RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 RPL28P46779 137 aaKnown RBP4.13□□□□□ -1.75
XRCC4-206ENST00000542685 POLR2KP53803 58 aaKnown RBP4.13□□□□□ -1.75
XRCC4-206ENST00000542685 LEAP2Q969E1 77 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 UBL5Q9BZL1 73 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 LINC00846Q9NV44 126 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 CTSZQ9UBR2 303 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 C22orf24Q9Y442 160 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 DNAJC13O75165 2243 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 TNCP24821 2201 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 C5orf42Q9H799 3197 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 A0A087WVE0 104 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 NDUFA1O15239 70 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 IGLV1-47P01700 117 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 TRBV12-3P01733 135 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 IGHV3-30-3P0DP02 117 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 RNASE4P34096 147 aaKnown RBP4.12□□□□□ -1.75
XRCC4-206ENST00000542685 C10orf55Q5SWW7 151 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 Q6ZVQ6 151 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 NDUFA12Q9UI09 145 aa4.12□□□□□ -1.75
XRCC4-206ENST00000542685 IGKV2-40A0A087WW87 121 aaPredicted RBP4.11□□□□□ -1.75
XRCC4-206ENST00000542685 E7EQL1 145 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 K7EIM0 57 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 UBE2L6O14933 153 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 IGKV2D-40P01614 121 aaPredicted RBP4.11□□□□□ -1.75
XRCC4-206ENST00000542685 IGF1P05019 195 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 IGHV1-8P0DP01 117 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 CXCL6P80162 114 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 CNEP1R1Q8N9A8 125 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 RBM12B-AS1Q9P1G2 102 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 DNAH14Q0VDD8 3507 aa4.11□□□□□ -1.75
XRCC4-206ENST00000542685 TRBV7-4A0A0J9YYF1 115 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 A0A1W2PNU3 283 aaPredicted RBP4.1□□□□□ -1.75
XRCC4-206ENST00000542685 F6UB75 175 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 H3BQ85 93 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 APOC4P55056 127 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 SS18Q15532 418 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
XRCC4-206ENST00000542685 GPHB5Q86YW7 130 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 LY6G5BQ8NDX9 201 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 NPBQ8NG41 125 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 LINC00474Q9P2X8 69 aa4.1□□□□□ -1.75
XRCC4-206ENST00000542685 TRAV23DV6A0A075B6W5 121 aa4.09□□□□□ -1.75
XRCC4-206ENST00000542685 IGHV1-3A0A0C4DH29 117 aa4.09□□□□□ -1.75
XRCC4-206ENST00000542685 CCL3L1P16619 93 aa4.09□□□□□ -1.75
XRCC4-206ENST00000542685 PDE6GP18545 87 aa4.09□□□□□ -1.75
XRCC4-206ENST00000542685 TMEM105Q8N8V8 129 aa4.09□□□□□ -1.75
XRCC4-206ENST00000542685 LINC00308Q8TCZ7 52 aa4.09□□□□□ -1.75
XRCC4-206ENST00000542685 PHLDA3Q9Y5J5 127 aa4.09□□□□□ -1.75
XRCC4-206ENST00000542685 REV3LO60673 3130 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 IGLV11-55A0A075B6I3 123 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 IGLV9-49A0A0B4J1Y8 123 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 TRAV21A0A0B4J279 112 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 BUB1B-PAK6H3BSN5 160 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 ECSCRQ19T08 205 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 C15orf32Q32M92 178 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 HCP5Q6MZN7 132 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 IGFL3Q6UXB1 125 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 Q8TAT8 98 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 LINC01560Q8TB33 94 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 UBE2E2Q96LR5 201 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 LINC00167Q96N53 147 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 C14orf132Q9NPU4 83 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 ZNRD1Q9P1U0 126 aa4.08□□□□□ -1.76
XRCC4-206ENST00000542685 MED13Q9UHV7 2174 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 TRAV12-3A0A0B4J271 114 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 IGHV4-59P01825 116 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 CRPP02741 224 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 FUSP35637 526 aaKnown RBP eCLIP4.07□□□□□ -1.76
XRCC4-206ENST00000542685 UBE2AP49459 152 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 C6orf223Q8N319 242 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 RPL39LQ96EH5 51 aaKnown RBP4.07□□□□□ -1.76
XRCC4-206ENST00000542685 ORMDL1Q9P0S3 153 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 LINC00588Q9Y4M8 146 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 NAV3Q8IVL0 2385 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 LAMA3Q16787 3333 aa4.07□□□□□ -1.76
XRCC4-206ENST00000542685 IGLV7-46A0A075B6I9 117 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 IGLV4-3A0A075B6K6 122 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 M0R378 163 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 IGHV3-48P01763 117 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 MGPP08493 103 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 S100A4P26447 101 aaKnown RBP4.06□□□□□ -1.76
XRCC4-206ENST00000542685 ENHOQ6UWT2 76 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 TMEM254Q8TBM7 123 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 RMI2Q96E14 147 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 ARRDC1-AS1Q9H2J1 176 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 FAM215AQ9Y5M1 114 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 KIF25-AS1Q9Y6Z4 181 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 SZT2Q5T011 3432 aa4.06□□□□□ -1.76
XRCC4-206ENST00000542685 LOC110117498A0A087WWA1 95 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 hDV103S1A0JD37 113 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 CTSGP08311 255 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 FAM19A3Q7Z5A8 133 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 DEFB108BQ8NET1 73 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms