RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 D6R8Y8 96 aa11.19□□□□□ -0.62
CHMP1A-208ENST00000550102 TNFRSF6BO95407 300 aa11.19□□□□□ -0.62
CHMP1A-208ENST00000550102 PPBPP02775 128 aa11.19□□□□□ -0.62
CHMP1A-208ENST00000550102 RPL32P62910 135 aaKnown RBP11.19□□□□□ -0.62
CHMP1A-208ENST00000550102 SMAGPQ0VAQ4 97 aa11.19□□□□□ -0.62
CHMP1A-208ENST00000550102 CHCHD10Q8WYQ3 142 aaPredicted RBP11.19□□□□□ -0.62
CHMP1A-208ENST00000550102 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
CHMP1A-208ENST00000550102 TCAPO15273 167 aa11.18□□□□□ -0.62
CHMP1A-208ENST00000550102 SMIM2Q9BVW6 85 aa11.18□□□□□ -0.62
CHMP1A-208ENST00000550102 PHOX2AO14813 284 aa11.17□□□□□ -0.62
CHMP1A-208ENST00000550102 CNBPP62633 177 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-208ENST00000550102 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
CHMP1A-208ENST00000550102 ORMDL3Q8N138 153 aa11.17□□□□□ -0.62
CHMP1A-208ENST00000550102 AP5S1Q9NUS5 200 aa11.17□□□□□ -0.62
CHMP1A-208ENST00000550102 NPYP01303 97 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 ZNF664Q8N3J9 261 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 C15orf56Q8N910 161 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 C9orf163Q8N9P6 203 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 TMEM18Q96B42 140 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 CDC42SE2Q9NRR3 84 aa11.16□□□□□ -0.62
CHMP1A-208ENST00000550102 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
CHMP1A-208ENST00000550102 ADCYAP1P18509 176 aa11.15□□□□□ -0.62
CHMP1A-208ENST00000550102 XCL1P47992 114 aa11.15□□□□□ -0.62
CHMP1A-208ENST00000550102 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
CHMP1A-208ENST00000550102 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
CHMP1A-208ENST00000550102 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.14□□□□□ -0.63
CHMP1A-208ENST00000550102 TMEM218A2RU14 115 aa11.14□□□□□ -0.63
CHMP1A-208ENST00000550102 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
CHMP1A-208ENST00000550102 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
CHMP1A-208ENST00000550102 UBE2D4Q9Y2X8 147 aa11.14□□□□□ -0.63
CHMP1A-208ENST00000550102 VPS13BQ7Z7G8 4022 aa11.13□□□□□ -0.63
CHMP1A-208ENST00000550102 CCL25O15444 150 aa11.13□□□□□ -0.63
CHMP1A-208ENST00000550102 FOXI1Q12951 378 aa11.13□□□□□ -0.63
CHMP1A-208ENST00000550102 SS18Q15532 418 aa11.13□□□□□ -0.63
CHMP1A-208ENST00000550102 COMMD7Q86VX2 200 aa11.13□□□□□ -0.63
CHMP1A-208ENST00000550102 TMEM136Q6ZRR5 245 aa11.12□□□□□ -0.63
CHMP1A-208ENST00000550102 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
CHMP1A-208ENST00000550102 LAMTOR2Q9Y2Q5 125 aa11.12□□□□□ -0.63
CHMP1A-208ENST00000550102 FAT1Q14517 4588 aa11.11□□□□□ -0.63
CHMP1A-208ENST00000550102 GVQW2A0A096LPI5 108 aaPredicted RBP11.11□□□□□ -0.63
CHMP1A-208ENST00000550102 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
CHMP1A-208ENST00000550102 Q6ZUT4 128 aa11.11□□□□□ -0.63
CHMP1A-208ENST00000550102 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
CHMP1A-208ENST00000550102 SEC11CQ9BY50 192 aa11.11□□□□□ -0.63
CHMP1A-208ENST00000550102 IGHV3-64A0A075B6Q5 118 aa11.1□□□□□ -0.63
CHMP1A-208ENST00000550102 INAFM2P0DMQ5 153 aa11.1□□□□□ -0.63
CHMP1A-208ENST00000550102 CD164L2Q6UWJ8 174 aa11.1□□□□□ -0.63
CHMP1A-208ENST00000550102 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
CHMP1A-208ENST00000550102 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
CHMP1A-208ENST00000550102 SPANXA1Q9NS26 97 aa11.1□□□□□ -0.63
CHMP1A-208ENST00000550102 PLA2G1BP04054 148 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-208ENST00000550102 RAB5AP20339 215 aa11.09□□□□□ -0.63
CHMP1A-208ENST00000550102 RPL39P62891 51 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-208ENST00000550102 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-208ENST00000550102 SDIM1Q6ZPB5 146 aa11.09□□□□□ -0.63
CHMP1A-208ENST00000550102 MAP1LC3AQ9H492 121 aa11.09□□□□□ -0.63
CHMP1A-208ENST00000550102 IGHV1-58A0A0C4DH39 117 aa11.08□□□□□ -0.64
CHMP1A-208ENST00000550102 C1orf196B1AJZ1 125 aa11.08□□□□□ -0.64
CHMP1A-208ENST00000550102 SLPIP03973 132 aa11.08□□□□□ -0.64
CHMP1A-208ENST00000550102 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
CHMP1A-208ENST00000550102 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.07□□□□□ -0.64
CHMP1A-208ENST00000550102 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
CHMP1A-208ENST00000550102 TRAV13-1A0A0B4J241 112 aa11.06□□□□□ -0.64
CHMP1A-208ENST00000550102 PRSS47A8MTI9 375 aa11.05□□□□□ -0.64
CHMP1A-208ENST00000550102 COX7A2LO14548 114 aa11.05□□□□□ -0.64
CHMP1A-208ENST00000550102 S100PP25815 95 aa11.05□□□□□ -0.64
CHMP1A-208ENST00000550102 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
CHMP1A-208ENST00000550102 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
CHMP1A-208ENST00000550102 LOC389332A0A1B0GUA5 103 aa11.04□□□□□ -0.64
CHMP1A-208ENST00000550102 CIRBPQ14011 172 aaKnown RBP11.04□□□□□ -0.64
CHMP1A-208ENST00000550102 PANO1I0J062 215 aa11.03□□□□□ -0.64
CHMP1A-208ENST00000550102 MALP21145 153 aa11.03□□□□□ -0.64
CHMP1A-208ENST00000550102 IFI27P40305 119 aaPredicted RBP11.03□□□□□ -0.64
CHMP1A-208ENST00000550102 Q8N8P6 123 aa11.03□□□□□ -0.64
CHMP1A-208ENST00000550102 CARHSP1Q9Y2V2 147 aaKnown RBP11.03□□□□□ -0.64
CHMP1A-208ENST00000550102 IFITM10A6NMD0 228 aa11.02□□□□□ -0.65
CHMP1A-208ENST00000550102 ZNF561-AS1K7EIQ3 104 aa11.02□□□□□ -0.65
CHMP1A-208ENST00000550102 RHEBQ15382 184 aa11.02□□□□□ -0.65
CHMP1A-208ENST00000550102 C10orf91Q5T1B1 145 aa11.02□□□□□ -0.65
CHMP1A-208ENST00000550102 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.65
CHMP1A-208ENST00000550102 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 SPACA4Q8TDM5 124 aa11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 FAM104AQ969W3 186 aa11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 LINC00526Q96FQ7 95 aa11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 CARD19Q96LW7 228 aa11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 OPRPNQ99935 248 aaPredicted RBP11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 NXT2Q9NPJ8 142 aaKnown RBP11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 PYGO1Q9Y3Y4 419 aa11.01□□□□□ -0.65
CHMP1A-208ENST00000550102 K7EMI3 77 aa11□□□□□ -0.65
CHMP1A-208ENST00000550102 COX6A2Q02221 97 aa11□□□□□ -0.65
CHMP1A-208ENST00000550102 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
CHMP1A-208ENST00000550102 CYSLTR1Q9Y271 337 aa11□□□□□ -0.65
CHMP1A-208ENST00000550102 APOMO95445 188 aa10.99□□□□□ -0.65
CHMP1A-208ENST00000550102 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
CHMP1A-208ENST00000550102 SYCNQ0VAF6 134 aa10.98□□□□□ -0.65
CHMP1A-208ENST00000550102 C2orf66Q6UXQ4 117 aa10.98□□□□□ -0.65
CHMP1A-208ENST00000550102 C5orf38Q86SI9 138 aa10.98□□□□□ -0.65
CHMP1A-208ENST00000550102 DPH3Q96FX2 82 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms