RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
LTBR-211ENST00000543190 TMEM101Q96IK0 257 aa11.68□□□□□ -0.54
LTBR-211ENST00000543190 ST20Q9HBF5 79 aa11.68□□□□□ -0.54
LTBR-211ENST00000543190 A0A096LNI7 61 aa11.67□□□□□ -0.54
LTBR-211ENST00000543190 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
LTBR-211ENST00000543190 LINC01551Q86U37 167 aa11.67□□□□□ -0.54
LTBR-211ENST00000543190 STPG4Q8N801 248 aa11.67□□□□□ -0.54
LTBR-211ENST00000543190 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
LTBR-211ENST00000543190 HIGD1CA8MV81 97 aa11.66□□□□□ -0.54
LTBR-211ENST00000543190 BORCS7Q96B45 105 aa11.66□□□□□ -0.54
LTBR-211ENST00000543190 PPP1R17O96001 155 aa11.65□□□□□ -0.54
LTBR-211ENST00000543190 RAB4AP20338 218 aa11.65□□□□□ -0.54
LTBR-211ENST00000543190 IGKV2-24A0A0C4DH68 120 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 C7orf77A4D0Y5 90 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 XCL1P47992 114 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 SS18Q15532 418 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 ALKAL2Q6UX46 152 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 ZNF664Q8N3J9 261 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
LTBR-211ENST00000543190 SPINK6Q6UWN8 80 aa11.63□□□□□ -0.55
LTBR-211ENST00000543190 CARD19Q96LW7 228 aa11.63□□□□□ -0.55
LTBR-211ENST00000543190 TMEM242Q9NWH2 141 aa11.63□□□□□ -0.55
LTBR-211ENST00000543190 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
LTBR-211ENST00000543190 SMAGPQ0VAQ4 97 aa11.62□□□□□ -0.55
LTBR-211ENST00000543190 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
LTBR-211ENST00000543190 VCYO14598 125 aa11.61□□□□□ -0.55
LTBR-211ENST00000543190 SYCNQ0VAF6 134 aa11.61□□□□□ -0.55
LTBR-211ENST00000543190 AKAP14Q86UN6 197 aa11.61□□□□□ -0.55
LTBR-211ENST00000543190 A0A0J9YXV3 536 aa11.6□□□□□ -0.55
LTBR-211ENST00000543190 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
LTBR-211ENST00000543190 NRACQ8N912 160 aa11.6□□□□□ -0.55
LTBR-211ENST00000543190 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
LTBR-211ENST00000543190 V9GYV3 84 aa11.6□□□□□ -0.55
LTBR-211ENST00000543190 KRTAP10-8P60410 259 aa11.59□□□□□ -0.55
LTBR-211ENST00000543190 RPL32P62910 135 aaKnown RBP11.59□□□□□ -0.55
LTBR-211ENST00000543190 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
LTBR-211ENST00000543190 ISOC2Q96AB3 205 aa11.59□□□□□ -0.55
LTBR-211ENST00000543190 LRP2P98164 4655 aa11.59□□□□□ -0.55
LTBR-211ENST00000543190 ZNF727A8MUV8 499 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 PPP1R2P9O14990 202 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 CAMPP49913 170 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 PTTG1IPP53801 180 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 SUMO2P61956 95 aaKnown RBP11.58□□□□□ -0.56
LTBR-211ENST00000543190 RIGQ13278 110 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 Q6ZRP5 223 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 NUP35Q8NFH5 326 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 C2orf48Q96LS8 159 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 EIF5A2Q9GZV4 153 aaKnown RBP11.58□□□□□ -0.56
LTBR-211ENST00000543190 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
LTBR-211ENST00000543190 TRBV24-1A0A075B6N3 115 aa11.57□□□□□ -0.56
LTBR-211ENST00000543190 LINC00862A6NCI5 91 aa11.57□□□□□ -0.56
LTBR-211ENST00000543190 SRP19P09132 144 aaKnown RBP11.57□□□□□ -0.56
LTBR-211ENST00000543190 FAM74A3Q4VXF1 159 aa11.57□□□□□ -0.56
LTBR-211ENST00000543190 REG3GQ6UW15 175 aa11.57□□□□□ -0.56
LTBR-211ENST00000543190 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
LTBR-211ENST00000543190 COX7A2LO14548 114 aa11.56□□□□□ -0.56
LTBR-211ENST00000543190 TCAPO15273 167 aa11.56□□□□□ -0.56
LTBR-211ENST00000543190 KIR2DL4Q99706 377 aa11.56□□□□□ -0.56
LTBR-211ENST00000543190 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
LTBR-211ENST00000543190 IGLV4-69A0A075B6H9 119 aa11.55□□□□□ -0.56
LTBR-211ENST00000543190 RNF151Q2KHN1 245 aa11.55□□□□□ -0.56
LTBR-211ENST00000543190 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
LTBR-211ENST00000543190 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
LTBR-211ENST00000543190 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
LTBR-211ENST00000543190 A0A1B0GW15 77 aa11.54□□□□□ -0.56
LTBR-211ENST00000543190 F8WDY8 70 aa11.54□□□□□ -0.56
LTBR-211ENST00000543190 FCER1GP30273 86 aa11.54□□□□□ -0.56
LTBR-211ENST00000543190 CEBPGP53567 150 aa11.54□□□□□ -0.56
LTBR-211ENST00000543190 APOMO95445 188 aa11.53□□□□□ -0.56
LTBR-211ENST00000543190 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
LTBR-211ENST00000543190 SMIM27A0A1W2PRY6 76 aa11.52□□□□□ -0.57
LTBR-211ENST00000543190 MALP21145 153 aa11.52□□□□□ -0.57
LTBR-211ENST00000543190 TMEM241Q24JQ0 296 aa11.52□□□□□ -0.57
LTBR-211ENST00000543190 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
LTBR-211ENST00000543190 OR10D4PQ8NGN7 298 aa11.51□□□□□ -0.57
LTBR-211ENST00000543190 SMKR1H3BMG3 65 aa11.5□□□□□ -0.57
LTBR-211ENST00000543190 RPL23P62829 140 aaKnown RBP11.5□□□□□ -0.57
LTBR-211ENST00000543190 FAM104AQ969W3 186 aa11.5□□□□□ -0.57
LTBR-211ENST00000543190 SMDT1Q9H4I9 107 aa11.5□□□□□ -0.57
LTBR-211ENST00000543190 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.49□□□□□ -0.57
LTBR-211ENST00000543190 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
LTBR-211ENST00000543190 CAMK2N2Q96S95 79 aa11.49□□□□□ -0.57
LTBR-211ENST00000543190 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
LTBR-211ENST00000543190 A0A1W2PNN7 141 aa11.48□□□□□ -0.57
LTBR-211ENST00000543190 SPANXA1Q9NS26 97 aa11.48□□□□□ -0.57
LTBR-211ENST00000543190 MRPL35Q9NZE8 188 aaKnown RBP11.48□□□□□ -0.57
LTBR-211ENST00000543190 NAT8Q9UHE5 227 aa11.48□□□□□ -0.57
LTBR-211ENST00000543190 TRAV13-1A0A0B4J241 112 aa11.47□□□□□ -0.57
LTBR-211ENST00000543190 Q6ZUT4 128 aa11.47□□□□□ -0.57
LTBR-211ENST00000543190 TLX1NBP0CAT3 122 aa11.46□□□□□ -0.57
LTBR-211ENST00000543190 GAGE2BQ13066 116 aa11.46□□□□□ -0.57
LTBR-211ENST00000543190 TNFRSF6BO95407 300 aa11.45□□□□□ -0.58
LTBR-211ENST00000543190 PPBPP02775 128 aa11.45□□□□□ -0.58
LTBR-211ENST00000543190 S100A8P05109 93 aa11.45□□□□□ -0.58
LTBR-211ENST00000543190 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
LTBR-211ENST00000543190 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
LTBR-211ENST00000543190 A0A1B0GXF2 115 aa11.44□□□□□ -0.58
LTBR-211ENST00000543190 CKS2P33552 79 aa11.44□□□□□ -0.58
LTBR-211ENST00000543190 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms