RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 FGF6P10767 208 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
SCAF11-211ENST00000547950 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 FAM231DQ6ZW35 169 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 LYPD6BQ8NI32 183 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 CHCHD10Q8WYQ3 142 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-211ENST00000547950 SMIM7Q9BQ49 75 aa4.28□□□□□ -1.72
SCAF11-211ENST00000547950 A0A087WYN8 130 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 A0A1B0GUT8 65 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 FAM231BA6NCW3 169 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 H7C423 109 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 XCL1P47992 114 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 COX6A2Q02221 97 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 LINC01551Q86U37 167 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 C15orf56Q8N910 161 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 TSKUQ8WUA8 353 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 TMEM101Q96IK0 257 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 ST20Q9HBF5 79 aa4.27□□□□□ -1.73
SCAF11-211ENST00000547950 IGKV2-24A0A0C4DH68 120 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 TRBV6-5A0A0K0K1A5 114 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 HIGD1CA8MV81 97 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 TSHBP01222 138 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 SRP19P09132 144 aaKnown RBP4.26□□□□□ -1.73
SCAF11-211ENST00000547950 RAB4AP20338 218 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 RPS10P46783 165 aaKnown RBP4.26□□□□□ -1.73
SCAF11-211ENST00000547950 CT83Q5H943 113 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 AMN1Q8IY45 258 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 OR5A1Q8NGJ0 315 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 RNF185Q96GF1 192 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 FAM210AQ96ND0 272 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 TMEM191AQ9H0A3 160 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 TMEM242Q9NWH2 141 aa4.26□□□□□ -1.73
SCAF11-211ENST00000547950 LINC00959A0A1B0GUT2 108 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 SMKR1H3BMG3 65 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 CCL25O15444 150 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 ESDP10768 282 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 ZNF25P17030 456 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-211ENST00000547950 FOXI1Q12951 378 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 RIGQ13278 110 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 CIRBPQ14011 172 aaKnown RBP4.25□□□□□ -1.73
SCAF11-211ENST00000547950 SS18Q15532 418 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 TMEM241Q24JQ0 296 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 MAJINQ3KP22 176 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 ZNF664Q8N3J9 261 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 PRSS3P2Q8NHM4 247 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 MRAP2Q96G30 205 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 OSTCQ9NRP0 149 aa4.25□□□□□ -1.73
SCAF11-211ENST00000547950 GVQW2A0A096LPI5 108 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-211ENST00000547950 A0A1B0GVG6 124 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 VCYO14598 125 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 NDUFS6O75380 124 aaKnown RBP4.24□□□□□ -1.73
SCAF11-211ENST00000547950 FCER1GP30273 86 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 POLR2KP53803 58 aaKnown RBP4.24□□□□□ -1.73
SCAF11-211ENST00000547950 STPG4Q8N801 248 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 NUP35Q8NFH5 326 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 C7orf33Q8WU49 177 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 V9GYV3 84 aa4.24□□□□□ -1.73
SCAF11-211ENST00000547950 IGHV1-58A0A0C4DH39 117 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 TRBV27A0A0K0K1C4 114 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 C7orf77A4D0Y5 90 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 C9JQL5 133 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 PHOX2AO14813 284 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 RPL23P62829 140 aaKnown RBP4.23□□□□□ -1.73
SCAF11-211ENST00000547950 ADIRFQ15847 76 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 Q6ZRU5 148 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 ISOC2Q96AB3 205 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 PLAC8Q9NZF1 115 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
SCAF11-211ENST00000547950 A0A096LNI7 61 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 ZNF561-AS1K7EIQ3 104 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 PPP1R17O96001 155 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 CAMPP49913 170 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 SUMO2P61956 95 aaKnown RBP4.22□□□□□ -1.73
SCAF11-211ENST00000547950 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 PEA15Q15121 130 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 MRPL51Q4U2R6 128 aaKnown RBP4.22□□□□□ -1.73
SCAF11-211ENST00000547950 FAM74A3Q4VXF1 159 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
SCAF11-211ENST00000547950 CD164L2Q6UWJ8 174 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 MRPL52Q86TS9 123 aaKnown RBP4.22□□□□□ -1.73
SCAF11-211ENST00000547950 NRACQ8N912 160 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 KIR2DL4Q99706 377 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 NAT8Q9UHE5 227 aa4.22□□□□□ -1.73
SCAF11-211ENST00000547950 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
SCAF11-211ENST00000547950 TRAV13-1A0A0B4J241 112 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 C1orf196B1AJZ1 125 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 MALP21145 153 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 CKS2P33552 79 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 SMAGPQ0VAQ4 97 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 GAGE2BQ13066 116 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 FAM104BQ5XKR9 115 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 LINC00474Q9P2X8 69 aa4.21□□□□□ -1.74
SCAF11-211ENST00000547950 IGLV4-69A0A075B6H9 119 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms