RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 IMMP2LQ96T52 175 aa10□□□□□ -0.81
SHMT2-204ENST00000553324 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
SHMT2-204ENST00000553324 FAM30AQ9NZY2 134 aa10□□□□□ -0.81
SHMT2-204ENST00000553324 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
SHMT2-204ENST00000553324 D6R8Y8 96 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 TMEM136Q6ZRR5 245 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 ORMDL3Q8N138 153 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 ZNF664Q8N3J9 261 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 CDC42SE2Q9NRR3 84 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 AP5S1Q9NUS5 200 aa9.99□□□□□ -0.81
SHMT2-204ENST00000553324 GAGE12HA6NDE8 117 aa9.98□□□□□ -0.81
SHMT2-204ENST00000553324 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-204ENST00000553324 CTDSP1Q9GZU7 261 aa9.98□□□□□ -0.81
SHMT2-204ENST00000553324 hDV102S1A0JD36 115 aa9.97□□□□□ -0.81
SHMT2-204ENST00000553324 CCL25O15444 150 aa9.97□□□□□ -0.81
SHMT2-204ENST00000553324 SS18Q15532 418 aa9.97□□□□□ -0.81
SHMT2-204ENST00000553324 C9orf163Q8N9P6 203 aa9.97□□□□□ -0.81
SHMT2-204ENST00000553324 SEC11CQ9BY50 192 aa9.97□□□□□ -0.81
SHMT2-204ENST00000553324 LAMTOR2Q9Y2Q5 125 aa9.97□□□□□ -0.81
SHMT2-204ENST00000553324 FAT1Q14517 4588 aa9.96□□□□□ -0.81
SHMT2-204ENST00000553324 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-204ENST00000553324 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.82
SHMT2-204ENST00000553324 CNBPP62633 177 aaKnown RBP9.96□□□□□ -0.82
SHMT2-204ENST00000553324 LINC01620Q4KN68 170 aa9.96□□□□□ -0.82
SHMT2-204ENST00000553324 SMIM2Q9BVW6 85 aa9.96□□□□□ -0.82
SHMT2-204ENST00000553324 ABCA13Q86UQ4 5058 aa9.95□□□□□ -0.82
SHMT2-204ENST00000553324 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-204ENST00000553324 RAB5AP20339 215 aa9.95□□□□□ -0.82
SHMT2-204ENST00000553324 PRELID3AQ96N28 172 aa9.95□□□□□ -0.82
SHMT2-204ENST00000553324 CHAC1Q9BUX1 264 aa9.95□□□□□ -0.82
SHMT2-204ENST00000553324 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
SHMT2-204ENST00000553324 UBE2D4Q9Y2X8 147 aa9.95□□□□□ -0.82
SHMT2-204ENST00000553324 PRSS47A8MTI9 375 aa9.94□□□□□ -0.82
SHMT2-204ENST00000553324 C1orf196B1AJZ1 125 aa9.94□□□□□ -0.82
SHMT2-204ENST00000553324 NPYP01303 97 aa9.94□□□□□ -0.82
SHMT2-204ENST00000553324 ADCYAP1P18509 176 aa9.94□□□□□ -0.82
SHMT2-204ENST00000553324 Q5VSD8 79 aa9.94□□□□□ -0.82
SHMT2-204ENST00000553324 TRAV9-1A0A075B6T8 112 aa9.93□□□□□ -0.82
SHMT2-204ENST00000553324 XCL1P47992 114 aa9.93□□□□□ -0.82
SHMT2-204ENST00000553324 HAMPP81172 84 aa9.93□□□□□ -0.82
SHMT2-204ENST00000553324 FOXI1Q12951 378 aa9.93□□□□□ -0.82
SHMT2-204ENST00000553324 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
SHMT2-204ENST00000553324 COMMD7Q86VX2 200 aa9.93□□□□□ -0.82
SHMT2-204ENST00000553324 S100PP25815 95 aa9.91□□□□□ -0.82
SHMT2-204ENST00000553324 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
SHMT2-204ENST00000553324 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
SHMT2-204ENST00000553324 MAP1LC3AQ9H492 121 aa9.91□□□□□ -0.82
SHMT2-204ENST00000553324 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
SHMT2-204ENST00000553324 IGHV3-64A0A075B6Q5 118 aa9.9□□□□□ -0.82
SHMT2-204ENST00000553324 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
SHMT2-204ENST00000553324 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
SHMT2-204ENST00000553324 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
SHMT2-204ENST00000553324 GVQW2A0A096LPI5 108 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-204ENST00000553324 K7EMI3 77 aa9.89□□□□□ -0.83
SHMT2-204ENST00000553324 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
SHMT2-204ENST00000553324 MRPS36P82909 103 aaKnown RBP9.89□□□□□ -0.83
SHMT2-204ENST00000553324 C10orf91Q5T1B1 145 aa9.89□□□□□ -0.83
SHMT2-204ENST00000553324 CIRBP-AS1Q8TBR5 109 aa9.89□□□□□ -0.83
SHMT2-204ENST00000553324 TRAV13-1A0A0B4J241 112 aa9.88□□□□□ -0.83
SHMT2-204ENST00000553324 LOC389332A0A1B0GUA5 103 aa9.88□□□□□ -0.83
SHMT2-204ENST00000553324 SLPIP03973 132 aa9.88□□□□□ -0.83
SHMT2-204ENST00000553324 INAFM2P0DMQ5 153 aa9.88□□□□□ -0.83
SHMT2-204ENST00000553324 MALP21145 153 aa9.88□□□□□ -0.83
SHMT2-204ENST00000553324 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
SHMT2-204ENST00000553324 G0S2P27469 103 aa9.87□□□□□ -0.83
SHMT2-204ENST00000553324 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-204ENST00000553324 RHEBQ15382 184 aa9.87□□□□□ -0.83
SHMT2-204ENST00000553324 COX19Q49B96 90 aa9.87□□□□□ -0.83
SHMT2-204ENST00000553324 HIGD2BQ4VC39 106 aa9.87□□□□□ -0.83
SHMT2-204ENST00000553324 Q8N8P6 123 aa9.87□□□□□ -0.83
SHMT2-204ENST00000553324 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
SHMT2-204ENST00000553324 ZNF561-AS1K7EIQ3 104 aa9.86□□□□□ -0.83
SHMT2-204ENST00000553324 COX7A2LO14548 114 aa9.86□□□□□ -0.83
SHMT2-204ENST00000553324 ORMDL2Q53FV1 153 aa9.86□□□□□ -0.83
SHMT2-204ENST00000553324 Q6ZUT4 128 aa9.86□□□□□ -0.83
SHMT2-204ENST00000553324 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
SHMT2-204ENST00000553324 DPH3Q96FX2 82 aa9.86□□□□□ -0.83
SHMT2-204ENST00000553324 NXT2Q9NPJ8 142 aaKnown RBP9.86□□□□□ -0.83
SHMT2-204ENST00000553324 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
SHMT2-204ENST00000553324 CARHSP1Q9Y2V2 147 aaKnown RBP9.86□□□□□ -0.83
SHMT2-204ENST00000553324 APOMO95445 188 aa9.85□□□□□ -0.83
SHMT2-204ENST00000553324 RNASE13Q5GAN3 156 aaKnown RBP9.85□□□□□ -0.83
SHMT2-204ENST00000553324 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
SHMT2-204ENST00000553324 RPS10P5Q9NQ39 176 aa9.84□□□□□ -0.83
SHMT2-204ENST00000553324 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
SHMT2-204ENST00000553324 CYSLTR1Q9Y271 337 aa9.83□□□□□ -0.84
SHMT2-204ENST00000553324 NPSP0C0P6 89 aa9.82□□□□□ -0.84
SHMT2-204ENST00000553324 NDUFA5Q16718 116 aa9.82□□□□□ -0.84
SHMT2-204ENST00000553324 TMEM141Q96I45 108 aa9.82□□□□□ -0.84
SHMT2-204ENST00000553324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-204ENST00000553324 IFITM10A6NMD0 228 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 MT-ND6P03923 174 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 COX6A2Q02221 97 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 C2orf66Q6UXQ4 117 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 Q6ZN92 141 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 FAM104AQ969W3 186 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 OPRPNQ99935 248 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms