RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 CHAC1Q9BUX1 264 aa7.99□□□□□ -1.13
CLTCL1-205ENST00000538828 CDC42SE2Q9NRR3 84 aa7.99□□□□□ -1.13
CLTCL1-205ENST00000538828 LAMTOR2Q9Y2Q5 125 aa7.99□□□□□ -1.13
CLTCL1-205ENST00000538828 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
CLTCL1-205ENST00000538828 Q5VSD8 79 aa7.98□□□□□ -1.13
CLTCL1-205ENST00000538828 DEFB104AQ8WTQ1 72 aa7.98□□□□□ -1.13
CLTCL1-205ENST00000538828 IMMP2LQ96T52 175 aa7.98□□□□□ -1.13
CLTCL1-205ENST00000538828 AP5S1Q9NUS5 200 aa7.98□□□□□ -1.13
CLTCL1-205ENST00000538828 SRRM2Q9UQ35 2752 aaKnown RBP7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 SMKR1H3BMG3 65 aa7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 TNFRSF6BO95407 300 aa7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 IFITM2Q01629 132 aa7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 MRPL54Q6P161 138 aaKnown RBP7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 CHCHD10Q8WYQ3 142 aaPredicted RBP7.97□□□□□ -1.13
CLTCL1-205ENST00000538828 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 TMEM218A2RU14 115 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 ORMDL3Q8N138 153 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 ZNF664Q8N3J9 261 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 SMIM2Q9BVW6 85 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 CTDSP1Q9GZU7 261 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 UBE2D4Q9Y2X8 147 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.14
CLTCL1-205ENST00000538828 TRAV9-1A0A075B6T8 112 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 hDV102S1A0JD36 115 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 D6R8Y8 96 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 SS18Q15532 418 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 CD164L2Q6UWJ8 174 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 C15orf56Q8N910 161 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 SEC11CQ9BY50 192 aa7.95□□□□□ -1.14
CLTCL1-205ENST00000538828 DNAH8Q96JB1 4490 aa7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 GVQW2A0A096LPI5 108 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 C1orf196B1AJZ1 125 aa7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 PLA2G1BP04054 148 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 FOXI1Q12951 378 aa7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 CIRBPQ14011 172 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 TMEM136Q6ZRR5 245 aa7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
CLTCL1-205ENST00000538828 FAT1Q14517 4588 aa7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 K7EMI3 77 aa7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 NPYP01303 97 aa7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 SMR3BP02814 79 aaPredicted RBP7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 MRPS36P82909 103 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 LINC01620Q4KN68 170 aa7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 SPANXA1Q9NS26 97 aa7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
CLTCL1-205ENST00000538828 VPS13BQ7Z7G8 4022 aa7.92□□□□□ -1.14
CLTCL1-205ENST00000538828 IGHV3-64A0A075B6Q5 118 aa7.92□□□□□ -1.14
CLTCL1-205ENST00000538828 IGHV1-58A0A0C4DH39 117 aa7.92□□□□□ -1.14
CLTCL1-205ENST00000538828 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
CLTCL1-205ENST00000538828 PRELID3AQ96N28 172 aa7.92□□□□□ -1.14
CLTCL1-205ENST00000538828 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
CLTCL1-205ENST00000538828 SLPIP03973 132 aa7.91□□□□□ -1.14
CLTCL1-205ENST00000538828 ADCYAP1P18509 176 aa7.91□□□□□ -1.14
CLTCL1-205ENST00000538828 RAB5AP20339 215 aa7.91□□□□□ -1.14
CLTCL1-205ENST00000538828 PYGO1Q9Y3Y4 419 aa7.91□□□□□ -1.14
CLTCL1-205ENST00000538828 NPSP0C0P6 89 aa7.9□□□□□ -1.14
CLTCL1-205ENST00000538828 XCL1P47992 114 aa7.9□□□□□ -1.14
CLTCL1-205ENST00000538828 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
CLTCL1-205ENST00000538828 LINC00528Q8N1L1 170 aa7.9□□□□□ -1.14
CLTCL1-205ENST00000538828 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
CLTCL1-205ENST00000538828 G0S2P27469 103 aa7.89□□□□□ -1.15
CLTCL1-205ENST00000538828 HAMPP81172 84 aa7.89□□□□□ -1.15
CLTCL1-205ENST00000538828 COX19Q49B96 90 aa7.89□□□□□ -1.15
CLTCL1-205ENST00000538828 MAP1LC3AQ9H492 121 aa7.89□□□□□ -1.15
CLTCL1-205ENST00000538828 DMBT1Q9UGM3 2413 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-205ENST00000538828 Q8N8P6 123 aa7.88□□□□□ -1.15
CLTCL1-205ENST00000538828 CARHSP1Q9Y2V2 147 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-205ENST00000538828 F8WDY8 70 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 COX7A2LO14548 114 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 APOMO95445 188 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 IFI27P40305 119 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 RPL39P62891 51 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 ORMDL2Q53FV1 153 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 Q6ZUT4 128 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 COMMD7Q86VX2 200 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 FAM104AQ969W3 186 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 LINC00474Q9P2X8 69 aa7.87□□□□□ -1.15
CLTCL1-205ENST00000538828 LINC01549A6NIU2 74 aa7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 ZNF561-AS1K7EIQ3 104 aa7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 S100PP25815 95 aa7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 RHEBQ15382 184 aa7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 C2orf48Q96LS8 159 aa7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 GNB1LQ9BYB4 327 aa7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-205ENST00000538828 TRAV13-1A0A0B4J241 112 aa7.85□□□□□ -1.15
CLTCL1-205ENST00000538828 IGHV3OR16-9A0A0B4J2B5 98 aa7.85□□□□□ -1.15
CLTCL1-205ENST00000538828 MALP21145 153 aa7.85□□□□□ -1.15
CLTCL1-205ENST00000538828 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
CLTCL1-205ENST00000538828 PLAC8Q9NZF1 115 aa7.85□□□□□ -1.15
CLTCL1-205ENST00000538828 CYSLTR1Q9Y271 337 aa7.85□□□□□ -1.15
CLTCL1-205ENST00000538828 MT-ND6P03923 174 aa7.84□□□□□ -1.15
CLTCL1-205ENST00000538828 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-205ENST00000538828 OR10D4PQ8NGN7 298 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms