RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 C9JQL5 133 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 PPP1R17O96001 155 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 ESDP10768 282 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 RAB4AP20338 218 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 PMCHP20382 165 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 ADIRFQ15847 76 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 CIRBP-AS1Q8TBR5 109 aa6.73□□□□□ -1.33
PTCD2P1-201ENST00000554393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 A0A1B0GW15 77 aa6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 SMIM27A0A1W2PRY6 76 aa6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 IGKV2-29A2NJV5 120 aaPredicted RBP6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 TSHBP01222 138 aa6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 FGF6P10767 208 aa6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 AMN1Q8IY45 258 aa6.72□□□□□ -1.33
PTCD2P1-201ENST00000554393 hDV102S1A0JD36 115 aa6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 RPS10P46783 165 aaKnown RBP6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 RNASEKQ6P5S7 137 aaKnown RBP6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 CFAP161Q6P656 301 aa6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 MRPL52Q86TS9 123 aaKnown RBP6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 OR5A1Q8NGJ0 315 aa6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 BTF3L4Q96K17 158 aa6.71□□□□□ -1.34
PTCD2P1-201ENST00000554393 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 GAGE12HA6NDE8 117 aa6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 VCYO14598 125 aa6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 PPP1R2P9O14990 202 aa6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 SDIM1Q6ZPB5 146 aa6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 NRACQ8N912 160 aa6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 CHCHD10Q8WYQ3 142 aaPredicted RBP6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 TMEM242Q9NWH2 141 aa6.7□□□□□ -1.34
PTCD2P1-201ENST00000554393 C7orf77A4D0Y5 90 aa6.69□□□□□ -1.34
PTCD2P1-201ENST00000554393 LINC00862A6NCI5 91 aa6.69□□□□□ -1.34
PTCD2P1-201ENST00000554393 S100A8P05109 93 aa6.69□□□□□ -1.34
PTCD2P1-201ENST00000554393 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
PTCD2P1-201ENST00000554393 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
PTCD2P1-201ENST00000554393 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
PTCD2P1-201ENST00000554393 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
PTCD2P1-201ENST00000554393 IGHV3-64A0A075B6Q5 118 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 GVQW2A0A096LPI5 108 aaPredicted RBP6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 FCER1GP30273 86 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 RPL32P62910 135 aaKnown RBP6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 SMAGPQ0VAQ4 97 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 KIR2DL4Q99706 377 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 C20orf78Q9BR46 151 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 CDC42SE2Q9NRR3 84 aa6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 TMA7Q9Y2S6 64 aaKnown RBP6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
PTCD2P1-201ENST00000554393 TRBV24-1A0A075B6N3 115 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 LINC00959A0A1B0GUT2 108 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 A0A1B0GXF2 115 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 TCAPO15273 167 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 SLPIP03973 132 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 CAMPP49913 170 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 KRTAP10-4P60372 401 aaPredicted RBP6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 HBBP68871 147 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 FOXI1Q12951 378 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
PTCD2P1-201ENST00000554393 F8W036 122 aa6.66□□□□□ -1.34
PTCD2P1-201ENST00000554393 CCL25O15444 150 aa6.66□□□□□ -1.34
PTCD2P1-201ENST00000554393 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
PTCD2P1-201ENST00000554393 SS18Q15532 418 aa6.66□□□□□ -1.34
PTCD2P1-201ENST00000554393 ATP5L2Q7Z4Y8 100 aa6.66□□□□□ -1.34
PTCD2P1-201ENST00000554393 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
PTCD2P1-201ENST00000554393 PANO1I0J062 215 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 PHOX2AO14813 284 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 PPBPP02775 128 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 CKS2P33552 79 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 XCL1P47992 114 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 RAB14P61106 215 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 TIMM21Q9BVV7 248 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 UBE2D4Q9Y2X8 147 aa6.65□□□□□ -1.34
PTCD2P1-201ENST00000554393 IGHV1-58A0A0C4DH39 117 aa6.64□□□□□ -1.35
PTCD2P1-201ENST00000554393 KRTAP29-1A8MX34 341 aaPredicted RBP6.64□□□□□ -1.35
PTCD2P1-201ENST00000554393 HIGD2BQ4VC39 106 aa6.64□□□□□ -1.35
PTCD2P1-201ENST00000554393 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
PTCD2P1-201ENST00000554393 CD164L2Q6UWJ8 174 aa6.64□□□□□ -1.35
PTCD2P1-201ENST00000554393 SPACA4Q8TDM5 124 aa6.64□□□□□ -1.35
PTCD2P1-201ENST00000554393 PKIGQ9Y2B9 76 aa6.64□□□□□ -1.35
PTCD2P1-201ENST00000554393 C1orf196B1AJZ1 125 aa6.63□□□□□ -1.35
PTCD2P1-201ENST00000554393 D6R8Y8 96 aa6.63□□□□□ -1.35
PTCD2P1-201ENST00000554393 TNFRSF6BO95407 300 aa6.63□□□□□ -1.35
PTCD2P1-201ENST00000554393 RPL37AP61513 92 aaKnown RBP6.63□□□□□ -1.35
PTCD2P1-201ENST00000554393 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
PTCD2P1-201ENST00000554393 MT-ND4LP03901 98 aa6.62□□□□□ -1.35
PTCD2P1-201ENST00000554393 ORMDL3Q8N138 153 aa6.62□□□□□ -1.35
PTCD2P1-201ENST00000554393 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
PTCD2P1-201ENST00000554393 A0A087WYN8 130 aa6.61□□□□□ -1.35
PTCD2P1-201ENST00000554393 NPYP01303 97 aa6.61□□□□□ -1.35
PTCD2P1-201ENST00000554393 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
PTCD2P1-201ENST00000554393 COX6A2Q02221 97 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms