RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SPINK6Q6UWN8 80 aa13.5□□□□□ -0.25
SMARCC2-210ENST00000550519 CARD19Q96LW7 228 aa13.5□□□□□ -0.25
SMARCC2-210ENST00000550519 TMEM250H0YL14 139 aa13.49□□□□□ -0.25
SMARCC2-210ENST00000550519 KRTAP10-8P60410 259 aa13.49□□□□□ -0.25
SMARCC2-210ENST00000550519 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
SMARCC2-210ENST00000550519 TCTE3Q8IZS6 198 aa13.49□□□□□ -0.25
SMARCC2-210ENST00000550519 SRSF9Q13242 221 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCC2-210ENST00000550519 CD164L2Q6UWJ8 174 aa13.48□□□□□ -0.25
SMARCC2-210ENST00000550519 MRAP2Q96G30 205 aa13.48□□□□□ -0.25
SMARCC2-210ENST00000550519 ST20Q9HBF5 79 aa13.48□□□□□ -0.25
SMARCC2-210ENST00000550519 CDC42SE2Q9NRR3 84 aa13.48□□□□□ -0.25
SMARCC2-210ENST00000550519 TMEM242Q9NWH2 141 aa13.48□□□□□ -0.25
SMARCC2-210ENST00000550519 POLR2KP53803 58 aaKnown RBP13.47□□□□□ -0.25
SMARCC2-210ENST00000550519 SS18Q15532 418 aa13.47□□□□□ -0.25
SMARCC2-210ENST00000550519 CT83Q5H943 113 aa13.47□□□□□ -0.25
SMARCC2-210ENST00000550519 SYCNQ0VAF6 134 aa13.46□□□□□ -0.25
SMARCC2-210ENST00000550519 REG3GQ6UW15 175 aa13.46□□□□□ -0.25
SMARCC2-210ENST00000550519 TRBV27A0A0K0K1C4 114 aa13.45□□□□□ -0.26
SMARCC2-210ENST00000550519 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
SMARCC2-210ENST00000550519 Q6ZRP5 223 aa13.45□□□□□ -0.26
SMARCC2-210ENST00000550519 ZNF664Q8N3J9 261 aa13.45□□□□□ -0.26
SMARCC2-210ENST00000550519 TMEM191AQ9H0A3 160 aa13.45□□□□□ -0.26
SMARCC2-210ENST00000550519 PTTG1IPP53801 180 aa13.43□□□□□ -0.26
SMARCC2-210ENST00000550519 BORCS7Q96B45 105 aa13.43□□□□□ -0.26
SMARCC2-210ENST00000550519 A0A1B0GUT8 65 aa13.42□□□□□ -0.26
SMARCC2-210ENST00000550519 C7orf77A4D0Y5 90 aa13.42□□□□□ -0.26
SMARCC2-210ENST00000550519 RAB4AP20338 218 aa13.42□□□□□ -0.26
SMARCC2-210ENST00000550519 CAMPP49913 170 aa13.42□□□□□ -0.26
SMARCC2-210ENST00000550519 HIGD1CA8MV81 97 aa13.41□□□□□ -0.26
SMARCC2-210ENST00000550519 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
SMARCC2-210ENST00000550519 BLOC1S1P78537 153 aa13.4□□□□□ -0.26
SMARCC2-210ENST00000550519 ISOC2Q96AB3 205 aa13.4□□□□□ -0.26
SMARCC2-210ENST00000550519 IGLV4-69A0A075B6H9 119 aa13.39□□□□□ -0.27
SMARCC2-210ENST00000550519 LOC107984640A0A0U1RRK4 108 aa13.39□□□□□ -0.27
SMARCC2-210ENST00000550519 C1orf196B1AJZ1 125 aa13.39□□□□□ -0.27
SMARCC2-210ENST00000550519 AMN1Q8IY45 258 aa13.39□□□□□ -0.27
SMARCC2-210ENST00000550519 CSDC2Q9Y534 153 aaKnown RBP13.39□□□□□ -0.27
SMARCC2-210ENST00000550519 CEBPGP53567 150 aa13.38□□□□□ -0.27
SMARCC2-210ENST00000550519 GAGE2BQ13066 116 aa13.38□□□□□ -0.27
SMARCC2-210ENST00000550519 LINC01551Q86U37 167 aa13.38□□□□□ -0.27
SMARCC2-210ENST00000550519 A0A1W2PNN7 141 aa13.37□□□□□ -0.27
SMARCC2-210ENST00000550519 COX7A2LO14548 114 aa13.37□□□□□ -0.27
SMARCC2-210ENST00000550519 VCYO14598 125 aa13.37□□□□□ -0.27
SMARCC2-210ENST00000550519 ALKAL2Q6UX46 152 aa13.37□□□□□ -0.27
SMARCC2-210ENST00000550519 NUP35Q8NFH5 326 aa13.37□□□□□ -0.27
SMARCC2-210ENST00000550519 MALP21145 153 aa13.36□□□□□ -0.27
SMARCC2-210ENST00000550519 SMIM7Q9BQ49 75 aa13.36□□□□□ -0.27
SMARCC2-210ENST00000550519 OSTCQ9NRP0 149 aa13.36□□□□□ -0.27
SMARCC2-210ENST00000550519 UBE2D4Q9Y2X8 147 aa13.36□□□□□ -0.27
SMARCC2-210ENST00000550519 SMKR1H3BMG3 65 aa13.35□□□□□ -0.27
SMARCC2-210ENST00000550519 FCER1GP30273 86 aa13.35□□□□□ -0.27
SMARCC2-210ENST00000550519 CAMK2N2Q96S95 79 aa13.35□□□□□ -0.27
SMARCC2-210ENST00000550519 APOMO95445 188 aa13.34□□□□□ -0.27
SMARCC2-210ENST00000550519 NRACQ8N912 160 aa13.34□□□□□ -0.27
SMARCC2-210ENST00000550519 C2orf48Q96LS8 159 aa13.34□□□□□ -0.27
SMARCC2-210ENST00000550519 PPP1R17O96001 155 aa13.33□□□□□ -0.28
SMARCC2-210ENST00000550519 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.28
SMARCC2-210ENST00000550519 SMAGPQ0VAQ4 97 aa13.33□□□□□ -0.28
SMARCC2-210ENST00000550519 RNASE13Q5GAN3 156 aaKnown RBP13.33□□□□□ -0.28
SMARCC2-210ENST00000550519 TRAV13-1A0A0B4J241 112 aa13.32□□□□□ -0.28
SMARCC2-210ENST00000550519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.32□□□□□ -0.28
SMARCC2-210ENST00000550519 RIGQ13278 110 aa13.32□□□□□ -0.28
SMARCC2-210ENST00000550519 C9orf116Q5BN46 136 aaPredicted RBP13.32□□□□□ -0.28
SMARCC2-210ENST00000550519 KIR2DL4Q99706 377 aa13.32□□□□□ -0.28
SMARCC2-210ENST00000550519 C5orf38Q86SI9 138 aa13.31□□□□□ -0.28
SMARCC2-210ENST00000550519 EIF5A2Q9GZV4 153 aaKnown RBP13.31□□□□□ -0.28
SMARCC2-210ENST00000550519 PSORS1C2Q9UIG4 136 aa13.31□□□□□ -0.28
SMARCC2-210ENST00000550519 V9GYV3 84 aa13.31□□□□□ -0.28
SMARCC2-210ENST00000550519 ZNF727A8MUV8 499 aa13.3□□□□□ -0.28
SMARCC2-210ENST00000550519 TIMM21Q9BVV7 248 aa13.3□□□□□ -0.28
SMARCC2-210ENST00000550519 Q6ZUT4 128 aa13.29□□□□□ -0.28
SMARCC2-210ENST00000550519 PPP1R2P9O14990 202 aa13.28□□□□□ -0.28
SMARCC2-210ENST00000550519 SRP19P09132 144 aaKnown RBP13.28□□□□□ -0.28
SMARCC2-210ENST00000550519 RNF151Q2KHN1 245 aa13.28□□□□□ -0.28
SMARCC2-210ENST00000550519 MT-ND6P03923 174 aa13.27□□□□□ -0.29
SMARCC2-210ENST00000550519 RPL18AQ02543 176 aaKnown RBP13.27□□□□□ -0.29
SMARCC2-210ENST00000550519 SPAG11BQ08648 103 aa13.27□□□□□ -0.29
SMARCC2-210ENST00000550519 OPRPNQ99935 248 aaPredicted RBP13.27□□□□□ -0.29
SMARCC2-210ENST00000550519 MRPL51Q4U2R6 128 aaKnown RBP13.26□□□□□ -0.29
SMARCC2-210ENST00000550519 FAM104BQ5XKR9 115 aa13.26□□□□□ -0.29
SMARCC2-210ENST00000550519 PHF5AQ7RTV0 110 aaKnown RBP13.26□□□□□ -0.29
SMARCC2-210ENST00000550519 TMEM18Q96B42 140 aa13.26□□□□□ -0.29
SMARCC2-210ENST00000550519 OR10D4PQ8NGN7 298 aa13.25□□□□□ -0.29
SMARCC2-210ENST00000550519 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
SMARCC2-210ENST00000550519 RPL32P62910 135 aaKnown RBP13.24□□□□□ -0.29
SMARCC2-210ENST00000550519 C1orf137Q5JT78 98 aa13.24□□□□□ -0.29
SMARCC2-210ENST00000550519 AKAP14Q86UN6 197 aa13.24□□□□□ -0.29
SMARCC2-210ENST00000550519 FAM104AQ969W3 186 aa13.24□□□□□ -0.29
SMARCC2-210ENST00000550519 C20orf78Q9BR46 151 aa13.24□□□□□ -0.29
SMARCC2-210ENST00000550519 TRBV24-1A0A075B6N3 115 aa13.23□□□□□ -0.29
SMARCC2-210ENST00000550519 LINC00862A6NCI5 91 aa13.23□□□□□ -0.29
SMARCC2-210ENST00000550519 MRPL35Q9NZE8 188 aaKnown RBP13.23□□□□□ -0.29
SMARCC2-210ENST00000550519 IGHV3OR16-9A0A0B4J2B5 98 aa13.22□□□□□ -0.29
SMARCC2-210ENST00000550519 F8WDY8 70 aa13.22□□□□□ -0.29
SMARCC2-210ENST00000550519 RPL39P62891 51 aaKnown RBP13.22□□□□□ -0.29
SMARCC2-210ENST00000550519 TCAPO15273 167 aa13.21□□□□□ -0.29
SMARCC2-210ENST00000550519 TMEM241Q24JQ0 296 aa13.21□□□□□ -0.29
SMARCC2-210ENST00000550519 FAM74A3Q4VXF1 159 aa13.21□□□□□ -0.29
SMARCC2-210ENST00000550519 SMIM27A0A1W2PRY6 76 aa13.2□□□□□ -0.3
SMARCC2-210ENST00000550519 RPL23P62829 140 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms