RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 TMEM218A2RU14 115 aa8.06□□□□□ -1.12
SCARB1-207ENST00000541661 FAM231BA6NCW3 169 aa8.06□□□□□ -1.12
SCARB1-207ENST00000541661 PDE6DO43924 150 aa8.06□□□□□ -1.12
SCARB1-207ENST00000541661 XCL1P47992 114 aa8.06□□□□□ -1.12
SCARB1-207ENST00000541661 MEF2BQ02080 365 aaPredicted RBP8.06□□□□□ -1.12
SCARB1-207ENST00000541661 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
SCARB1-207ENST00000541661 SDHAF1A6NFY7 115 aa8.05□□□□□ -1.12
SCARB1-207ENST00000541661 CCL25O15444 150 aa8.05□□□□□ -1.12
SCARB1-207ENST00000541661 SYCNQ0VAF6 134 aa8.05□□□□□ -1.12
SCARB1-207ENST00000541661 TMEM101Q96IK0 257 aa8.05□□□□□ -1.12
SCARB1-207ENST00000541661 I3L3M4 83 aa8.04□□□□□ -1.12
SCARB1-207ENST00000541661 ESDP10768 282 aa8.04□□□□□ -1.12
SCARB1-207ENST00000541661 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
SCARB1-207ENST00000541661 BTF3L4Q96K17 158 aa8.04□□□□□ -1.12
SCARB1-207ENST00000541661 SEC11CQ9BY50 192 aa8.04□□□□□ -1.12
SCARB1-207ENST00000541661 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
SCARB1-207ENST00000541661 TRBV6-5A0A0K0K1A5 114 aa8.03□□□□□ -1.12
SCARB1-207ENST00000541661 ZNF561-AS1K7EIQ3 104 aa8.03□□□□□ -1.12
SCARB1-207ENST00000541661 PMCHP20382 165 aa8.03□□□□□ -1.12
SCARB1-207ENST00000541661 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
SCARB1-207ENST00000541661 PEA15Q15121 130 aa8.03□□□□□ -1.12
SCARB1-207ENST00000541661 SS18Q15532 418 aa8.03□□□□□ -1.12
SCARB1-207ENST00000541661 CD164L2Q6UWJ8 174 aa8.03□□□□□ -1.12
SCARB1-207ENST00000541661 SMIM15Q7Z3B0 74 aa8.03□□□□□ -1.12
SCARB1-207ENST00000541661 RPP21Q9H633 154 aaKnown RBP8.03□□□□□ -1.12
SCARB1-207ENST00000541661 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
SCARB1-207ENST00000541661 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
SCARB1-207ENST00000541661 CAMPP49913 170 aa8.02□□□□□ -1.13
SCARB1-207ENST00000541661 MRPL52Q86TS9 123 aaKnown RBP8.02□□□□□ -1.13
SCARB1-207ENST00000541661 RNASE7Q9H1E1 156 aaKnown RBP8.02□□□□□ -1.13
SCARB1-207ENST00000541661 CDC42SE2Q9NRR3 84 aa8.02□□□□□ -1.13
SCARB1-207ENST00000541661 K7EN84 100 aa8.01□□□□□ -1.13
SCARB1-207ENST00000541661 TSHBP01222 138 aa8.01□□□□□ -1.13
SCARB1-207ENST00000541661 SRSF3P84103 164 aaKnown RBP8.01□□□□□ -1.13
SCARB1-207ENST00000541661 GAGE2BQ13066 116 aa8.01□□□□□ -1.13
SCARB1-207ENST00000541661 ZNF664Q8N3J9 261 aa8.01□□□□□ -1.13
SCARB1-207ENST00000541661 ISOC2Q96AB3 205 aa8.01□□□□□ -1.13
SCARB1-207ENST00000541661 PSORS1C2Q9UIG4 136 aa8.01□□□□□ -1.13
SCARB1-207ENST00000541661 BCL2P10415 239 aa8□□□□□ -1.13
SCARB1-207ENST00000541661 NUP35Q8NFH5 326 aa8□□□□□ -1.13
SCARB1-207ENST00000541661 OCC1Q8TAD7 63 aa8□□□□□ -1.13
SCARB1-207ENST00000541661 MRAP2Q96G30 205 aa8□□□□□ -1.13
SCARB1-207ENST00000541661 IGLV4-69A0A075B6H9 119 aa7.99□□□□□ -1.13
SCARB1-207ENST00000541661 ADCYAP1P18509 176 aa7.99□□□□□ -1.13
SCARB1-207ENST00000541661 TAGLN2P37802 199 aaKnown RBP7.99□□□□□ -1.13
SCARB1-207ENST00000541661 SVBPQ8N300 66 aa7.99□□□□□ -1.13
SCARB1-207ENST00000541661 C1orf196B1AJZ1 125 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 C9JQL5 133 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 F8W036 122 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 APOC3P02656 99 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 MT-ND6P03923 174 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 POLR2KP53803 58 aaKnown RBP7.98□□□□□ -1.13
SCARB1-207ENST00000541661 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
SCARB1-207ENST00000541661 C2orf48Q96LS8 159 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 TMEM242Q9NWH2 141 aa7.98□□□□□ -1.13
SCARB1-207ENST00000541661 TRBV27A0A0K0K1C4 114 aa7.97□□□□□ -1.13
SCARB1-207ENST00000541661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.97□□□□□ -1.13
SCARB1-207ENST00000541661 APOMO95445 188 aa7.97□□□□□ -1.13
SCARB1-207ENST00000541661 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
SCARB1-207ENST00000541661 A8MWL6 223 aa7.96□□□□□ -1.14
SCARB1-207ENST00000541661 COX7A2LO14548 114 aa7.96□□□□□ -1.14
SCARB1-207ENST00000541661 GATCO43716 136 aaKnown RBP7.96□□□□□ -1.14
SCARB1-207ENST00000541661 SNAPINO95295 136 aa7.96□□□□□ -1.14
SCARB1-207ENST00000541661 MALP21145 153 aa7.96□□□□□ -1.14
SCARB1-207ENST00000541661 C1orf137Q5JT78 98 aa7.96□□□□□ -1.14
SCARB1-207ENST00000541661 FAM231DQ6ZW35 169 aa7.96□□□□□ -1.14
SCARB1-207ENST00000541661 CAMK2N2Q96S95 79 aa7.96□□□□□ -1.14
SCARB1-207ENST00000541661 CSDC2Q9Y534 153 aaKnown RBP7.96□□□□□ -1.14
SCARB1-207ENST00000541661 C7orf77A4D0Y5 90 aa7.95□□□□□ -1.14
SCARB1-207ENST00000541661 SRP19P09132 144 aaKnown RBP7.95□□□□□ -1.14
SCARB1-207ENST00000541661 RNF151Q2KHN1 245 aa7.95□□□□□ -1.14
SCARB1-207ENST00000541661 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
SCARB1-207ENST00000541661 MUC2Q02817 5179 aa7.94□□□□□ -1.14
SCARB1-207ENST00000541661 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
SCARB1-207ENST00000541661 CT83Q5H943 113 aa7.94□□□□□ -1.14
SCARB1-207ENST00000541661 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
SCARB1-207ENST00000541661 DIRC1Q969H9 104 aa7.94□□□□□ -1.14
SCARB1-207ENST00000541661 TMEM191AQ9H0A3 160 aa7.94□□□□□ -1.14
SCARB1-207ENST00000541661 SCO1O75880 301 aa7.93□□□□□ -1.14
SCARB1-207ENST00000541661 RAB4AP20338 218 aa7.93□□□□□ -1.14
SCARB1-207ENST00000541661 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
SCARB1-207ENST00000541661 TMEM250H0YL14 139 aa7.92□□□□□ -1.14
SCARB1-207ENST00000541661 VCYO14598 125 aa7.92□□□□□ -1.14
SCARB1-207ENST00000541661 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
SCARB1-207ENST00000541661 SMAGPQ0VAQ4 97 aa7.92□□□□□ -1.14
SCARB1-207ENST00000541661 BORCS7Q96B45 105 aa7.92□□□□□ -1.14
SCARB1-207ENST00000541661 OPRPNQ99935 248 aaPredicted RBP7.92□□□□□ -1.14
SCARB1-207ENST00000541661 A0A1B0GUT8 65 aa7.91□□□□□ -1.14
SCARB1-207ENST00000541661 H0Y9J4 135 aa7.91□□□□□ -1.14
SCARB1-207ENST00000541661 C5orf38Q86SI9 138 aa7.91□□□□□ -1.14
SCARB1-207ENST00000541661 TSKUQ8WUA8 353 aa7.91□□□□□ -1.14
SCARB1-207ENST00000541661 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 TRAV13-1A0A0B4J241 112 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 F8WDY8 70 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 FCER1GP30273 86 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 SPAG11BQ08648 103 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 RHEBQ15382 184 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 FAM74A3Q4VXF1 159 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 RNASE13Q5GAN3 156 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms