RNA–Protein interactions for RNA: ENST00000555498.5

KTN1-221, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 3

Gene KTN1, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-221ENST00000555498 TSHBP01222 138 aa12.53□□□□□ -0.4
KTN1-221ENST00000555498 MRPL52Q86TS9 123 aaKnown RBP12.53□□□□□ -0.4
KTN1-221ENST00000555498 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
KTN1-221ENST00000555498 A0A1B0GUT8 65 aa12.52□□□□□ -0.41
KTN1-221ENST00000555498 ZNF561-AS1K7EIQ3 104 aa12.52□□□□□ -0.41
KTN1-221ENST00000555498 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.41
KTN1-221ENST00000555498 TMEM191AQ9H0A3 160 aa12.52□□□□□ -0.41
KTN1-221ENST00000555498 CDC42SE2Q9NRR3 84 aa12.52□□□□□ -0.41
KTN1-221ENST00000555498 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.41
KTN1-221ENST00000555498 TRBV27A0A0K0K1C4 114 aa12.51□□□□□ -0.41
KTN1-221ENST00000555498 POLR2KP53803 58 aaKnown RBP12.51□□□□□ -0.41
KTN1-221ENST00000555498 SYCNQ0VAF6 134 aa12.51□□□□□ -0.41
KTN1-221ENST00000555498 SPINK6Q6UWN8 80 aa12.51□□□□□ -0.41
KTN1-221ENST00000555498 ZNF664Q8N3J9 261 aa12.5□□□□□ -0.41
KTN1-221ENST00000555498 TSKUQ8WUA8 353 aa12.5□□□□□ -0.41
KTN1-221ENST00000555498 C7orf77A4D0Y5 90 aa12.49□□□□□ -0.41
KTN1-221ENST00000555498 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
KTN1-221ENST00000555498 CEBPGP53567 150 aa12.49□□□□□ -0.41
KTN1-221ENST00000555498 REG3GQ6UW15 175 aa12.49□□□□□ -0.41
KTN1-221ENST00000555498 ISOC2Q96AB3 205 aa12.49□□□□□ -0.41
KTN1-221ENST00000555498 LINC00526Q96FQ7 95 aa12.49□□□□□ -0.41
KTN1-221ENST00000555498 A0A0J9YXV3 536 aa12.48□□□□□ -0.41
KTN1-221ENST00000555498 HIGD1CA8MV81 97 aa12.48□□□□□ -0.41
KTN1-221ENST00000555498 RAB4AP20338 218 aa12.48□□□□□ -0.41
KTN1-221ENST00000555498 SMAGPQ0VAQ4 97 aa12.48□□□□□ -0.41
KTN1-221ENST00000555498 ALKAL2Q6UX46 152 aa12.48□□□□□ -0.41
KTN1-221ENST00000555498 Q6ZRP5 223 aa12.48□□□□□ -0.41
KTN1-221ENST00000555498 C1orf196B1AJZ1 125 aa12.47□□□□□ -0.41
KTN1-221ENST00000555498 VCYO14598 125 aa12.47□□□□□ -0.41
KTN1-221ENST00000555498 PPP1R17O96001 155 aa12.47□□□□□ -0.41
KTN1-221ENST00000555498 SMIM7Q9BQ49 75 aa12.47□□□□□ -0.41
KTN1-221ENST00000555498 MALP21145 153 aa12.46□□□□□ -0.41
KTN1-221ENST00000555498 CAMPP49913 170 aa12.46□□□□□ -0.41
KTN1-221ENST00000555498 LINC01551Q86U37 167 aa12.46□□□□□ -0.41
KTN1-221ENST00000555498 OSTCQ9NRP0 149 aa12.46□□□□□ -0.41
KTN1-221ENST00000555498 CSDC2Q9Y534 153 aaKnown RBP12.46□□□□□ -0.41
KTN1-221ENST00000555498 FCER1GP30273 86 aa12.45□□□□□ -0.42
KTN1-221ENST00000555498 AMN1Q8IY45 258 aa12.45□□□□□ -0.42
KTN1-221ENST00000555498 EIF5A2Q9GZV4 153 aaKnown RBP12.45□□□□□ -0.42
KTN1-221ENST00000555498 LOC107984640A0A0U1RRK4 108 aa12.44□□□□□ -0.42
KTN1-221ENST00000555498 PTTG1IPP53801 180 aa12.44□□□□□ -0.42
KTN1-221ENST00000555498 RIGQ13278 110 aa12.44□□□□□ -0.42
KTN1-221ENST00000555498 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
KTN1-221ENST00000555498 COX7A2LO14548 114 aa12.43□□□□□ -0.42
KTN1-221ENST00000555498 KRTAP10-8P60410 259 aa12.43□□□□□ -0.42
KTN1-221ENST00000555498 SRSF9Q13242 221 aaKnown RBP eCLIP12.43□□□□□ -0.42
KTN1-221ENST00000555498 KIR2DL4Q99706 377 aa12.43□□□□□ -0.42
KTN1-221ENST00000555498 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
KTN1-221ENST00000555498 SUMO2P61956 95 aaKnown RBP12.41□□□□□ -0.42
KTN1-221ENST00000555498 GAGE2BQ13066 116 aa12.41□□□□□ -0.42
KTN1-221ENST00000555498 AKAP14Q86UN6 197 aa12.41□□□□□ -0.42
KTN1-221ENST00000555498 TNXBP22105 4242 aa12.4□□□□□ -0.42
KTN1-221ENST00000555498 PPP1R2P9O14990 202 aa12.4□□□□□ -0.42
KTN1-221ENST00000555498 TMEM18Q96B42 140 aa12.4□□□□□ -0.42
KTN1-221ENST00000555498 CAMK2N2Q96S95 79 aa12.4□□□□□ -0.42
KTN1-221ENST00000555498 UBE2D4Q9Y2X8 147 aa12.4□□□□□ -0.42
KTN1-221ENST00000555498 SMKR1H3BMG3 65 aa12.39□□□□□ -0.43
KTN1-221ENST00000555498 APOMO95445 188 aa12.39□□□□□ -0.43
KTN1-221ENST00000555498 NUP35Q8NFH5 326 aa12.39□□□□□ -0.43
KTN1-221ENST00000555498 C2orf48Q96LS8 159 aa12.39□□□□□ -0.43
KTN1-221ENST00000555498 TRAV13-1A0A0B4J241 112 aa12.38□□□□□ -0.43
KTN1-221ENST00000555498 NRACQ8N912 160 aa12.38□□□□□ -0.43
KTN1-221ENST00000555498 TIMM21Q9BVV7 248 aa12.38□□□□□ -0.43
KTN1-221ENST00000555498 V9GYV3 84 aa12.38□□□□□ -0.43
KTN1-221ENST00000555498 SRP19P09132 144 aaKnown RBP12.37□□□□□ -0.43
KTN1-221ENST00000555498 NAT8BQ9UHF3 227 aa12.37□□□□□ -0.43
KTN1-221ENST00000555498 C5orf38Q86SI9 138 aa12.36□□□□□ -0.43
KTN1-221ENST00000555498 A0A1W2PNN7 141 aa12.35□□□□□ -0.43
KTN1-221ENST00000555498 LINC00862A6NCI5 91 aa12.35□□□□□ -0.43
KTN1-221ENST00000555498 TCAPO15273 167 aa12.35□□□□□ -0.43
KTN1-221ENST00000555498 TMEM241Q24JQ0 296 aa12.35□□□□□ -0.43
KTN1-221ENST00000555498 RNF151Q2KHN1 245 aa12.35□□□□□ -0.43
KTN1-221ENST00000555498 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
KTN1-221ENST00000555498 ODF1Q14990 250 aa12.34□□□□□ -0.43
KTN1-221ENST00000555498 FAM74A3Q4VXF1 159 aa12.34□□□□□ -0.43
KTN1-221ENST00000555498 FAM104BQ5XKR9 115 aa12.34□□□□□ -0.43
KTN1-221ENST00000555498 C20orf78Q9BR46 151 aa12.34□□□□□ -0.43
KTN1-221ENST00000555498 LRP2P98164 4655 aa12.34□□□□□ -0.43
KTN1-221ENST00000555498 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.33□□□□□ -0.44
KTN1-221ENST00000555498 MT-ND6P03923 174 aa12.33□□□□□ -0.44
KTN1-221ENST00000555498 RPL18AQ02543 176 aaKnown RBP12.33□□□□□ -0.44
KTN1-221ENST00000555498 SPAG11BQ08648 103 aa12.33□□□□□ -0.44
KTN1-221ENST00000555498 MRPL51Q4U2R6 128 aaKnown RBP12.33□□□□□ -0.44
KTN1-221ENST00000555498 C9orf116Q5BN46 136 aaPredicted RBP12.33□□□□□ -0.44
KTN1-221ENST00000555498 Q6ZUT4 128 aa12.33□□□□□ -0.44
KTN1-221ENST00000555498 OR10D4PQ8NGN7 298 aa12.33□□□□□ -0.44
KTN1-221ENST00000555498 TRBV24-1A0A075B6N3 115 aa12.32□□□□□ -0.44
KTN1-221ENST00000555498 A0A1B0GW15 77 aa12.32□□□□□ -0.44
KTN1-221ENST00000555498 F8WDY8 70 aa12.32□□□□□ -0.44
KTN1-221ENST00000555498 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
KTN1-221ENST00000555498 PSORS1C2Q9UIG4 136 aa12.32□□□□□ -0.44
KTN1-221ENST00000555498 CKS2P33552 79 aa12.31□□□□□ -0.44
KTN1-221ENST00000555498 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
KTN1-221ENST00000555498 SMIM27A0A1W2PRY6 76 aa12.29□□□□□ -0.44
KTN1-221ENST00000555498 IMMP2LQ96T52 175 aa12.29□□□□□ -0.44
KTN1-221ENST00000555498 OPRPNQ99935 248 aaPredicted RBP12.29□□□□□ -0.44
KTN1-221ENST00000555498 SPANXA1Q9NS26 97 aa12.29□□□□□ -0.44
KTN1-221ENST00000555498 MRPL35Q9NZE8 188 aaKnown RBP12.29□□□□□ -0.44
KTN1-221ENST00000555498 hCG_2014768A0A024R1R8 64 aa12.28□□□□□ -0.44
KTN1-221ENST00000555498 ADIRFQ15847 76 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms