOC389332A0A1B0GUA5 103 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 VCYO14598 125 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms