RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 Q6ZSA8 131 aa10.24□□□□□ -0.77
DDX54-205ENST00000548786 ANAPC16Q96DE5 110 aa10.24□□□□□ -0.77
DDX54-205ENST00000548786 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
DDX54-205ENST00000548786 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
DDX54-205ENST00000548786 COMMD7Q86VX2 200 aa10.23□□□□□ -0.77
DDX54-205ENST00000548786 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
DDX54-205ENST00000548786 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
DDX54-205ENST00000548786 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
DDX54-205ENST00000548786 DGAT2L7PQ6IED9 249 aa10.22□□□□□ -0.77
DDX54-205ENST00000548786 UQCC3Q6UW78 93 aa10.22□□□□□ -0.77
DDX54-205ENST00000548786 SCXQ7RTU7 201 aa10.22□□□□□ -0.77
DDX54-205ENST00000548786 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
DDX54-205ENST00000548786 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
DDX54-205ENST00000548786 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
DDX54-205ENST00000548786 LINC00959A0A1B0GUT2 108 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 TCAPO15273 167 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 CCL25O15444 150 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 ORMDL3Q8N138 153 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 ZNF664Q8N3J9 261 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 C15orf56Q8N910 161 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 PRELID3AQ96N28 172 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.77
DDX54-205ENST00000548786 TRBV24-1A0A075B6N3 115 aa10.2□□□□□ -0.78
DDX54-205ENST00000548786 FAM229AH3BQW9 127 aa10.2□□□□□ -0.78
DDX54-205ENST00000548786 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
DDX54-205ENST00000548786 FOXI1Q12951 378 aa10.2□□□□□ -0.78
DDX54-205ENST00000548786 TMEM136Q6ZRR5 245 aa10.2□□□□□ -0.78
DDX54-205ENST00000548786 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
DDX54-205ENST00000548786 UBE2D4Q9Y2X8 147 aa10.2□□□□□ -0.78
DDX54-205ENST00000548786 PPBPP02775 128 aa10.19□□□□□ -0.78
DDX54-205ENST00000548786 SLPIP03973 132 aa10.19□□□□□ -0.78
DDX54-205ENST00000548786 Q6ZUT4 128 aa10.19□□□□□ -0.78
DDX54-205ENST00000548786 LOC389332A0A1B0GUA5 103 aa10.18□□□□□ -0.78
DDX54-205ENST00000548786 SS18Q15532 418 aa10.18□□□□□ -0.78
DDX54-205ENST00000548786 LINC00528Q8N1L1 170 aa10.18□□□□□ -0.78
DDX54-205ENST00000548786 C9orf163Q8N9P6 203 aa10.18□□□□□ -0.78
DDX54-205ENST00000548786 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
DDX54-205ENST00000548786 INAFM2P0DMQ5 153 aa10.17□□□□□ -0.78
DDX54-205ENST00000548786 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
DDX54-205ENST00000548786 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
DDX54-205ENST00000548786 CIRBP-AS1Q8TBR5 109 aa10.17□□□□□ -0.78
DDX54-205ENST00000548786 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
DDX54-205ENST00000548786 PANO1I0J062 215 aa10.16□□□□□ -0.78
DDX54-205ENST00000548786 PHOX2AO14813 284 aa10.16□□□□□ -0.78
DDX54-205ENST00000548786 CNBPP62633 177 aaKnown RBP10.16□□□□□ -0.78
DDX54-205ENST00000548786 TMEM18Q96B42 140 aa10.16□□□□□ -0.78
DDX54-205ENST00000548786 LINC00526Q96FQ7 95 aa10.16□□□□□ -0.78
DDX54-205ENST00000548786 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
DDX54-205ENST00000548786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
DDX54-205ENST00000548786 SMAGPQ0VAQ4 97 aa10.15□□□□□ -0.78
DDX54-205ENST00000548786 SEC11CQ9BY50 192 aa10.15□□□□□ -0.78
DDX54-205ENST00000548786 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
DDX54-205ENST00000548786 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
DDX54-205ENST00000548786 RAB5AP20339 215 aa10.14□□□□□ -0.79
DDX54-205ENST00000548786 SDIM1Q6ZPB5 146 aa10.14□□□□□ -0.79
DDX54-205ENST00000548786 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
DDX54-205ENST00000548786 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
DDX54-205ENST00000548786 GVQW2A0A096LPI5 108 aaPredicted RBP10.13□□□□□ -0.79
DDX54-205ENST00000548786 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
DDX54-205ENST00000548786 CD164L2Q6UWJ8 174 aa10.13□□□□□ -0.79
DDX54-205ENST00000548786 TIMM21Q9BVV7 248 aa10.13□□□□□ -0.79
DDX54-205ENST00000548786 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
DDX54-205ENST00000548786 C1orf196B1AJZ1 125 aa10.12□□□□□ -0.79
DDX54-205ENST00000548786 KIAA1644Q3SXP7 199 aa10.12□□□□□ -0.79
DDX54-205ENST00000548786 IMMP2LQ96T52 175 aa10.12□□□□□ -0.79
DDX54-205ENST00000548786 IGHV1-58A0A0C4DH39 117 aa10.11□□□□□ -0.79
DDX54-205ENST00000548786 MALP21145 153 aa10.11□□□□□ -0.79
DDX54-205ENST00000548786 FAM104AQ969W3 186 aa10.11□□□□□ -0.79
DDX54-205ENST00000548786 DPH3Q96FX2 82 aa10.11□□□□□ -0.79
DDX54-205ENST00000548786 SPANXA1Q9NS26 97 aa10.11□□□□□ -0.79
DDX54-205ENST00000548786 COX7A2LO14548 114 aa10.1□□□□□ -0.79
DDX54-205ENST00000548786 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
DDX54-205ENST00000548786 S100PP25815 95 aa10.1□□□□□ -0.79
DDX54-205ENST00000548786 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
DDX54-205ENST00000548786 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
DDX54-205ENST00000548786 LAMTOR2Q9Y2Q5 125 aa10.1□□□□□ -0.79
DDX54-205ENST00000548786 FLG2Q5D862 2391 aaPredicted RBP10.09□□□□□ -0.79
DDX54-205ENST00000548786 IFITM10A6NMD0 228 aa10.09□□□□□ -0.79
DDX54-205ENST00000548786 COX6A2Q02221 97 aa10.09□□□□□ -0.79
DDX54-205ENST00000548786 Q8N8P6 123 aa10.09□□□□□ -0.79
DDX54-205ENST00000548786 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
DDX54-205ENST00000548786 IGKV2-24A0A0C4DH68 120 aa10.08□□□□□ -0.8
DDX54-205ENST00000548786 ZNF561-AS1K7EIQ3 104 aa10.08□□□□□ -0.8
DDX54-205ENST00000548786 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
DDX54-205ENST00000548786 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
DDX54-205ENST00000548786 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
DDX54-205ENST00000548786 C10orf91Q5T1B1 145 aa10.07□□□□□ -0.8
DDX54-205ENST00000548786 CARD19Q96LW7 228 aa10.07□□□□□ -0.8
DDX54-205ENST00000548786 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
DDX54-205ENST00000548786 IGLV4-3A0A075B6K6 122 aa10.06□□□□□ -0.8
DDX54-205ENST00000548786 TRAV9-1A0A075B6T8 112 aa10.06□□□□□ -0.8
DDX54-205ENST00000548786 MRPS36P82909 103 aaKnown RBP10.06□□□□□ -0.8
DDX54-205ENST00000548786 RHEBQ15382 184 aa10.06□□□□□ -0.8
DDX54-205ENST00000548786 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
DDX54-205ENST00000548786 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
DDX54-205ENST00000548786 MAJINQ3KP22 176 aa10.05□□□□□ -0.8
DDX54-205ENST00000548786 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
DDX54-205ENST00000548786 SPACA4Q8TDM5 124 aa10.05□□□□□ -0.8
DDX54-205ENST00000548786 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms