RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 PPBPP02775 128 aa9.88□□□□□ -0.83
SSH1-204ENST00000546697 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
SSH1-204ENST00000546697 IFITM2Q01629 132 aa9.88□□□□□ -0.83
SSH1-204ENST00000546697 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
SSH1-204ENST00000546697 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
SSH1-204ENST00000546697 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
SSH1-204ENST00000546697 TIMM21Q9BVV7 248 aa9.88□□□□□ -0.83
SSH1-204ENST00000546697 CAMPP49913 170 aa9.87□□□□□ -0.83
SSH1-204ENST00000546697 HAMPP81172 84 aa9.87□□□□□ -0.83
SSH1-204ENST00000546697 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
SSH1-204ENST00000546697 KIR2DL4Q99706 377 aa9.87□□□□□ -0.83
SSH1-204ENST00000546697 PRSS47A8MTI9 375 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 CCL25O15444 150 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 SLPIP03973 132 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 KRTAP10-4P60372 401 aaPredicted RBP9.86□□□□□ -0.83
SSH1-204ENST00000546697 FOXI1Q12951 378 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 RNASEKQ6P5S7 137 aaKnown RBP9.86□□□□□ -0.83
SSH1-204ENST00000546697 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 UQCC3Q6UW78 93 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 TMEM101Q96IK0 257 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 BTF3L4Q96K17 158 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 UBE2D4Q9Y2X8 147 aa9.86□□□□□ -0.83
SSH1-204ENST00000546697 GVQW2A0A096LPI5 108 aaPredicted RBP9.85□□□□□ -0.83
SSH1-204ENST00000546697 LINC00959A0A1B0GUT2 108 aa9.85□□□□□ -0.83
SSH1-204ENST00000546697 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
SSH1-204ENST00000546697 TNFRSF6BO95407 300 aa9.85□□□□□ -0.83
SSH1-204ENST00000546697 CKS2P33552 79 aa9.85□□□□□ -0.83
SSH1-204ENST00000546697 SMAGPQ0VAQ4 97 aa9.85□□□□□ -0.83
SSH1-204ENST00000546697 MRPL54Q6P161 138 aaKnown RBP9.85□□□□□ -0.83
SSH1-204ENST00000546697 ZNF664Q8N3J9 261 aa9.85□□□□□ -0.83
SSH1-204ENST00000546697 PKHD1L1Q86WI1 4243 aa9.84□□□□□ -0.83
SSH1-204ENST00000546697 MT-ND4LP03901 98 aa9.84□□□□□ -0.83
SSH1-204ENST00000546697 INAFM2P0DMQ5 153 aa9.84□□□□□ -0.83
SSH1-204ENST00000546697 SMIM2Q9BVW6 85 aa9.84□□□□□ -0.83
SSH1-204ENST00000546697 hDV102S1A0JD36 115 aa9.83□□□□□ -0.84
SSH1-204ENST00000546697 D6R8Y8 96 aa9.83□□□□□ -0.84
SSH1-204ENST00000546697 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
SSH1-204ENST00000546697 IMMP2LQ96T52 175 aa9.83□□□□□ -0.84
SSH1-204ENST00000546697 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
SSH1-204ENST00000546697 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
SSH1-204ENST00000546697 PLA2G1BP04054 148 aaKnown RBP9.82□□□□□ -0.84
SSH1-204ENST00000546697 FCER1GP30273 86 aa9.82□□□□□ -0.84
SSH1-204ENST00000546697 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
SSH1-204ENST00000546697 ORMDL3Q8N138 153 aa9.82□□□□□ -0.84
SSH1-204ENST00000546697 FAM104AQ969W3 186 aa9.82□□□□□ -0.84
SSH1-204ENST00000546697 NPYP01303 97 aa9.81□□□□□ -0.84
SSH1-204ENST00000546697 ADCYAP1P18509 176 aa9.81□□□□□ -0.84
SSH1-204ENST00000546697 TMEM18Q96B42 140 aa9.81□□□□□ -0.84
SSH1-204ENST00000546697 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
SSH1-204ENST00000546697 FAT3Q8TDW7 4589 aa9.8□□□□□ -0.84
SSH1-204ENST00000546697 IGHV3-64A0A075B6Q5 118 aa9.8□□□□□ -0.84
SSH1-204ENST00000546697 TMEM218A2RU14 115 aa9.8□□□□□ -0.84
SSH1-204ENST00000546697 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
SSH1-204ENST00000546697 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
SSH1-204ENST00000546697 DMBT1Q9UGM3 2413 aaPredicted RBP9.8□□□□□ -0.84
SSH1-204ENST00000546697 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
SSH1-204ENST00000546697 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
SSH1-204ENST00000546697 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
SSH1-204ENST00000546697 C1orf196B1AJZ1 125 aa9.79□□□□□ -0.84
SSH1-204ENST00000546697 PANO1I0J062 215 aa9.79□□□□□ -0.84
SSH1-204ENST00000546697 SS18Q15532 418 aa9.79□□□□□ -0.84
SSH1-204ENST00000546697 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
SSH1-204ENST00000546697 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
SSH1-204ENST00000546697 TRAV9-1A0A075B6T8 112 aa9.78□□□□□ -0.84
SSH1-204ENST00000546697 SEC11CQ9BY50 192 aa9.78□□□□□ -0.84
SSH1-204ENST00000546697 CTDSP1Q9GZU7 261 aa9.78□□□□□ -0.84
SSH1-204ENST00000546697 LRP1Q07954 4544 aaKnown RBP9.77□□□□□ -0.84
SSH1-204ENST00000546697 XCL1P47992 114 aa9.77□□□□□ -0.85
SSH1-204ENST00000546697 C10orf91Q5T1B1 145 aa9.77□□□□□ -0.85
SSH1-204ENST00000546697 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.85
SSH1-204ENST00000546697 PRELID3AQ96N28 172 aa9.77□□□□□ -0.85
SSH1-204ENST00000546697 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
SSH1-204ENST00000546697 K7EMI3 77 aa9.76□□□□□ -0.85
SSH1-204ENST00000546697 Q6ZUT4 128 aa9.76□□□□□ -0.85
SSH1-204ENST00000546697 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
SSH1-204ENST00000546697 HIGD2BQ4VC39 106 aa9.74□□□□□ -0.85
SSH1-204ENST00000546697 PLAC8Q9NZF1 115 aa9.74□□□□□ -0.85
SSH1-204ENST00000546697 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
SSH1-204ENST00000546697 NPSP0C0P6 89 aa9.73□□□□□ -0.85
SSH1-204ENST00000546697 PKIGQ9Y2B9 76 aa9.73□□□□□ -0.85
SSH1-204ENST00000546697 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
SSH1-204ENST00000546697 COX7A2LO14548 114 aa9.72□□□□□ -0.85
SSH1-204ENST00000546697 Q8N8P6 123 aa9.72□□□□□ -0.85
SSH1-204ENST00000546697 CARHSP1Q9Y2V2 147 aaKnown RBP9.72□□□□□ -0.85
SSH1-204ENST00000546697 A0A087WYN8 130 aa9.71□□□□□ -0.86
SSH1-204ENST00000546697 RAB5AP20339 215 aa9.71□□□□□ -0.86
SSH1-204ENST00000546697 COX6A2Q02221 97 aa9.71□□□□□ -0.86
SSH1-204ENST00000546697 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
SSH1-204ENST00000546697 MAP1LC3AQ9H492 121 aa9.71□□□□□ -0.86
SSH1-204ENST00000546697 TRAV13-1A0A0B4J241 112 aa9.7□□□□□ -0.86
SSH1-204ENST00000546697 RNASE13Q5GAN3 156 aaKnown RBP9.7□□□□□ -0.86
SSH1-204ENST00000546697 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
SSH1-204ENST00000546697 F8WDY8 70 aa9.69□□□□□ -0.86
SSH1-204ENST00000546697 CHTF8P0CG12 524 aa9.69□□□□□ -0.86
SSH1-204ENST00000546697 IFI27P40305 119 aaPredicted RBP9.69□□□□□ -0.86
SSH1-204ENST00000546697 OR10D4PQ8NGN7 298 aa9.69□□□□□ -0.86
SSH1-204ENST00000546697 CARD19Q96LW7 228 aa9.69□□□□□ -0.86
SSH1-204ENST00000546697 NXT2Q9NPJ8 142 aaKnown RBP9.69□□□□□ -0.86
SSH1-204ENST00000546697 LINC00474Q9P2X8 69 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms