RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
DDX54-208ENST00000551344 hDV102S1A0JD36 115 aa12.29□□□□□ -0.44
DDX54-208ENST00000551344 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
DDX54-208ENST00000551344 RPL32P62910 135 aaKnown RBP12.29□□□□□ -0.44
DDX54-208ENST00000551344 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
DDX54-208ENST00000551344 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
DDX54-208ENST00000551344 ANAPC16Q96DE5 110 aa12.29□□□□□ -0.44
DDX54-208ENST00000551344 AP5S1Q9NUS5 200 aa12.29□□□□□ -0.44
DDX54-208ENST00000551344 MT-ND4LP03901 98 aa12.28□□□□□ -0.44
DDX54-208ENST00000551344 SMAGPQ0VAQ4 97 aa12.28□□□□□ -0.44
DDX54-208ENST00000551344 SCXQ7RTU7 201 aa12.28□□□□□ -0.44
DDX54-208ENST00000551344 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
DDX54-208ENST00000551344 TCAPO15273 167 aa12.27□□□□□ -0.45
DDX54-208ENST00000551344 PPBPP02775 128 aa12.27□□□□□ -0.45
DDX54-208ENST00000551344 CSDC2Q9Y534 153 aaKnown RBP12.27□□□□□ -0.45
DDX54-208ENST00000551344 TNFRSF6BO95407 300 aa12.26□□□□□ -0.45
DDX54-208ENST00000551344 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
DDX54-208ENST00000551344 CIRBP-AS1Q8TBR5 109 aa12.26□□□□□ -0.45
DDX54-208ENST00000551344 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
DDX54-208ENST00000551344 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
DDX54-208ENST00000551344 D6R8Y8 96 aa12.25□□□□□ -0.45
DDX54-208ENST00000551344 PHOX2AO14813 284 aa12.25□□□□□ -0.45
DDX54-208ENST00000551344 SDIM1Q6ZPB5 146 aa12.25□□□□□ -0.45
DDX54-208ENST00000551344 TMEM18Q96B42 140 aa12.25□□□□□ -0.45
DDX54-208ENST00000551344 PLA2G1BP04054 148 aaKnown RBP12.24□□□□□ -0.45
DDX54-208ENST00000551344 IFITM2Q01629 132 aa12.24□□□□□ -0.45
DDX54-208ENST00000551344 SS18Q15532 418 aa12.24□□□□□ -0.45
DDX54-208ENST00000551344 LINC00528Q8N1L1 170 aa12.24□□□□□ -0.45
DDX54-208ENST00000551344 C15orf56Q8N910 161 aa12.24□□□□□ -0.45
DDX54-208ENST00000551344 SLPIP03973 132 aa12.23□□□□□ -0.45
DDX54-208ENST00000551344 FOXI1Q12951 378 aa12.23□□□□□ -0.45
DDX54-208ENST00000551344 UQCC3Q6UW78 93 aa12.23□□□□□ -0.45
DDX54-208ENST00000551344 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
DDX54-208ENST00000551344 CCL25O15444 150 aa12.22□□□□□ -0.45
DDX54-208ENST00000551344 XCL1P47992 114 aa12.22□□□□□ -0.45
DDX54-208ENST00000551344 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
DDX54-208ENST00000551344 ORMDL3Q8N138 153 aa12.22□□□□□ -0.45
DDX54-208ENST00000551344 TIMM21Q9BVV7 248 aa12.22□□□□□ -0.45
DDX54-208ENST00000551344 SMIM2Q9BVW6 85 aa12.22□□□□□ -0.45
DDX54-208ENST00000551344 NPYP01303 97 aa12.21□□□□□ -0.45
DDX54-208ENST00000551344 SRRM2Q9UQ35 2752 aaKnown RBP12.21□□□□□ -0.46
DDX54-208ENST00000551344 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
DDX54-208ENST00000551344 CD164L2Q6UWJ8 174 aa12.2□□□□□ -0.46
DDX54-208ENST00000551344 VPS13BQ7Z7G8 4022 aa12.2□□□□□ -0.46
DDX54-208ENST00000551344 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
DDX54-208ENST00000551344 TMEM218A2RU14 115 aa12.19□□□□□ -0.46
DDX54-208ENST00000551344 C1orf196B1AJZ1 125 aa12.19□□□□□ -0.46
DDX54-208ENST00000551344 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
DDX54-208ENST00000551344 HIGD2BQ4VC39 106 aa12.18□□□□□ -0.46
DDX54-208ENST00000551344 IMMP2LQ96T52 175 aa12.18□□□□□ -0.46
DDX54-208ENST00000551344 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
DDX54-208ENST00000551344 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
DDX54-208ENST00000551344 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
DDX54-208ENST00000551344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.17□□□□□ -0.46
DDX54-208ENST00000551344 RAB5AP20339 215 aa12.16□□□□□ -0.46
DDX54-208ENST00000551344 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
DDX54-208ENST00000551344 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
DDX54-208ENST00000551344 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
DDX54-208ENST00000551344 CTDSP1Q9GZU7 261 aa12.15□□□□□ -0.46
DDX54-208ENST00000551344 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
DDX54-208ENST00000551344 FLG2Q5D862 2391 aaPredicted RBP12.15□□□□□ -0.46
DDX54-208ENST00000551344 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
DDX54-208ENST00000551344 PANO1I0J062 215 aa12.14□□□□□ -0.47
DDX54-208ENST00000551344 RNASE13Q5GAN3 156 aaKnown RBP12.14□□□□□ -0.47
DDX54-208ENST00000551344 DPH3Q96FX2 82 aa12.14□□□□□ -0.47
DDX54-208ENST00000551344 SEC11CQ9BY50 192 aa12.14□□□□□ -0.47
DDX54-208ENST00000551344 MRPS36P82909 103 aaKnown RBP12.13□□□□□ -0.47
DDX54-208ENST00000551344 Q6ZUT4 128 aa12.13□□□□□ -0.47
DDX54-208ENST00000551344 ZNF561-AS1K7EIQ3 104 aa12.12□□□□□ -0.47
DDX54-208ENST00000551344 COX7A2LO14548 114 aa12.12□□□□□ -0.47
DDX54-208ENST00000551344 MAP1LC3AQ9H492 121 aa12.12□□□□□ -0.47
DDX54-208ENST00000551344 MALP21145 153 aa12.11□□□□□ -0.47
DDX54-208ENST00000551344 COX6A2Q02221 97 aa12.11□□□□□ -0.47
DDX54-208ENST00000551344 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
DDX54-208ENST00000551344 TRAV9-1A0A075B6T8 112 aa12.1□□□□□ -0.47
DDX54-208ENST00000551344 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
DDX54-208ENST00000551344 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
DDX54-208ENST00000551344 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
DDX54-208ENST00000551344 COMMD7Q86VX2 200 aa12.09□□□□□ -0.47
DDX54-208ENST00000551344 Q8N8P6 123 aa12.09□□□□□ -0.47
DDX54-208ENST00000551344 PRSS3P2Q8NHM4 247 aa12.09□□□□□ -0.47
DDX54-208ENST00000551344 SPACA4Q8TDM5 124 aa12.09□□□□□ -0.47
DDX54-208ENST00000551344 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
DDX54-208ENST00000551344 A0A087WYN8 130 aa12.08□□□□□ -0.48
DDX54-208ENST00000551344 CHTF8P0CG12 524 aa12.08□□□□□ -0.48
DDX54-208ENST00000551344 IFI27P40305 119 aaPredicted RBP12.08□□□□□ -0.48
DDX54-208ENST00000551344 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
DDX54-208ENST00000551344 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
DDX54-208ENST00000551344 K7EMI3 77 aa12.07□□□□□ -0.48
DDX54-208ENST00000551344 APOMO95445 188 aa12.07□□□□□ -0.48
DDX54-208ENST00000551344 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
DDX54-208ENST00000551344 SYCNQ0VAF6 134 aa12.07□□□□□ -0.48
DDX54-208ENST00000551344 C5orf38Q86SI9 138 aa12.07□□□□□ -0.48
DDX54-208ENST00000551344 CARD19Q96LW7 228 aa12.07□□□□□ -0.48
DDX54-208ENST00000551344 PLAC8Q9NZF1 115 aa12.06□□□□□ -0.48
DDX54-208ENST00000551344 DMBT1Q9UGM3 2413 aaPredicted RBP12.06□□□□□ -0.48
DDX54-208ENST00000551344 S100PP25815 95 aa12.05□□□□□ -0.48
DDX54-208ENST00000551344 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
DDX54-208ENST00000551344 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
DDX54-208ENST00000551344 NXT2Q9NPJ8 142 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms