RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 FAM104AQ969W3 186 aa12.43□□□□□ -0.42
PTCH1-227ENST00000553256 C7orf77A4D0Y5 90 aa12.42□□□□□ -0.42
PTCH1-227ENST00000553256 GAGE12HA6NDE8 117 aa12.42□□□□□ -0.42
PTCH1-227ENST00000553256 TNFRSF6BO95407 300 aa12.42□□□□□ -0.42
PTCH1-227ENST00000553256 FOXI1Q12951 378 aa12.42□□□□□ -0.42
PTCH1-227ENST00000553256 CHCHD10Q8WYQ3 142 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-227ENST00000553256 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
PTCH1-227ENST00000553256 CHAC1Q9BUX1 264 aa12.42□□□□□ -0.42
PTCH1-227ENST00000553256 CSDC2Q9Y534 153 aaKnown RBP12.42□□□□□ -0.42
PTCH1-227ENST00000553256 D6R8Y8 96 aa12.41□□□□□ -0.42
PTCH1-227ENST00000553256 NPYP01303 97 aa12.41□□□□□ -0.42
PTCH1-227ENST00000553256 S100A8P05109 93 aa12.41□□□□□ -0.42
PTCH1-227ENST00000553256 UQCC3Q6UW78 93 aa12.41□□□□□ -0.42
PTCH1-227ENST00000553256 SDIM1Q6ZPB5 146 aa12.41□□□□□ -0.42
PTCH1-227ENST00000553256 UBE2D4Q9Y2X8 147 aa12.41□□□□□ -0.42
PTCH1-227ENST00000553256 LINC00959A0A1B0GUT2 108 aa12.4□□□□□ -0.42
PTCH1-227ENST00000553256 TMEM218A2RU14 115 aa12.4□□□□□ -0.42
PTCH1-227ENST00000553256 PHOX2AO14813 284 aa12.4□□□□□ -0.42
PTCH1-227ENST00000553256 CKS2P33552 79 aa12.4□□□□□ -0.42
PTCH1-227ENST00000553256 PKHD1L1Q86WI1 4243 aa12.39□□□□□ -0.43
PTCH1-227ENST00000553256 F8W036 122 aa12.39□□□□□ -0.43
PTCH1-227ENST00000553256 PANO1I0J062 215 aa12.39□□□□□ -0.43
PTCH1-227ENST00000553256 MT-ND4LP03901 98 aa12.39□□□□□ -0.43
PTCH1-227ENST00000553256 KRTAP10-4P60372 401 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-227ENST00000553256 CIRBP-AS1Q8TBR5 109 aa12.39□□□□□ -0.43
PTCH1-227ENST00000553256 SMIM2Q9BVW6 85 aa12.39□□□□□ -0.43
PTCH1-227ENST00000553256 IGKV3OR2-268A0A0C4DH90 116 aa12.38□□□□□ -0.43
PTCH1-227ENST00000553256 PRSS47A8MTI9 375 aa12.38□□□□□ -0.43
PTCH1-227ENST00000553256 PPBPP02775 128 aa12.38□□□□□ -0.43
PTCH1-227ENST00000553256 ZNF664Q8N3J9 261 aa12.38□□□□□ -0.43
PTCH1-227ENST00000553256 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
PTCH1-227ENST00000553256 KIR2DL4Q99706 377 aa12.37□□□□□ -0.43
PTCH1-227ENST00000553256 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
PTCH1-227ENST00000553256 hDV102S1A0JD36 115 aa12.36□□□□□ -0.43
PTCH1-227ENST00000553256 TMEM101Q96IK0 257 aa12.36□□□□□ -0.43
PTCH1-227ENST00000553256 BTF3L4Q96K17 158 aa12.36□□□□□ -0.43
PTCH1-227ENST00000553256 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-227ENST00000553256 FLG2Q5D862 2391 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-227ENST00000553256 GVQW2A0A096LPI5 108 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-227ENST00000553256 FCER1GP30273 86 aa12.35□□□□□ -0.43
PTCH1-227ENST00000553256 IMMP2LQ96T52 175 aa12.35□□□□□ -0.43
PTCH1-227ENST00000553256 CCL25O15444 150 aa12.34□□□□□ -0.43
PTCH1-227ENST00000553256 C10orf91Q5T1B1 145 aa12.34□□□□□ -0.43
PTCH1-227ENST00000553256 TMEM136Q6ZRR5 245 aa12.34□□□□□ -0.43
PTCH1-227ENST00000553256 ORMDL3Q8N138 153 aa12.34□□□□□ -0.43
PTCH1-227ENST00000553256 FAT3Q8TDW7 4589 aa12.33□□□□□ -0.44
PTCH1-227ENST00000553256 LRP1Q07954 4544 aaKnown RBP12.33□□□□□ -0.44
PTCH1-227ENST00000553256 FAM229AH3BQW9 127 aa12.33□□□□□ -0.44
PTCH1-227ENST00000553256 INAFM2P0DMQ5 153 aa12.33□□□□□ -0.44
PTCH1-227ENST00000553256 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
PTCH1-227ENST00000553256 CD164L2Q6UWJ8 174 aa12.33□□□□□ -0.44
PTCH1-227ENST00000553256 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
PTCH1-227ENST00000553256 SEC11CQ9BY50 192 aa12.33□□□□□ -0.44
PTCH1-227ENST00000553256 TCAPO15273 167 aa12.32□□□□□ -0.44
PTCH1-227ENST00000553256 XCL1P47992 114 aa12.32□□□□□ -0.44
PTCH1-227ENST00000553256 Q6ZUT4 128 aa12.32□□□□□ -0.44
PTCH1-227ENST00000553256 PRELID3AQ96N28 172 aa12.32□□□□□ -0.44
PTCH1-227ENST00000553256 CFAP161Q6P656 301 aa12.31□□□□□ -0.44
PTCH1-227ENST00000553256 LAMTOR2Q9Y2Q5 125 aa12.31□□□□□ -0.44
PTCH1-227ENST00000553256 HIGD2BQ4VC39 106 aa12.3□□□□□ -0.44
PTCH1-227ENST00000553256 RNASE13Q5GAN3 156 aaKnown RBP12.3□□□□□ -0.44
PTCH1-227ENST00000553256 CTDSP1Q9GZU7 261 aa12.3□□□□□ -0.44
PTCH1-227ENST00000553256 MRPS36P82909 103 aaKnown RBP12.29□□□□□ -0.44
PTCH1-227ENST00000553256 COMMD7Q86VX2 200 aa12.29□□□□□ -0.44
PTCH1-227ENST00000553256 SS18Q15532 418 aa12.28□□□□□ -0.44
PTCH1-227ENST00000553256 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-227ENST00000553256 AP5S1Q9NUS5 200 aa12.28□□□□□ -0.44
PTCH1-227ENST00000553256 IGHV3-64A0A075B6Q5 118 aa12.27□□□□□ -0.45
PTCH1-227ENST00000553256 IGHV1-58A0A0C4DH39 117 aa12.27□□□□□ -0.45
PTCH1-227ENST00000553256 C1orf196B1AJZ1 125 aa12.27□□□□□ -0.45
PTCH1-227ENST00000553256 SMAGPQ0VAQ4 97 aa12.27□□□□□ -0.45
PTCH1-227ENST00000553256 TMEM18Q96B42 140 aa12.27□□□□□ -0.45
PTCH1-227ENST00000553256 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.45
PTCH1-227ENST00000553256 CARHSP1Q9Y2V2 147 aaKnown RBP12.27□□□□□ -0.45
PTCH1-227ENST00000553256 TRAV9-1A0A075B6T8 112 aa12.26□□□□□ -0.45
PTCH1-227ENST00000553256 SPACA4Q8TDM5 124 aa12.26□□□□□ -0.45
PTCH1-227ENST00000553256 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
PTCH1-227ENST00000553256 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-227ENST00000553256 CHTF8P0CG12 524 aa12.25□□□□□ -0.45
PTCH1-227ENST00000553256 Q8N8P6 123 aa12.25□□□□□ -0.45
PTCH1-227ENST00000553256 DMBT1Q9UGM3 2413 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-227ENST00000553256 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
PTCH1-227ENST00000553256 LINC00526Q96FQ7 95 aa12.24□□□□□ -0.45
PTCH1-227ENST00000553256 IGHV3OR16-9A0A0B4J2B5 98 aa12.23□□□□□ -0.45
PTCH1-227ENST00000553256 PLA2G1BP04054 148 aaKnown RBP12.23□□□□□ -0.45
PTCH1-227ENST00000553256 PRSS3P2Q8NHM4 247 aa12.23□□□□□ -0.45
PTCH1-227ENST00000553256 COX6A2Q02221 97 aa12.22□□□□□ -0.45
PTCH1-227ENST00000553256 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
PTCH1-227ENST00000553256 IGLV4-3A0A075B6K6 122 aa12.21□□□□□ -0.45
PTCH1-227ENST00000553256 LOC389332A0A1B0GUA5 103 aa12.21□□□□□ -0.45
PTCH1-227ENST00000553256 PLAC8Q9NZF1 115 aa12.21□□□□□ -0.45
PTCH1-227ENST00000553256 A0A087WYN8 130 aa12.2□□□□□ -0.46
PTCH1-227ENST00000553256 COX7A2LO14548 114 aa12.2□□□□□ -0.46
PTCH1-227ENST00000553256 RAB5AP20339 215 aa12.2□□□□□ -0.46
PTCH1-227ENST00000553256 GNB1LQ9BYB4 327 aa12.19□□□□□ -0.46
PTCH1-227ENST00000553256 IGIPA6NJ69 53 aa12.18□□□□□ -0.46
PTCH1-227ENST00000553256 K7EMI3 77 aa12.18□□□□□ -0.46
PTCH1-227ENST00000553256 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
PTCH1-227ENST00000553256 LINC00173Q6ZV60 143 aa12.18□□□□□ -0.46
PTCH1-227ENST00000553256 C5orf38Q86SI9 138 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms