RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 BTF3L4Q96K17 158 aa9.77□□□□□ -0.85
ARHGEF40-205ENST00000555052 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
ARHGEF40-205ENST00000555052 FAM210AQ96ND0 272 aa9.77□□□□□ -0.85
ARHGEF40-205ENST00000555052 POLR2KP53803 58 aaKnown RBP9.76□□□□□ -0.85
ARHGEF40-205ENST00000555052 MRAP2Q96G30 205 aa9.76□□□□□ -0.85
ARHGEF40-205ENST00000555052 ST20Q9HBF5 79 aa9.76□□□□□ -0.85
ARHGEF40-205ENST00000555052 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
ARHGEF40-205ENST00000555052 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
ARHGEF40-205ENST00000555052 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
ARHGEF40-205ENST00000555052 TRBV27A0A0K0K1C4 114 aa9.75□□□□□ -0.85
ARHGEF40-205ENST00000555052 ODF1Q14990 250 aa9.75□□□□□ -0.85
ARHGEF40-205ENST00000555052 CD164L2Q6UWJ8 174 aa9.75□□□□□ -0.85
ARHGEF40-205ENST00000555052 TMEM191AQ9H0A3 160 aa9.75□□□□□ -0.85
ARHGEF40-205ENST00000555052 A0A1B0GUT8 65 aa9.74□□□□□ -0.85
ARHGEF40-205ENST00000555052 C7orf77A4D0Y5 90 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 HIGD1CA8MV81 97 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 KRTAP10-8P60410 259 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 BLOC1S1P78537 153 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 SRSF9Q13242 221 aaKnown RBP eCLIP9.73□□□□□ -0.852e-6■□□□□ 8.7
ARHGEF40-205ENST00000555052 SS18Q15532 418 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 ALKAL2Q6UX46 152 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 ZNF664Q8N3J9 261 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 TSKUQ8WUA8 353 aa9.73□□□□□ -0.85
ARHGEF40-205ENST00000555052 RAB4AP20338 218 aa9.72□□□□□ -0.85
ARHGEF40-205ENST00000555052 LINC01551Q86U37 167 aa9.72□□□□□ -0.85
ARHGEF40-205ENST00000555052 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
ARHGEF40-205ENST00000555052 ZNF561-AS1K7EIQ3 104 aa9.71□□□□□ -0.86
ARHGEF40-205ENST00000555052 CAMPP49913 170 aa9.71□□□□□ -0.86
ARHGEF40-205ENST00000555052 CEBPGP53567 150 aa9.71□□□□□ -0.86
ARHGEF40-205ENST00000555052 PTTG1IPP53801 180 aa9.71□□□□□ -0.86
ARHGEF40-205ENST00000555052 Q6ZRP5 223 aa9.71□□□□□ -0.86
ARHGEF40-205ENST00000555052 AMN1Q8IY45 258 aa9.71□□□□□ -0.86
ARHGEF40-205ENST00000555052 SMIM7Q9BQ49 75 aa9.71□□□□□ -0.86
ARHGEF40-205ENST00000555052 hCG_2014768A0A024R1R8 64 aa9.7□□□□□ -0.86
ARHGEF40-205ENST00000555052 REG3GQ6UW15 175 aa9.7□□□□□ -0.86
ARHGEF40-205ENST00000555052 AKAP14Q86UN6 197 aa9.7□□□□□ -0.86
ARHGEF40-205ENST00000555052 OSTCQ9NRP0 149 aa9.7□□□□□ -0.86
ARHGEF40-205ENST00000555052 CSDC2Q9Y534 153 aaKnown RBP9.7□□□□□ -0.86
ARHGEF40-205ENST00000555052 SMKR1H3BMG3 65 aa9.69□□□□□ -0.86
ARHGEF40-205ENST00000555052 NRACQ8N912 160 aa9.69□□□□□ -0.86
ARHGEF40-205ENST00000555052 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
ARHGEF40-205ENST00000555052 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
ARHGEF40-205ENST00000555052 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
ARHGEF40-205ENST00000555052 COX7A2LO14548 114 aa9.68□□□□□ -0.86
ARHGEF40-205ENST00000555052 VCYO14598 125 aa9.68□□□□□ -0.86
ARHGEF40-205ENST00000555052 ISOC2Q96AB3 205 aa9.68□□□□□ -0.86
ARHGEF40-205ENST00000555052 UBE2D4Q9Y2X8 147 aa9.68□□□□□ -0.86
ARHGEF40-205ENST00000555052 LPAP08519 4548 aa9.67□□□□□ -0.86
ARHGEF40-205ENST00000555052 NUP35Q8NFH5 326 aa9.67□□□□□ -0.86
ARHGEF40-205ENST00000555052 V9GYV3 84 aa9.67□□□□□ -0.86
ARHGEF40-205ENST00000555052 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
ARHGEF40-205ENST00000555052 MALP21145 153 aa9.66□□□□□ -0.86
ARHGEF40-205ENST00000555052 FCER1GP30273 86 aa9.66□□□□□ -0.86
ARHGEF40-205ENST00000555052 SUMO2P61956 95 aaKnown RBP9.66□□□□□ -0.86
ARHGEF40-205ENST00000555052 GAGE2BQ13066 116 aa9.66□□□□□ -0.86
ARHGEF40-205ENST00000555052 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
ARHGEF40-205ENST00000555052 ZNF727A8MUV8 499 aa9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 APOMO95445 188 aa9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 PPP1R17O96001 155 aa9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 SRP19P09132 144 aaKnown RBP9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 RIGQ13278 110 aa9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 Q6ZUT4 128 aa9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 EIF5A2Q9GZV4 153 aaKnown RBP9.65□□□□□ -0.86
ARHGEF40-205ENST00000555052 TRAV13-1A0A0B4J241 112 aa9.64□□□□□ -0.87
ARHGEF40-205ENST00000555052 SMAGPQ0VAQ4 97 aa9.64□□□□□ -0.87
ARHGEF40-205ENST00000555052 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
ARHGEF40-205ENST00000555052 KIR2DL4Q99706 377 aa9.64□□□□□ -0.87
ARHGEF40-205ENST00000555052 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
ARHGEF40-205ENST00000555052 PPP1R2P9O14990 202 aa9.63□□□□□ -0.87
ARHGEF40-205ENST00000555052 MRPL51Q4U2R6 128 aaKnown RBP9.62□□□□□ -0.87
ARHGEF40-205ENST00000555052 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF40-205ENST00000555052 FAM104BQ5XKR9 115 aa9.62□□□□□ -0.87
ARHGEF40-205ENST00000555052 C5orf38Q86SI9 138 aa9.62□□□□□ -0.87
ARHGEF40-205ENST00000555052 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
ARHGEF40-205ENST00000555052 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
ARHGEF40-205ENST00000555052 RPL32P62910 135 aaKnown RBP9.61□□□□□ -0.87
ARHGEF40-205ENST00000555052 SPAG11BQ08648 103 aa9.61□□□□□ -0.87
ARHGEF40-205ENST00000555052 RNF151Q2KHN1 245 aa9.61□□□□□ -0.87
ARHGEF40-205ENST00000555052 NAT8BQ9UHF3 227 aa9.61□□□□□ -0.87
ARHGEF40-205ENST00000555052 TRBV24-1A0A075B6N3 115 aa9.6□□□□□ -0.87
ARHGEF40-205ENST00000555052 RPL18AQ02543 176 aaKnown RBP9.6□□□□□ -0.87
ARHGEF40-205ENST00000555052 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
ARHGEF40-205ENST00000555052 C20orf78Q9BR46 151 aa9.6□□□□□ -0.87
ARHGEF40-205ENST00000555052 RPL23P62829 140 aaKnown RBP9.59□□□□□ -0.87
ARHGEF40-205ENST00000555052 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
ARHGEF40-205ENST00000555052 FAM74A3Q4VXF1 159 aa9.59□□□□□ -0.87
ARHGEF40-205ENST00000555052 TMEM18Q96B42 140 aa9.59□□□□□ -0.87
ARHGEF40-205ENST00000555052 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF40-205ENST00000555052 IGHV3OR16-9A0A0B4J2B5 98 aa9.58□□□□□ -0.88
ARHGEF40-205ENST00000555052 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
ARHGEF40-205ENST00000555052 LINC00862A6NCI5 91 aa9.58□□□□□ -0.88
ARHGEF40-205ENST00000555052 MT-ND6P03923 174 aa9.58□□□□□ -0.88
ARHGEF40-205ENST00000555052 TMEM241Q24JQ0 296 aa9.58□□□□□ -0.88
ARHGEF40-205ENST00000555052 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
ARHGEF40-205ENST00000555052 MRPL35Q9NZE8 188 aaKnown RBP9.58□□□□□ -0.88
ARHGEF40-205ENST00000555052 A0A1B0GVG6 124 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms